RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 RASSF7Q02833 373 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 GABPAQ06546 454 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 RBL2Q08999 1139 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 GPR162Q16538 588 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 TRIM50Q86XT4 487 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 TSC1Q92574 1164 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 HAUS1Q96CS2 278 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 KRT12Q99456 494 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 COA1Q9GZY4 146 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 RAD17O75943 681 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 HOXA7P31268 230 aaPredicted RBP17.41■□□□□ 0.38
USP42-201ENST00000306177 ENOX1Q8TC92 643 aaKnown RBP17.41■□□□□ 0.38
USP42-201ENST00000306177 PCDHB6Q9Y5E3 794 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 NRKQ7Z2Y5 1582 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 FAM186BQ8IYM0 893 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 SLC7A3Q8WY07 619 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 MCUR1Q96AQ8 359 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 MKRN1Q9UHC7 482 aaKnown RBP17.41■□□□□ 0.38
USP42-201ENST00000306177 GOLGA8KD6RF30 607 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 CAPN9O14815 690 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 CYP2E1P05181 493 aaPredicted RBP17.41■□□□□ 0.38
USP42-201ENST00000306177 CDK8P49336 464 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 LRRC41Q15345 812 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 CCDC93Q567U6 631 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 DGKHQ86XP1 1220 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 CTAGE3PQ8IX95 158 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 ANKRD13CQ8N6S4 541 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 AIFM3Q96NN9 605 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 ACCSQ96QU6 501 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 JPH2Q9BR39 696 aaPredicted RBP17.41■□□□□ 0.38
USP42-201ENST00000306177 USP17L3A6NCW0 530 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 USP17L4A6NCW7 530 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 SEPT2Q15019 361 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 USP17L1Q7RTZ2 530 aa17.41■□□□□ 0.38
USP42-201ENST00000306177 TYW1Q9NV66 732 aaKnown RBP17.41■□□□□ 0.38
USP42-201ENST00000306177 PALM3A6NDB9 673 aaPredicted RBP17.4■□□□□ 0.38
USP42-201ENST00000306177 STX2P32856 288 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 CDC23Q9UJX2 597 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 CD2APQ9Y5K6 639 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 SH3BP5O60239 455 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 BSPRYQ5W0U4 402 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 TMED8Q6PL24 325 aaPredicted RBP17.4■□□□□ 0.38
USP42-201ENST00000306177 SDCCAG8Q86SQ7 713 aaPredicted RBP17.4■□□□□ 0.38
USP42-201ENST00000306177 STAG1Q8WVM7 1258 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 ISCA1Q9BUE6 129 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 DPH5Q9H2P9 285 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 RNF40O75150 1001 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 SLC12A2P55011 1212 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 CCNA1P78396 465 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 EHHADHQ08426 723 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 ARL6IP4Q66PJ3 421 aaKnown RBP17.4■□□□□ 0.38
USP42-201ENST00000306177 ARHGAP24Q8N264 748 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 RNF169Q8NCN4 708 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 ADD3Q9UEY8 706 aaKnown RBP17.4■□□□□ 0.38
USP42-201ENST00000306177 MINPP1Q9UNW1 487 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 CAMSAP1Q5T5Y3 1602 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 PPARDQ03181 441 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 SUPT20HL1Q3ZLR7 823 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 CDHR1Q96JP9 859 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 TMEM206Q9H813 350 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 HOMER3Q9NSC5 361 aa17.4■□□□□ 0.38
USP42-201ENST00000306177 HGSO14964 777 aaPredicted RBP17.39■□□□□ 0.38
USP42-201ENST00000306177 IGBP1P78318 339 aa17.39■□□□□ 0.38
USP42-201ENST00000306177 PNMA6FA0A0J9YX94 578 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 PSMD2Q13200 908 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 PDZD4Q76G19 769 aaPredicted RBP17.39■□□□□ 0.37
USP42-201ENST00000306177 ANKRD42Q8N9B4 389 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 BBOF1Q8ND07 529 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 RNF8O76064 485 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 GBP1P32455 592 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
USP42-201ENST00000306177 MIS18BP1Q6P0N0 1132 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 FOXP4Q8IVH2 680 aaPredicted RBP17.39■□□□□ 0.37
USP42-201ENST00000306177 CACNA2D3Q8IZS8 1091 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 SLC35F6Q8N357 371 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 KMT5AQ9NQR1 393 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 SH3GLB2Q9NR46 395 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 CDC37Q16543 378 aaPredicted RBP17.39■□□□□ 0.37
USP42-201ENST00000306177 THAP9Q9H5L6 903 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 ARHGEF40Q8TER5 1519 aa17.39■□□□□ 0.37
USP42-201ENST00000306177 CCNE1P24864 410 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 VPS41P49754 854 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 MASTLQ96GX5 879 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 BEGAINQ9BUH8 593 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 PFDN4Q9NQP4 134 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 PRDX5P30044 214 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 CDC25AP30304 524 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 ANKRD20A3Q5VUR7 823 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 MGARPQ8TDB4 240 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 RABGGTAQ92696 567 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 PAGE5Q96GU1 130 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 RUNDC3BQ96NL0 473 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 PLCG1P19174 1290 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 ABCD1P33897 745 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 ADAT2Q7Z6V5 191 aaKnown RBP17.38■□□□□ 0.37
USP42-201ENST00000306177 PPRC1Q5VV67 1664 aaKnown RBP17.38■□□□□ 0.37
USP42-201ENST00000306177 PASKQ96RG2 1323 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 MYO1FO00160 1098 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 CCND2P30279 289 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms