RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 KIF28PB7ZC32 967 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 FOSP01100 380 aaPredicted RBP14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 XBP1P17861 261 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 PTGS1P23219 599 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 MFSD14CQ5VZR4 134 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 EEPD1Q7L9B9 569 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 BICD2Q8TD16 824 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 IWS1Q96ST2 819 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 UNC93B1Q9H1C4 597 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 PDGFCQ9NRA1 345 aa14.2□□□□□ -0.14
HLA-DQB1-203ENST00000399082 KRT2P35908 639 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ARHGAP4P98171 946 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 PDE4DQ08499 809 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 SEMA3FQ13275 785 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ACVR2BQ13705 512 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 PCNX4Q63HM2 1172 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 SPRYD3Q8NCJ5 442 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 INPP4AQ96PE3 977 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ABHD16BQ9H3Z7 469 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 VTA1Q9NP79 307 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 NRBP1Q9UHY1 535 aa14.19□□□□□ -0.14
HLA-DQB1-203ENST00000399082 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 RBM47A0AV96 593 aaKnown RBP14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 POTEFA5A3E0 1075 aa14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 WNT7AO00755 349 aa14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ARIH2O95376 493 aa14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 MYCLP12524 364 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ITGB5P18084 799 aa14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 CCND2P30279 289 aa14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 TRIM29Q14134 588 aa14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 STXBP2Q15833 593 aa14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 CYP2W1Q8TAV3 490 aa14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 LENG1Q96BZ8 264 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 PAK6Q9NQU5 681 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ZHX1Q9UKY1 873 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 UBIAD1Q9Y5Z9 338 aa14.18□□□□□ -0.14
HLA-DQB1-203ENST00000399082 EIF3JO75822 258 aaKnown RBP14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 MYCP01106 439 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 CYP3A4P08684 503 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 CCL5P13501 91 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 SYT1P21579 422 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ADCYAP1R1P41586 468 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 NONOQ15233 471 aaKnown RBP eCLIP14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 CCDC144BQ3MJ40 725 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 GJC2Q5T442 439 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 LARP1BQ659C4 914 aaKnown RBP14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 MCTP2Q6DN12 878 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 XRRA1Q6P2D8 792 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 CCDC62Q6P9F0 684 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 PIK3AP1Q6ZUJ8 805 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 KRT25Q7Z3Z0 450 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 TBCKQ8TEA7 893 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 RTEL1Q9NZ71 1219 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 CNPY2Q9Y2B0 182 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 KIF3AQ9Y496 699 aa14.17□□□□□ -0.14
HLA-DQB1-203ENST00000399082 BRCA2P51587 3418 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 IGLV3-22A0A075B6J6 115 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 FAM86B1E9PN63 330 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 SEPT4O43236 478 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 FAM86B2P0C5J1 330 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 SMPD1P17405 629 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 U2AF2P26368 475 aaKnown RBP eCLIP14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 CIITAP33076 1130 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 INF2Q27J81 1249 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 LHX8Q68G74 356 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 LENG9Q96B70 501 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 WDR11Q9BZH6 1224 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 FOXP1Q9H334 677 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 HMX1Q9NP08 348 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 MTMR6Q9Y217 621 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 DOCK5Q9H7D0 1870 aa14.16□□□□□ -0.14
HLA-DQB1-203ENST00000399082 B4DLN1 442 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 TDP2O95551 362 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ICAM3P32942 547 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 SP2Q02086 613 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 PKP1Q13835 747 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 BECN1Q14457 450 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ANO1Q5XXA6 986 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 SEPT14Q6ZU15 432 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 COPS5Q92905 334 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 ABHD8Q96I13 439 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 MBOAT7Q96N66 472 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 MPHOSPH6Q99547 160 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 MXRA8Q9BRK3 442 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 BCAS3Q9H6U6 928 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 EHMT1Q9H9B1 1298 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 JADE2Q9NQC1 790 aa14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 GNEQ9Y223 722 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 RBM19Q9Y4C8 960 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-203ENST00000399082 CCDC194A0A1B0GVG4 234 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 SPATA31C2B4DYI2 1134 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MEIS1O00470 390 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 STAM2O75886 525 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ARP10275 920 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 AKR1A1P14550 325 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 CNGA1P29973 690 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms