RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CCNA1P78396 465 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 MRPS9P82933 396 aaKnown RBP11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 ATP2C1P98194 919 aaPredicted RBP11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 KCTD2Q14681 263 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 PRR16Q569H4 304 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 SAMD3Q8N6K7 520 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 SHCBP1Q8NEM2 672 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 GPT2Q8TD30 523 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 KCNG4Q8TDN1 519 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 PDCD2LQ9BRP1 358 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 MAP3K20Q9NYL2 800 aaKnown RBP11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 PFASO15067 1338 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 ELP1O95163 1332 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 PLXNA1Q9UIW2 1896 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 IGLV3-22A0A075B6J6 115 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 CYP3A7-CYP3A51PA0A087WV96 503 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 VWA3AA6NCI4 1184 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 DDX11L8A8MPP1 907 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 COBLO75128 1261 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 PPP6R2O75170 966 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 TRPA1O75762 1119 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 NR3C2P08235 984 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 PTPREP23469 700 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 CYP3A7P24462 503 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 COPB2P35606 906 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 CSPP1Q1MSJ5 1256 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 PPP4R3AQ6IN85 833 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 GPR142Q7Z601 462 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 FAM133AQ8N9E0 248 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 HAS1Q92839 578 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 LENG9Q96B70 501 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 FGD4Q96M96 766 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 CSRNP2Q9H175 543 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 GOLPH3LQ9H4A5 285 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 CEP131Q9UPN4 1083 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 KIAA1217Q5T5P2 1943 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 FRMPD4Q14CM0 1322 aa11.04□□□□□ -0.64
SNRNP40-201ENST00000263694 DNAJC25-GNG10A0A024R161 153 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 GOLGA6L4A6NEF3 574 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 ARP10275 920 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 ITGB5P18084 799 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 LIG1P18858 919 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 ADORA2AP29274 412 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 CTGFP29279 349 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 CDC25AP30304 524 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 CIITAP33076 1130 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 TXKP42681 527 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 CALCRLQ16602 461 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 PCNX4Q63HM2 1172 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 SHC4Q6S5L8 630 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 USP49Q70CQ1 688 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 PLEKHH3Q7Z736 793 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 PLA2G4DQ86XP0 818 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 KRI1Q8N9T8 703 aaKnown RBP11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 NSUN6Q8TEA1 469 aaKnown RBP11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 MBOAT7Q96N66 472 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 MTMR9Q96QG7 549 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 WDR11Q9BZH6 1224 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 ARHGAP39Q9C0H5 1083 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 RNF186Q9NXI6 227 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 PKD2L1Q9P0L9 805 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 SRPRBQ9Y5M8 271 aaKnown RBP11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 MGAMO43451 1857 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 A0A1B0GVL5 298 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 PP2D1A8MPX8 630 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 MSH4O15457 936 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 CUTAO60888 179 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 OR52Z1P0C646 297 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 CCND2P30279 289 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 MAP2K2P36507 400 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 TECP42680 631 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 ALDH5A1P51649 535 aaPredicted RBP11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 UBE2HP62256 183 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 CAP1Q01518 475 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 Q4G0T1 1027 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 CEP55Q53EZ4 464 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 ADALQ6DHV7 355 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 VSIG10LQ86VR7 867 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 TEX2Q8IWB9 1127 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 JMYQ8N9B5 988 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 MXRA8Q9BRK3 442 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 IVNS1ABPQ9Y6Y0 642 aa11.03□□□□□ -0.64
SNRNP40-201ENST00000263694 PCNTO95613 3336 aa11.02□□□□□ -0.64
SNRNP40-201ENST00000263694 DOCK5Q9H7D0 1870 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 MEIS1O00470 390 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 TRAK2O60296 914 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 MARCH6O60337 910 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 BMP15O95972 392 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 ALDH1A1P00352 501 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 GCFC2P16383 781 aaKnown RBP11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 MAPK4P31152 587 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 C1QTNF8P60827 252 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 MOXD1Q6UVY6 613 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 DTHD1Q6ZMT9 781 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 EEPD1Q7L9B9 569 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 FSIP1Q8NA03 581 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 DNERQ8NFT8 737 aa11.02□□□□□ -0.65
SNRNP40-201ENST00000263694 ETNPPLQ8TBG4 499 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms