RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 GFPT1Q06210 699 aaPredicted RBP13.36□□□□□ -0.27
NLRC3-201ENST00000324659 RNF187Q5TA31 235 aaPredicted RBP13.36□□□□□ -0.27
NLRC3-201ENST00000324659 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 CREG2Q8IUH2 290 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 SH3RF3Q8TEJ3 882 aaPredicted RBP13.36□□□□□ -0.27
NLRC3-201ENST00000324659 DHTKD1Q96HY7 919 aaPredicted RBP13.36□□□□□ -0.27
NLRC3-201ENST00000324659 FAM107BQ9H098 131 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 VIPAS39Q9H9C1 493 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 SLC24A3Q9HC58 644 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 ARPP21Q9UBL0 812 aaPredicted RBP13.36□□□□□ -0.27
NLRC3-201ENST00000324659 SNX12Q9UMY4 172 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 LRP5O75197 1615 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 BICDL2A1A5D9 508 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 LRRC53A6NM62 1247 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 ZEB2O60315 1214 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 OR52Z1P0C646 297 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 USP17L2Q6R6M4 530 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 TEX11Q8IYF3 940 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 SH2D3CQ8N5H7 860 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 KIAA0895Q8NCT3 520 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 GLIS3Q8NEA6 775 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 IFT81Q8WYA0 676 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 SEMA6BQ9H3T3 888 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 TMEM260Q9NX78 707 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
NLRC3-201ENST00000324659 ZSCAN5CA6NGD5 496 aaPredicted RBP13.35□□□□□ -0.27
NLRC3-201ENST00000324659 SSBP05455 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
NLRC3-201ENST00000324659 FGRP09769 529 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 GTF2IP78347 998 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 IQCEQ6IPM2 695 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 CACNA2D4Q7Z3S7 1137 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 POTEDQ86YR6 584 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 SPATA4Q8NEY3 305 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 NUP58Q9BVL2 599 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 CACNA1SQ13698 1873 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 DISP2A7MBM2 1401 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 SMCO2A6NFE2 343 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 STXBP3O00186 592 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 RPS6KA5O75582 802 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 GNGT1P63211 74 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 APBA1Q02410 837 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
NLRC3-201ENST00000324659 GRIK5Q16478 980 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 DOK7Q18PE1 504 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 MFSD14BQ5SR56 506 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 SWT1Q5T5J6 900 aaKnown RBP13.35□□□□□ -0.27
NLRC3-201ENST00000324659 FAM114A1Q8IWE2 563 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 CCDC170Q8IYT3 715 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 GJA10Q969M2 543 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 OSBPL9Q96SU4 736 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 CD248Q9HCU0 757 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 ATP8A2Q9NTI2 1148 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 TBC1D7Q9P0N9 293 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 SALL4Q9UJQ4 1053 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 FAM184BQ9ULE4 1060 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 TARSL2A2RTX5 802 aaKnown RBP13.35□□□□□ -0.27
NLRC3-201ENST00000324659 MAGEA1P43355 309 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 SCNN1DP51172 638 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 SPTY2D1Q68D10 685 aaPredicted RBP13.35□□□□□ -0.27
NLRC3-201ENST00000324659 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 MSL3Q8N5Y2 521 aaKnown RBP13.35□□□□□ -0.27
NLRC3-201ENST00000324659 OTUD6BQ8N6M0 293 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
NLRC3-201ENST00000324659 TRIM58Q8NG06 486 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 CDK5RAP3Q96JB5 506 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 RPGRIP1Q96KN7 1286 aa13.35□□□□□ -0.27
NLRC3-201ENST00000324659 PACSIN2Q9UNF0 486 aaPredicted RBP13.35□□□□□ -0.27
NLRC3-201ENST00000324659 NEBLO76041 1014 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 PCP11498 1178 aaKnown RBP13.34□□□□□ -0.27
NLRC3-201ENST00000324659 ZNF804AQ7Z570 1209 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 ARL8AQ96BM9 186 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 CCSER1Q9C0I3 900 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 NDST4Q9H3R1 872 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 FLT1P17948 1338 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 POTEMA6NI47 508 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 GUCY2FP51841 1108 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 TBCKQ8TEA7 893 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 ALS2CR12Q96Q35 445 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 CAPS2Q9BXY5 557 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 SH2D4AQ9H788 454 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 BARHL2Q9NY43 387 aa13.34□□□□□ -0.27
NLRC3-201ENST00000324659 ANO9A1A5B4 782 aa13.33□□□□□ -0.27
NLRC3-201ENST00000324659 PDE6BP35913 854 aa13.33□□□□□ -0.27
NLRC3-201ENST00000324659 SLC1A4P43007 532 aa13.33□□□□□ -0.27
NLRC3-201ENST00000324659 IRAK1P51617 712 aa13.33□□□□□ -0.27
NLRC3-201ENST00000324659 IKQ13123 557 aaPredicted RBP13.33□□□□□ -0.27
NLRC3-201ENST00000324659 C8orf74Q6P047 294 aa13.33□□□□□ -0.27
NLRC3-201ENST00000324659 CALML4Q96GE6 196 aa13.33□□□□□ -0.27
NLRC3-201ENST00000324659 RBM12Q9NTZ6 932 aaKnown RBP13.33□□□□□ -0.27
NLRC3-201ENST00000324659 NDUFAB1O14561 156 aa13.33□□□□□ -0.28
NLRC3-201ENST00000324659 FTCDO95954 541 aa13.33□□□□□ -0.28
NLRC3-201ENST00000324659 KRT14P02533 472 aa13.33□□□□□ -0.28
NLRC3-201ENST00000324659 PDCLQ13371 301 aa13.33□□□□□ -0.28
NLRC3-201ENST00000324659 NONOQ15233 471 aaKnown RBP eCLIP13.33□□□□□ -0.28
NLRC3-201ENST00000324659 VWA3BQ502W6 1294 aa13.33□□□□□ -0.28
NLRC3-201ENST00000324659 KCNV1Q6PIU1 500 aa13.33□□□□□ -0.28
NLRC3-201ENST00000324659 NOC3LQ8WTT2 800 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms