RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 CSF1RP07333 972 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 IFT88Q13099 833 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 ANKRD40Q6AI12 368 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 POTEBQ6S5H4 581 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 NYAP1Q6ZVC0 841 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 IMPG2Q9BZV3 1241 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 EHD2Q9NZN4 543 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 SAMD15Q9P1V8 674 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 BAIAP2L1Q9UHR4 511 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
VPS37A-202ENST00000425020 USP17L10C9JJH3 530 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 PTPAQ15257 358 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 ANKS4BQ8N8V4 417 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 KCNB2Q92953 911 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 MXD3Q9BW11 206 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
VPS37A-202ENST00000425020 MRFAP1Q9Y605 127 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 DUSP10Q9Y6W6 482 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 MORC2Q9Y6X9 1032 aaPredicted RBP11.22□□□□□ -0.61
VPS37A-202ENST00000425020 ABCC12Q96J65 1359 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 LGALS16A8MUM7 142 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 K7ENM7 598 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 TNNI1P19237 187 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 PLTPP55058 493 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 SNX1Q13596 522 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 NFIXQ14938 502 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 FAM102BQ5T8I3 360 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 GBP6Q6ZN66 633 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 LRRC45Q96CN5 670 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 MMS19Q96T76 1030 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 BPIFA3Q9BQP9 254 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 BRIP1Q9BX63 1249 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 COL4A3BPQ9Y5P4 624 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 DLC1Q96QB1 1528 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 PLA2G4BP0C869 781 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 GGCXP38435 758 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 GOLGA5Q8TBA6 731 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
VPS37A-202ENST00000425020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.22□□□□□ -0.61
VPS37A-202ENST00000425020 ARHGEF10LQ9HCE6 1279 aa11.22□□□□□ -0.61
VPS37A-202ENST00000425020 NPHP3-ACAD11A0A0J9YXS1 232 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 GOLGA8IPA6NC78 632 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 GOLGA8JA6NMD2 632 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 TTLL1O95922 423 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 GYPCP04921 128 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 CD19P15391 556 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 POTEEQ6S8J3 1075 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 ZNF365Q70YC5 407 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 ADGRA1Q86SQ6 560 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 DGKHQ86XP1 1220 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 MS4A14Q96JA4 679 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 CSRNP1Q96S65 589 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 ADD3Q9UEY8 706 aaKnown RBP11.21□□□□□ -0.61
VPS37A-202ENST00000425020 RABGAP1Q9Y3P9 1069 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 DEPDC5O75140 1603 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 A0A0U1RQJ8 604 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 TRIM66O15016 1216 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 CTIFO43310 598 aaKnown RBP11.21□□□□□ -0.61
VPS37A-202ENST00000425020 ACTN4O43707 911 aaKnown RBP11.21□□□□□ -0.61
VPS37A-202ENST00000425020 RAD17O75943 681 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 PRPHP41219 470 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 NCAPHQ15003 741 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 TRIP13Q15645 432 aaPredicted RBP11.21□□□□□ -0.61
VPS37A-202ENST00000425020 CCDC6Q16204 474 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 ZNF579Q8NAF0 562 aaKnown RBP11.21□□□□□ -0.61
VPS37A-202ENST00000425020 PPP1R14CQ8TAE6 165 aa11.21□□□□□ -0.61
VPS37A-202ENST00000425020 PALMO75781 387 aa11.21□□□□□ -0.62
VPS37A-202ENST00000425020 APBA3O96018 575 aa11.21□□□□□ -0.62
VPS37A-202ENST00000425020 ATP2B4P23634 1241 aa11.21□□□□□ -0.62
VPS37A-202ENST00000425020 ATP2C1P98194 919 aaPredicted RBP11.21□□□□□ -0.62
VPS37A-202ENST00000425020 TXNRD3Q86VQ6 643 aa11.21□□□□□ -0.62
VPS37A-202ENST00000425020 PSMD1Q99460 953 aa11.21□□□□□ -0.62
VPS37A-202ENST00000425020 STK38LQ9Y2H1 464 aa11.21□□□□□ -0.62
VPS37A-202ENST00000425020 MYOM1P52179 1685 aa11.21□□□□□ -0.62
VPS37A-202ENST00000425020 PLEKP08567 350 aaPredicted RBP11.2□□□□□ -0.62
VPS37A-202ENST00000425020 VEGFAP15692 232 aaPredicted RBP11.2□□□□□ -0.62
VPS37A-202ENST00000425020 NF2P35240 595 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 ITPK1Q13572 414 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 ALX1Q15699 326 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 ZKSCAN8Q15776 578 aaPredicted RBP11.2□□□□□ -0.62
VPS37A-202ENST00000425020 ABCB5Q2M3G0 1257 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 LRCH2Q5VUJ6 765 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 DNAAF5Q86Y56 855 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 CCDC63Q8NA47 563 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 RPGRIP1Q96KN7 1286 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 CCDC77Q9BR77 488 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 MED4Q9NPJ6 270 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 JRKLQ9Y4A0 524 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 STK36Q9NRP7 1315 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 NEBLO76041 1014 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 DLGAP5Q15398 846 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 KAZNQ674X7 775 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 MIER3Q7Z3K6 550 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 REXO1L1PQ8IX06 675 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 JDP2Q8WYK2 163 aa11.2□□□□□ -0.62
VPS37A-202ENST00000425020 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
VPS37A-202ENST00000425020 GCNT4Q9P109 453 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms