RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 CALM1P0DP23 149 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 CALM2P0DP24 149 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 CALM3P0DP25 149 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 TXNP10599 105 aaKnown RBP18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 GNAQP50148 359 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 LRIT3Q3SXY7 679 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 APOA5Q6Q788 366 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 SAMD3Q8N6K7 520 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 MYL10Q9BUA6 226 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 SEZ6LQ9BYH1 1024 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 POLR3EQ9NVU0 708 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 CIZ1Q9ULV3 898 aaPredicted RBP18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 NID2Q14112 1375 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 KIAA0355O15063 1070 aa18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 PPP1R11O60927 126 aaPredicted RBP18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 EIF2AK2P19525 551 aaKnown RBP18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 PTGS1P23219 599 aa18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 FAAP100Q0VG06 881 aa18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 SYNE3Q6ZMZ3 975 aa18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 RRP36Q96EU6 259 aaKnown RBP18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 LZTS2Q9BRK4 669 aa18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 CHMP5Q9NZZ3 219 aa18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 SEC63Q9UGP8 760 aaKnown RBP18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 SLC12A7Q9Y666 1083 aa18.46■□□□□ 0.55
SRGAP2C-201ENST00000304465 CDK7P50613 346 aa18.46■□□□□ 0.54
SRGAP2C-201ENST00000304465 HSD17B4P51659 736 aa18.46■□□□□ 0.54
SRGAP2C-201ENST00000304465 ITGA7Q13683 1181 aa18.46■□□□□ 0.54
SRGAP2C-201ENST00000304465 TMEM63BQ5T3F8 832 aa18.46■□□□□ 0.54
SRGAP2C-201ENST00000304465 SEPT14Q6ZU15 432 aa18.46■□□□□ 0.54
SRGAP2C-201ENST00000304465 NCOA5Q9HCD5 579 aaKnown RBP18.46■□□□□ 0.54
SRGAP2C-201ENST00000304465 FAM217BQ9NTX9 383 aaPredicted RBP18.46■□□□□ 0.54
SRGAP2C-201ENST00000304465 COL20A1Q9P218 1284 aa18.46■□□□□ 0.54
SRGAP2C-201ENST00000304465 LCTP09848 1927 aa18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 LRRC37A2A6NM11 1700 aa18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 GCOM1H8Y6P7 765 aaPredicted RBP18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 SOX1O00570 391 aaPredicted RBP18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 CYTH3O43739 400 aa18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 MYL3P08590 195 aa18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 POLR2MP0CAP2 368 aa18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 CCT2P78371 535 aaKnown RBP18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 NSUN7Q8NE18 718 aaKnown RBP18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 SMARCC2Q8TAQ2 1214 aa18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 LRCH3Q96II8 777 aa18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 SPZ1Q9BXG8 430 aa18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 PXMP2Q9NR77 195 aa18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.45■□□□□ 0.54
SRGAP2C-201ENST00000304465 GOLGA8BA8MQT2 603 aa18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 EIF3JO75822 258 aaKnown RBP18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 NR3C2P08235 984 aa18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 SMARCA1P28370 1054 aa18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 HOXA13P31271 388 aaPredicted RBP18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 FPGSQ05932 587 aa18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 PKP1Q13835 747 aa18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 RAB11FIP4Q86YS3 637 aa18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 ZDHHC9Q9Y397 364 aa18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 RANBP2P49792 3224 aaKnown RBP18.44■□□□□ 0.54
SRGAP2C-201ENST00000304465 OPLAHO14841 1288 aa18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 JAK2O60674 1132 aa18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 KPNA6O60684 536 aa18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 MYCLP12524 364 aaPredicted RBP18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 GHRHRQ02643 423 aa18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 SLC35G1Q2M3R5 365 aa18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 FCHSD1Q86WN1 690 aa18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 FAM126BQ8IXS8 530 aa18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 LLPHQ9BRT6 129 aaKnown RBP18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 DNAH12Q6ZR08 3092 aa18.43■□□□□ 0.54
SRGAP2C-201ENST00000304465 MYH6P13533 1939 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 TIMP1P01033 207 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 GH1P01241 217 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 RXRAP19793 462 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 GJB2P29033 226 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 CDC27P30260 824 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 PSMC6P62333 389 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 COPS5Q92905 334 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 CUL5Q93034 780 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 MTG1Q9BT17 334 aaPredicted RBP18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 TBX21Q9UL17 535 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 SMC3Q9UQE7 1217 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 MRVI1Q9Y6F6 885 aa18.42■□□□□ 0.54
SRGAP2C-201ENST00000304465 ZBTB43O43298 467 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 ITGB8P26012 769 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 RCAN1P53805 252 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 PURAQ00577 322 aaKnown RBP18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 SHHQ15465 462 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 NTRK3Q16288 839 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 LY6KQ17RY6 165 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 GPR153Q6NV75 609 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 MICU3Q86XE3 530 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 SLC43A3Q8NBI5 491 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 PDCD2LQ9BRP1 358 aa18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 NAP1L2Q9ULW6 460 aaPredicted RBP18.41■□□□□ 0.54
SRGAP2C-201ENST00000304465 A6NJR5 290 aa18.4■□□□□ 0.54
SRGAP2C-201ENST00000304465 ARIH2O95376 493 aa18.4■□□□□ 0.54
SRGAP2C-201ENST00000304465 PLEKHA8P1O95397 391 aa18.4■□□□□ 0.54
SRGAP2C-201ENST00000304465 CCND2P30279 289 aa18.4■□□□□ 0.54
SRGAP2C-201ENST00000304465 ADD1P35611 737 aaKnown RBP18.4■□□□□ 0.54
SRGAP2C-201ENST00000304465 CCDC62Q6P9F0 684 aa18.4■□□□□ 0.54
SRGAP2C-201ENST00000304465 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms