RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 KIAA1217Q5T5P2 1943 aa20.55■□□□□ 0.88
CMTM1-204ENST00000336328 DDAH1O94760 285 aa20.54■□□□□ 0.88
CMTM1-204ENST00000336328 MYCLP12524 364 aaPredicted RBP20.54■□□□□ 0.88
CMTM1-204ENST00000336328 RFC2P35250 354 aa20.54■□□□□ 0.88
CMTM1-204ENST00000336328 BFSP2Q13515 415 aa20.54■□□□□ 0.88
CMTM1-204ENST00000336328 RAB30Q15771 203 aa20.54■□□□□ 0.88
CMTM1-204ENST00000336328 TIFAQ96CG3 184 aa20.54■□□□□ 0.88
CMTM1-204ENST00000336328 PITPNM1O00562 1244 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 OPLAHO14841 1288 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 PPP1R11O60927 126 aaPredicted RBP20.53■□□□□ 0.88
CMTM1-204ENST00000336328 MMP3P08254 477 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 CALM1P0DP23 149 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 CALM2P0DP24 149 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 CALM3P0DP25 149 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 CCND2P30279 289 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 ARHGAP1Q07960 439 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 RNF20Q5VTR2 975 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 NFXL1Q6ZNB6 911 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 CENPQQ7L2Z9 268 aaPredicted RBP20.53■□□□□ 0.88
CMTM1-204ENST00000336328 CCDC155Q8N6L0 562 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 RRP36Q96EU6 259 aaKnown RBP20.53■□□□□ 0.88
CMTM1-204ENST00000336328 ESYT1Q9BSJ8 1104 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 KATNAL1Q9BW62 490 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 ZNF576Q9H609 170 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 MYO9BQ13459 2157 aa20.53■□□□□ 0.88
CMTM1-204ENST00000336328 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 PPFIA4O75335 1185 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 STAM2O75886 525 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 CYP2C9P11712 490 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 ACTN1P12814 892 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 ANTXR2P58335 489 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 CHMP4BP1P59074 171 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 PGM5Q15124 567 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 OTOP2Q7RTS6 562 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 ZNF654Q8IZM8 581 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 LSG1Q9H089 658 aaKnown RBP20.52■□□□□ 0.88
CMTM1-204ENST00000336328 WNT8AQ9H1J5 351 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 SENP2Q9HC62 589 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 SEC63Q9UGP8 760 aaKnown RBP20.52■□□□□ 0.88
CMTM1-204ENST00000336328 SLC4A7Q9Y6M7 1214 aa20.52■□□□□ 0.88
CMTM1-204ENST00000336328 UMODL1Q5DID0 1318 aa20.52■□□□□ 0.87
CMTM1-204ENST00000336328 DLL1O00548 723 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 PRC1O43663 620 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 CYTH3O43739 400 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 FOSL2P15408 326 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 HOXA13P31271 388 aaPredicted RBP20.51■□□□□ 0.87
CMTM1-204ENST00000336328 LIFRP42702 1097 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 PTGISQ16647 500 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 GNPTABQ3T906 1256 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 BMP2KLQ5H9B9 411 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 SESTD1Q86VW0 696 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 FCHSD1Q86WN1 690 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 PPTC7Q8NI37 304 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 MYLIPQ8WY64 445 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 CUL5Q93034 780 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 SPZ1Q9BXG8 430 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 LY9Q9HBG7 655 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 TAF6LQ9Y6J9 622 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 MYH7BA7E2Y1 1941 aa20.51■□□□□ 0.87
CMTM1-204ENST00000336328 SLC27A2O14975 620 aa20.5■□□□□ 0.87
CMTM1-204ENST00000336328 PARNO95453 639 aaKnown RBP20.5■□□□□ 0.87
CMTM1-204ENST00000336328 NECTIN1Q15223 517 aa20.5■□□□□ 0.87
CMTM1-204ENST00000336328 C7orf31Q8N865 590 aa20.5■□□□□ 0.87
CMTM1-204ENST00000336328 MAFAQ8NHW3 353 aaPredicted RBP20.5■□□□□ 0.87
CMTM1-204ENST00000336328 CAGE1Q8TC20 777 aa20.5■□□□□ 0.87
CMTM1-204ENST00000336328 SCLYQ96I15 445 aa20.5■□□□□ 0.87
CMTM1-204ENST00000336328 PBX4Q9BYU1 374 aa20.5■□□□□ 0.87
CMTM1-204ENST00000336328 ANO2Q9NQ90 1003 aa20.5■□□□□ 0.87
CMTM1-204ENST00000336328 CELF3Q5SZQ8 465 aaKnown RBP20.49■□□□□ 0.87
CMTM1-204ENST00000336328 MYSM1Q5VVJ2 828 aa20.49■□□□□ 0.87
CMTM1-204ENST00000336328 CREB3L3Q68CJ9 461 aa20.49■□□□□ 0.87
CMTM1-204ENST00000336328 SYNE3Q6ZMZ3 975 aa20.49■□□□□ 0.87
CMTM1-204ENST00000336328 MLXIPQ9HAP2 919 aa20.49■□□□□ 0.87
CMTM1-204ENST00000336328 SLC28A3Q9HAS3 691 aa20.49■□□□□ 0.87
CMTM1-204ENST00000336328 SLC12A7Q9Y666 1083 aa20.49■□□□□ 0.87
CMTM1-204ENST00000336328 COL6A3P12111 3177 aa20.48■□□□□ 0.87
CMTM1-204ENST00000336328 LAMA2P24043 3122 aaKnown RBP20.48■□□□□ 0.87
CMTM1-204ENST00000336328 ZBBXA8MT70 800 aa20.48■□□□□ 0.87
CMTM1-204ENST00000336328 GRXCR1A8MXD5 290 aa20.48■□□□□ 0.87
CMTM1-204ENST00000336328 IQCF3P0C7M6 154 aa20.48■□□□□ 0.87
CMTM1-204ENST00000336328 GRIN2CQ14957 1233 aa20.48■□□□□ 0.87
CMTM1-204ENST00000336328 SLC35G1Q2M3R5 365 aa20.48■□□□□ 0.87
CMTM1-204ENST00000336328 XRRA1Q6P2D8 792 aa20.48■□□□□ 0.87
CMTM1-204ENST00000336328 SMARCC2Q8TAQ2 1214 aa20.48■□□□□ 0.87
CMTM1-204ENST00000336328 SPATA33Q96N06 139 aa20.48■□□□□ 0.87
CMTM1-204ENST00000336328 GAS2L1Q99501 681 aaPredicted RBP20.48■□□□□ 0.87
CMTM1-204ENST00000336328 FTOQ9C0B1 505 aaKnown RBP eCLIP20.48■□□□□ 0.87
CMTM1-204ENST00000336328 CXXC1Q9P0U4 656 aaPredicted RBP20.48■□□□□ 0.87
CMTM1-204ENST00000336328 SH2B2O14492 632 aaPredicted RBP20.47■□□□□ 0.87
CMTM1-204ENST00000336328 PSEN2P49810 448 aa20.47■□□□□ 0.87
CMTM1-204ENST00000336328 NEDD9Q14511 834 aa20.47■□□□□ 0.87
CMTM1-204ENST00000336328 DEFB128Q7Z7B8 93 aa20.47■□□□□ 0.87
CMTM1-204ENST00000336328 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.47■□□□□ 0.87
CMTM1-204ENST00000336328 AFAP1L1Q8TED9 768 aa20.47■□□□□ 0.87
CMTM1-204ENST00000336328 PIBF1Q8WXW3 757 aa20.47■□□□□ 0.87
CMTM1-204ENST00000336328 KAT2BQ92831 832 aa20.47■□□□□ 0.87
CMTM1-204ENST00000336328 RGS20O76081 388 aa20.46■□□□□ 0.87
CMTM1-204ENST00000336328 GGPS1O95749 300 aa20.46■□□□□ 0.87
CMTM1-204ENST00000336328 HOXD8P13378 290 aaPredicted RBP20.46■□□□□ 0.87
CMTM1-204ENST00000336328 PBX2P40425 430 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms