RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 DGKDQ16760 1214 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 STOX1Q6ZVD7 989 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 HERVK_113Q902F9 699 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 ESYT1Q9BSJ8 1104 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 SEC63Q9UGP8 760 aaKnown RBP23.65■■□□□ 1.38
PTPRU-203ENST00000415600 CCDC69A6NI79 296 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 ARIH2O95376 493 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 DNAJB2P25686 324 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 CCL23P55773 120 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 LY6KQ17RY6 165 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 CCDC155Q8N6L0 562 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 RETREG2Q8NC44 543 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 IGDCC4Q8TDY8 1250 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 AFG1LQ8WV93 481 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 EMID1Q96A84 441 aaPredicted RBP23.64■■□□□ 1.37
PTPRU-203ENST00000415600 RRP36Q96EU6 259 aaKnown RBP23.64■■□□□ 1.37
PTPRU-203ENST00000415600 CDX2Q99626 313 aaPredicted RBP23.64■■□□□ 1.37
PTPRU-203ENST00000415600 KATNAL1Q9BW62 490 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 ANO2Q9NQ90 1003 aa23.64■■□□□ 1.37
PTPRU-203ENST00000415600 TRMT13Q9NUP7 481 aaKnown RBP23.64■■□□□ 1.37
PTPRU-203ENST00000415600 MMP3P08254 477 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 CALM1P0DP23 149 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 CALM2P0DP24 149 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 CALM3P0DP25 149 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 MYCLP12524 364 aaPredicted RBP23.63■■□□□ 1.37
PTPRU-203ENST00000415600 SMARCA1P28370 1054 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 CCND2P30279 289 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 BFSP2Q13515 415 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 C16orf59Q7L2K0 433 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 ZNF654Q8IZM8 581 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 TIFAQ96CG3 184 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 PDCD2LQ9BRP1 358 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 MSRAQ9UJ68 235 aa23.63■■□□□ 1.37
PTPRU-203ENST00000415600 DDX41Q9UJV9 622 aaKnown RBP23.63■■□□□ 1.37
PTPRU-203ENST00000415600 LAMA2P24043 3122 aaKnown RBP23.63■■□□□ 1.37
PTPRU-203ENST00000415600 PRC1O43663 620 aa23.62■■□□□ 1.37
PTPRU-203ENST00000415600 PPP1R11O60927 126 aaPredicted RBP23.62■■□□□ 1.37
PTPRU-203ENST00000415600 TGFB3P10600 412 aa23.62■■□□□ 1.37
PTPRU-203ENST00000415600 HOXA13P31271 388 aaPredicted RBP23.62■■□□□ 1.37
PTPRU-203ENST00000415600 RFC2P35250 354 aa23.62■■□□□ 1.37
PTPRU-203ENST00000415600 CHMP4BP1P59074 171 aa23.62■■□□□ 1.37
PTPRU-203ENST00000415600 ARHGAP1Q07960 439 aa23.62■■□□□ 1.37
PTPRU-203ENST00000415600 RAB30Q15771 203 aa23.62■■□□□ 1.37
PTPRU-203ENST00000415600 RASIP1Q5U651 963 aa23.62■■□□□ 1.37
PTPRU-203ENST00000415600 CUL5Q93034 780 aa23.62■■□□□ 1.37
PTPRU-203ENST00000415600 LSG1Q9H089 658 aaKnown RBP23.62■■□□□ 1.37
PTPRU-203ENST00000415600 PITPNM1O00562 1244 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 ANTXR2P58335 489 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 DHX37Q8IY37 1157 aaKnown RBP23.61■■□□□ 1.37
PTPRU-203ENST00000415600 PPTC7Q8NI37 304 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 SPZ1Q9BXG8 430 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 LY9Q9HBG7 655 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 TAF6LQ9Y6J9 622 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 SCN10AQ9Y5Y9 1956 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 OPLAHO14841 1288 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 ACTN1P12814 892 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 GNPTABQ3T906 1256 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 VSIG10LQ86VR7 867 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 TTYH1Q9H313 450 aaPredicted RBP23.61■■□□□ 1.37
PTPRU-203ENST00000415600 SENP2Q9HC62 589 aa23.61■■□□□ 1.37
PTPRU-203ENST00000415600 COL6A3P12111 3177 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 SLC27A2O14975 620 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 CYTH3O43739 400 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 STAM2O75886 525 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 CYP2C9P11712 490 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 FOSL2P15408 326 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 LIFRP42702 1097 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 PGM5Q15124 567 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 FCHSD1Q86WN1 690 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 WNT8AQ9H1J5 351 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 UMODL1Q5DID0 1318 aa23.6■■□□□ 1.37
PTPRU-203ENST00000415600 CREB3L3Q68CJ9 461 aa23.59■■□□□ 1.37
PTPRU-203ENST00000415600 SYNE3Q6ZMZ3 975 aa23.59■■□□□ 1.37
PTPRU-203ENST00000415600 OTOP2Q7RTS6 562 aa23.59■■□□□ 1.37
PTPRU-203ENST00000415600 SESTD1Q86VW0 696 aa23.59■■□□□ 1.37
PTPRU-203ENST00000415600 C7orf31Q8N865 590 aa23.59■■□□□ 1.37
PTPRU-203ENST00000415600 ZNF576Q9H609 170 aa23.59■■□□□ 1.37
PTPRU-203ENST00000415600 DAXXQ9UER7 740 aaPredicted RBP23.59■■□□□ 1.37
PTPRU-203ENST00000415600 SLC12A7Q9Y666 1083 aa23.59■■□□□ 1.37
PTPRU-203ENST00000415600 SLC4A7Q9Y6M7 1214 aa23.59■■□□□ 1.37
PTPRU-203ENST00000415600 REC8O95072 547 aa23.58■■□□□ 1.37
PTPRU-203ENST00000415600 BECN1Q14457 450 aa23.58■■□□□ 1.37
PTPRU-203ENST00000415600 PTGISQ16647 500 aa23.58■■□□□ 1.37
PTPRU-203ENST00000415600 CAGE1Q8TC20 777 aa23.58■■□□□ 1.37
PTPRU-203ENST00000415600 KIAA1217Q5T5P2 1943 aa23.58■■□□□ 1.37
PTPRU-203ENST00000415600 ZBBXA8MT70 800 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 SH2B2O14492 632 aaPredicted RBP23.57■■□□□ 1.36
PTPRU-203ENST00000415600 PPFIA4O75335 1185 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 MAFAQ8NHW3 353 aaPredicted RBP23.57■■□□□ 1.36
PTPRU-203ENST00000415600 SMARCC2Q8TAQ2 1214 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 PIBF1Q8WXW3 757 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 SCLYQ96I15 445 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 BAZ2BQ9UIF8 2168 aaKnown RBP23.57■■□□□ 1.36
PTPRU-203ENST00000415600 NECTIN1Q15223 517 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 MYLIPQ8WY64 445 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 SPATA33Q96N06 139 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 USP26Q9BXU7 913 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 PBX4Q9BYU1 374 aa23.57■■□□□ 1.36
PTPRU-203ENST00000415600 PARNO95453 639 aaKnown RBP23.56■■□□□ 1.36
PTPRU-203ENST00000415600 SLC35G1Q2M3R5 365 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms