RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 SEPT14Q6ZU15 432 aa22.34■■□□□ 1.17
CBWD3-204ENST00000377349 SESTD1Q86VW0 696 aa22.34■■□□□ 1.17
CBWD3-204ENST00000377349 NSUN6Q8TEA1 469 aaKnown RBP22.34■■□□□ 1.17
CBWD3-204ENST00000377349 UBAC1Q9BSL1 405 aa22.34■■□□□ 1.17
CBWD3-204ENST00000377349 MICAL3Q7RTP6 2002 aa22.34■■□□□ 1.17
CBWD3-204ENST00000377349 EPOPA6NHQ4 379 aa22.33■■□□□ 1.17
CBWD3-204ENST00000377349 GH1P01241 217 aa22.33■■□□□ 1.17
CBWD3-204ENST00000377349 GHRHRQ02643 423 aa22.33■■□□□ 1.17
CBWD3-204ENST00000377349 GDF6Q6KF10 455 aaPredicted RBP22.33■■□□□ 1.17
CBWD3-204ENST00000377349 STAG2Q8N3U4 1231 aa22.33■■□□□ 1.17
CBWD3-204ENST00000377349 RUFY2Q8WXA3 655 aa22.33■■□□□ 1.17
CBWD3-204ENST00000377349 DHX38Q92620 1227 aaKnown RBP22.33■■□□□ 1.17
CBWD3-204ENST00000377349 IWS1Q96ST2 819 aa22.33■■□□□ 1.17
CBWD3-204ENST00000377349 RMDN3Q96TC7 470 aa22.33■■□□□ 1.17
CBWD3-204ENST00000377349 KRT23Q9C075 422 aa22.33■■□□□ 1.17
CBWD3-204ENST00000377349 TNFRSF10AO00220 468 aa22.32■■□□□ 1.16
CBWD3-204ENST00000377349 SEC23AQ15436 765 aa22.32■■□□□ 1.16
CBWD3-204ENST00000377349 TMEM67Q5HYA8 995 aa22.32■■□□□ 1.16
CBWD3-204ENST00000377349 FBXO11Q86XK2 927 aa22.32■■□□□ 1.16
CBWD3-204ENST00000377349 SLC9A7Q96T83 725 aa22.32■■□□□ 1.16
CBWD3-204ENST00000377349 RBAK-RBAKDNI3L0D1 243 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 RFXAPO00287 272 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 PPP1R11O60927 126 aaPredicted RBP22.31■■□□□ 1.16
CBWD3-204ENST00000377349 PARP1P09874 1014 aaKnown RBP22.31■■□□□ 1.16
CBWD3-204ENST00000377349 ACTN1P12814 892 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 BFSP2Q13515 415 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 STXBP2Q15833 593 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 PTGISQ16647 500 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 MCF2L2Q86YR7 1114 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 RETREG2Q8NC44 543 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 PHOSPHO2Q8TCD6 241 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 MTMR8Q96EF0 704 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 CNNM2Q9H8M5 875 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 PXMP2Q9NR77 195 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 DDX41Q9UJV9 622 aaKnown RBP22.31■■□□□ 1.16
CBWD3-204ENST00000377349 MRPL11Q9Y3B7 192 aaKnown RBP22.31■■□□□ 1.16
CBWD3-204ENST00000377349 SIP14410 1827 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 EIF2AK2P19525 551 aaKnown RBP22.31■■□□□ 1.16
CBWD3-204ENST00000377349 POU3F3P20264 500 aaPredicted RBP22.31■■□□□ 1.16
CBWD3-204ENST00000377349 CHMLP26374 656 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 HSD17B4P51659 736 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 MRPS5P82675 430 aaKnown RBP22.31■■□□□ 1.16
CBWD3-204ENST00000377349 RBL2Q08999 1139 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 SLC35G1Q2M3R5 365 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 HERC6Q8IVU3 1022 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 EMID1Q96A84 441 aaPredicted RBP22.31■■□□□ 1.16
CBWD3-204ENST00000377349 VAT1LQ9HCJ6 419 aa22.31■■□□□ 1.16
CBWD3-204ENST00000377349 RGS20O76081 388 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 CHMP4BP1P59074 171 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 TRDNQ13061 729 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 CHST3Q7LGC8 479 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 SPRED2Q7Z698 418 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 CAGE1Q8TC20 777 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 ADAMTS19Q8TE59 1207 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 AFAP1L1Q8TED9 768 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 CERS4Q9HA82 394 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 GTF2IRD1Q9UHL9 959 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 NOD1Q9Y239 953 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 MTCH2Q9Y6C9 303 aa22.3■■□□□ 1.16
CBWD3-204ENST00000377349 EIF3JO75822 258 aaKnown RBP22.29■■□□□ 1.16
CBWD3-204ENST00000377349 NR3C2P08235 984 aa22.29■■□□□ 1.16
CBWD3-204ENST00000377349 PTH1RQ03431 593 aa22.29■■□□□ 1.16
CBWD3-204ENST00000377349 TAP1Q03518 808 aa22.29■■□□□ 1.16
CBWD3-204ENST00000377349 IFIT1BQ5T764 474 aaKnown RBP22.29■■□□□ 1.16
CBWD3-204ENST00000377349 ARHGEF16Q5VV41 709 aa22.29■■□□□ 1.16
CBWD3-204ENST00000377349 CYB5R4Q7L1T6 521 aa22.29■■□□□ 1.16
CBWD3-204ENST00000377349 FTOQ9C0B1 505 aaKnown RBP eCLIP22.29■■□□□ 1.16
CBWD3-204ENST00000377349 MAD2L2Q9UI95 211 aa22.29■■□□□ 1.16
CBWD3-204ENST00000377349 KAT6AQ92794 2004 aa22.29■■□□□ 1.16
CBWD3-204ENST00000377349 HAS3O00219 553 aa22.28■■□□□ 1.16
CBWD3-204ENST00000377349 BAIAP3O94812 1187 aa22.28■■□□□ 1.16
CBWD3-204ENST00000377349 CFBP00751 764 aa22.28■■□□□ 1.16
CBWD3-204ENST00000377349 HOXD8P13378 290 aaPredicted RBP22.28■■□□□ 1.16
CBWD3-204ENST00000377349 CASTP20810 708 aaKnown RBP22.28■■□□□ 1.16
CBWD3-204ENST00000377349 TCTN1Q2MV58 587 aa22.28■■□□□ 1.16
CBWD3-204ENST00000377349 HDAC6Q9UBN7 1215 aa22.28■■□□□ 1.16
CBWD3-204ENST00000377349 F2P00734 622 aa22.27■■□□□ 1.16
CBWD3-204ENST00000377349 DGKDQ16760 1214 aa22.27■■□□□ 1.16
CBWD3-204ENST00000377349 KRT40Q6A162 431 aa22.27■■□□□ 1.16
CBWD3-204ENST00000377349 TRAF7Q6Q0C0 670 aa22.27■■□□□ 1.16
CBWD3-204ENST00000377349 MICALL1Q8N3F8 863 aa22.27■■□□□ 1.16
CBWD3-204ENST00000377349 PPTC7Q8NI37 304 aa22.27■■□□□ 1.16
CBWD3-204ENST00000377349 WNT8BQ93098 351 aa22.27■■□□□ 1.16
CBWD3-204ENST00000377349 PDCD2LQ9BRP1 358 aa22.27■■□□□ 1.16
CBWD3-204ENST00000377349 AMNQ9BXJ7 453 aa22.27■■□□□ 1.16
CBWD3-204ENST00000377349 PALM3A6NDB9 673 aaPredicted RBP22.26■■□□□ 1.15
CBWD3-204ENST00000377349 KLRF2D3W0D1 207 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 NBNO60934 754 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 CXCL10P02778 98 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 ZNF286BP0CG31 522 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 SELPP16109 830 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 PSEN2P49810 448 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 WDR5P61964 334 aaKnown RBP22.26■■□□□ 1.15
CBWD3-204ENST00000377349 TFF2Q03403 129 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 HIC1Q14526 733 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 TRIM71Q2Q1W2 868 aaKnown RBP22.26■■□□□ 1.15
CBWD3-204ENST00000377349 STOX1Q6ZVD7 989 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 LRRC8DQ7L1W4 858 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 RALYLQ86SE5 291 aaKnown RBP22.26■■□□□ 1.15
CBWD3-204ENST00000377349 IL31RAQ8NI17 732 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms