RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Nr1i2O54915 431 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cops6O88545 324 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Gap43P06837 227 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Fkbp1aP26883 108 aaKnown RBP13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Mum1l1Q4VA55 681 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Elf1Q60775 612 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Rhpn1Q61085 643 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ces1eQ64176 562 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Tarsl2Q8BLY2 790 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Wdr60Q8C761 999 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Matr3Q8K310 846 aaKnown RBP13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Vps37cQ8R105 352 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ifih1Q8R5F7 1025 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Vwa5aQ99KC8 793 aaKnown RBP13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Smtnl1Q99LM3 459 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ddx20Q9JJY4 825 aaKnown RBP13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cul1Q9WTX6 776 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Krt78E9Q0F0 1068 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Nol4P60954 483 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Atp11aP98197 1187 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Hdhd2Q3UGR5 259 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Mars2Q499X9 586 aaKnown RBP13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 LnpkQ7TQ95 425 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ube3cQ80U95 1083 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cep104Q80V31 926 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Q8C6G1 249 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Usp20Q8C6M1 916 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 GptQ8QZR5 496 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Atp1a1Q8VDN2 1023 aaKnown RBP13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ccdc65Q8VHI7 493 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Lrrc57Q9D1G5 239 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 NgdnQ9DB96 315 aaKnown RBP13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 AllcQ9JHX6 414 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 MefvQ9JJ26 767 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Pkd2l2Q9JLG4 621 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ercc4Q9QZD4 917 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Gucy1a2F8VQK3 730 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Sec24cG3X972 1096 aaKnown RBP13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Nr5a1P33242 462 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Sox13Q04891 613 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Hdgfl1Q2VPR5 283 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ifit1bl2Q3U687 466 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Arhgap44Q5SSM3 814 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Specc1Q5SXY1 1067 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Arid3aQ62431 601 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Fam170aQ66LM6 333 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Tlr13Q6R5N8 991 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 QarsQ8BML9 775 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Als2cr12Q8BVM7 383 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Rcor2Q8C796 523 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Tmem60Q8K174 133 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Luc7lQ9CYI4 371 aaKnown RBP13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Tjap1Q9DCD5 539 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 ErmapQ9JLN5 566 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Foxo4Q9WVH3 505 aa13.28□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Krt24A1L317 512 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Prr16A3KMN5 304 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Trim34bJ3QNR8 485 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 PpardP35396 440 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Senp1P59110 640 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Skap2Q3UND0 358 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ttf2Q5NC05 1138 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 HnrnpdQ60668 355 aaKnown RBP13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Secisbp2lQ6A098 1086 aaKnown RBP13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Xlr3bQ6P205 226 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Haus4Q8BFT2 363 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 E330017A01RikQ8BU47 192 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Trim9Q8C7M3 817 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Dhx58Q99J87 678 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Tmed5Q9CXE7 229 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Spata17Q9D552 379 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ndst4Q9EQW8 872 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Phf2Q9WTU0 1096 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Entpd5Q9WUZ9 427 aa13.27□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cep85lA0A1W2P884 806 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Krt18P05784 423 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Lmnb1P14733 588 aaKnown RBP13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Aco1P28271 889 aaKnown RBP13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Yy1Q00899 414 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Acot10Q32MW3 439 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Igflr1Q3U4N7 345 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Foxn3Q499D0 457 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Slc9a1Q61165 820 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pick1Q62083 416 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Nlrp4fQ66X05 959 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 WlsQ6DID7 541 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Acad11Q80XL6 779 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 SowahdQ8BY98 327 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Slc9b1Q8C0X2 565 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ccdc87Q8CDL9 855 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Dnm1lQ8K1M6 742 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 GlyctkQ8QZY2 523 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Grin3bQ91ZU9 1003 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Capn9Q9D805 690 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Efcc1Q9JJF6 558 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Tjp2Q9Z0U1 1167 aaKnown RBP13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Cog1Q9Z160 980 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 GsdmeQ9Z2D3 512 aa13.27□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Rbbp6P97868 1790 aaKnown RBP13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Proca1B0QZF7 307 aa13.26□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms