RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 GCOM1H8Y6P7 765 aaPredicted RBP18.71■□□□□ 0.59
VMA21-202ENST00000370361 POLR2MP0CAP2 368 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 EIF2AK2P19525 551 aaKnown RBP18.71■□□□□ 0.59
VMA21-202ENST00000370361 KIF5BP33176 963 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 TMEM67Q5HYA8 995 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 AFG1LQ8WV93 481 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 TBC1D5Q92609 795 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 COPS5Q92905 334 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 GAS2L1Q99501 681 aaPredicted RBP18.71■□□□□ 0.59
VMA21-202ENST00000370361 LZTS2Q9BRK4 669 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 PDCD2LQ9BRP1 358 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 DDX41Q9UJV9 622 aaKnown RBP18.71■□□□□ 0.59
VMA21-202ENST00000370361 SLC4A7Q9Y6M7 1214 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 A0A0C4DFX4 3053 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 UMODL1Q5DID0 1318 aa18.71■□□□□ 0.59
VMA21-202ENST00000370361 OPLAHO14841 1288 aa18.7■□□□□ 0.58
VMA21-202ENST00000370361 DDAH1O94760 285 aa18.7■□□□□ 0.58
VMA21-202ENST00000370361 GNAQP50148 359 aa18.7■□□□□ 0.58
VMA21-202ENST00000370361 LY6KQ17RY6 165 aa18.7■□□□□ 0.58
VMA21-202ENST00000370361 CASC1Q6TDU7 716 aa18.7■□□□□ 0.58
VMA21-202ENST00000370361 OTOP2Q7RTS6 562 aa18.7■□□□□ 0.58
VMA21-202ENST00000370361 AFAP1L1Q8TED9 768 aa18.7■□□□□ 0.58
VMA21-202ENST00000370361 TANC1Q9C0D5 1861 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 CYP2C9P11712 490 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 HOXD8P13378 290 aaPredicted RBP18.69■□□□□ 0.58
VMA21-202ENST00000370361 CCND2P30279 289 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 RBL2Q08999 1139 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 GRIN2CQ14957 1233 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 GNPTABQ3T906 1256 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 VSIG10LQ86VR7 867 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 MB21D2Q8IYB1 491 aaPredicted RBP18.69■□□□□ 0.58
VMA21-202ENST00000370361 CTCFLQ8NI51 663 aaPredicted RBP18.69■□□□□ 0.58
VMA21-202ENST00000370361 PHOSPHO2Q8TCD6 241 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 TMEM87BQ96K49 555 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 SPZ1Q9BXG8 430 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 SLC28A3Q9HAS3 691 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 PCDHA11Q9Y5I1 949 aa18.69■□□□□ 0.58
VMA21-202ENST00000370361 RBM8AQ9Y5S9 174 aaKnown RBP18.69■□□□□ 0.58
VMA21-202ENST00000370361 CDH23Q9H251 3354 aa18.68■□□□□ 0.58
VMA21-202ENST00000370361 PPP1R11O60927 126 aaPredicted RBP18.68■□□□□ 0.58
VMA21-202ENST00000370361 PPFIA4O75335 1185 aa18.68■□□□□ 0.58
VMA21-202ENST00000370361 BAIAP3O94812 1187 aa18.68■□□□□ 0.58
VMA21-202ENST00000370361 F2P00734 622 aa18.68■□□□□ 0.58
VMA21-202ENST00000370361 PGM5Q15124 567 aa18.68■□□□□ 0.58
VMA21-202ENST00000370361 PTGISQ16647 500 aa18.68■□□□□ 0.58
VMA21-202ENST00000370361 HOMER1Q86YM7 354 aa18.68■□□□□ 0.58
VMA21-202ENST00000370361 DHX37Q8IY37 1157 aaKnown RBP18.68■□□□□ 0.58
VMA21-202ENST00000370361 IGDCC4Q8TDY8 1250 aa18.68■□□□□ 0.58
VMA21-202ENST00000370361 SLC9A7Q96T83 725 aa18.68■□□□□ 0.58
VMA21-202ENST00000370361 CXXC1Q9P0U4 656 aaPredicted RBP18.68■□□□□ 0.58
VMA21-202ENST00000370361 IQCF3P0C7M6 154 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 CALM1P0DP23 149 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 CALM2P0DP24 149 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 CALM3P0DP25 149 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 ATP2A2P16615 1042 aaKnown RBP18.67■□□□□ 0.58
VMA21-202ENST00000370361 MCM5P33992 734 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 XRRA1Q6P2D8 792 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 C7orf31Q8N865 590 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 RRP36Q96EU6 259 aaKnown RBP18.67■□□□□ 0.58
VMA21-202ENST00000370361 SCLYQ96I15 445 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 PIGSQ96S52 555 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 SEC63Q9UGP8 760 aaKnown RBP18.67■□□□□ 0.58
VMA21-202ENST00000370361 GTF2IRD1Q9UHL9 959 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 FRMPD4Q14CM0 1322 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 UNC80Q8N2C7 3258 aa18.67■□□□□ 0.58
VMA21-202ENST00000370361 CUL9Q8IWT3 2517 aa18.66■□□□□ 0.58
VMA21-202ENST00000370361 ZBBXA8MT70 800 aa18.66■□□□□ 0.58
VMA21-202ENST00000370361 CYTH3O43739 400 aa18.66■□□□□ 0.58
VMA21-202ENST00000370361 PBX2P40425 430 aa18.66■□□□□ 0.58
VMA21-202ENST00000370361 CELF3Q5SZQ8 465 aaKnown RBP18.66■□□□□ 0.58
VMA21-202ENST00000370361 TEX2Q8IWB9 1127 aa18.66■□□□□ 0.58
VMA21-202ENST00000370361 ZNF654Q8IZM8 581 aa18.66■□□□□ 0.58
VMA21-202ENST00000370361 SYMPKQ92797 1274 aaKnown RBP18.66■□□□□ 0.58
VMA21-202ENST00000370361 CUL5Q93034 780 aa18.66■□□□□ 0.58
VMA21-202ENST00000370361 GRXCR1A8MXD5 290 aa18.65■□□□□ 0.58
VMA21-202ENST00000370361 MYCLP12524 364 aaPredicted RBP18.65■□□□□ 0.58
VMA21-202ENST00000370361 LIFRP42702 1097 aa18.65■□□□□ 0.58
VMA21-202ENST00000370361 ANTXR2P58335 489 aa18.65■□□□□ 0.58
VMA21-202ENST00000370361 RNF20Q5VTR2 975 aa18.65■□□□□ 0.58
VMA21-202ENST00000370361 MYSM1Q5VVJ2 828 aa18.65■□□□□ 0.58
VMA21-202ENST00000370361 CHST3Q7LGC8 479 aa18.65■□□□□ 0.58
VMA21-202ENST00000370361 KAT2BQ92831 832 aa18.65■□□□□ 0.58
VMA21-202ENST00000370361 LY9Q9HBG7 655 aa18.65■□□□□ 0.58
VMA21-202ENST00000370361 CCDC69A6NI79 296 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 KIF28PB7ZC32 967 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 HAS3O00219 553 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 PIK3CDO00329 1044 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 EFCAB14O75071 495 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 SELPP16109 830 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 HOXA13P31271 388 aaPredicted RBP18.64■□□□□ 0.57
VMA21-202ENST00000370361 PSEN2P49810 448 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 PTK7Q13308 1070 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 NEDD9Q14511 834 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 MFSD10Q14728 455 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 DEFB128Q7Z7B8 93 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 SPATA33Q96N06 139 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 ESYT1Q9BSJ8 1104 aa18.64■□□□□ 0.57
VMA21-202ENST00000370361 PRC1O43663 620 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 RGS20O76081 388 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 GGPS1O95749 300 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms