RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Ipo7Q9EPL8 1038 aaKnown RBP18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Arhgap4B1AUY3 965 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 AgtP11859 477 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Znf827Q505G8 1078 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Fam196bQ6GQV1 535 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Ccdc172Q810N9 267 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Trmt2aQ8BNV1 574 aaKnown RBP18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Ppp1r3gQ9CW07 347 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Ribc1Q9D0B8 379 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Sertad1Q9JL10 236 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Bpifb4A2BGH0 617 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Ano9P86044 747 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 F13a1Q8BH61 732 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 SltmQ8CH25 1031 aaKnown RBP18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 AvenQ9D9K3 342 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Vmn2r78K7N6U5 853 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Sco1Q5SUC9 284 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Foxd1Q61345 456 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Tm4sf1Q64302 202 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Mettl25Q6NXH8 597 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 NkrfQ8BY02 690 aaKnown RBP18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Dnajc19Q9CQV7 116 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Syce1Q9D495 329 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Nxnl2Q9D531 156 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Znf287Q9EQB9 759 aa18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Rpf2Q9JJ80 306 aaKnown RBP18.18■□□□□ 0.5
Shh-201ENSMUST00000002708 Dnai2A2AC93 623 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Odf2A3KGV1 830 aaKnown RBP18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Ppfia4B8QI36 1187 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Ces1aE9PYP1 563 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Fdx1P46656 188 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Acot10Q32MW3 439 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Lrrfip1Q3UZ39 729 aaKnown RBP18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Bbof1Q3V079 533 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Gpcpd1Q8C0L9 675 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Osbpl1aQ91XL9 950 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Xrcc4Q924T3 326 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Acot3Q9QYR7 432 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 GsdmeQ9Z2D3 512 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Gm1993A6X8I0 212 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 SlxD3Z347 212 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 UncxO08934 530 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Copb2O55029 905 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Ighmbp2P40694 993 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Wdhd1P59328 1117 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Tubb5P99024 444 aaKnown RBP18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Haus6Q6NV99 933 aaKnown RBP18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Ccdc148Q6P5U8 527 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Znf18Q810A1 556 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Prl7b1Q8CGZ9 251 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Nlrp5Q9R1M5 1163 aa18.17■□□□□ 0.5
Shh-201ENSMUST00000002708 Rsbn1lD3Z0K6 821 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 ChkbO55229 394 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Il27raO70394 623 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Sema3fO88632 785 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Chrna5Q2MKA5 467 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Zmym1Q3TJB1 983 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Klhdc9Q3USL1 350 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Eme2Q56A04 373 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Kctd1Q5M956 257 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Pcsk7Q61139 770 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Zfp446Q8C9M8 523 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Lmbrd1Q8K0B2 537 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Olfr805Q8VFI4 319 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Ndst4Q9EQW8 872 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Krt87Q6IMF0 495 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Trim6Q8BGE7 488 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Igdcc3Q8BQC3 813 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 HyiQ8R1F5 277 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Plagl2Q925T4 496 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Kremen1Q99N43 473 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Rhobtb3Q9CTN4 611 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Krt34Q9D646 392 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 2310002L09RikQ9D7L5 217 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Psma7Q9Z2U0 248 aa18.16■□□□□ 0.5
Shh-201ENSMUST00000002708 Sec14l1A8Y5H7 715 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Ppm1eQ80TL0 749 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Ccdc181Q80ZU5 509 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Ubxn6Q99PL6 442 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Tmem192Q9CXT7 266 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Saal1Q9D2C2 474 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Coro7Q9D2V7 922 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 E9QMW4 1145 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Gucy1b3O54865 620 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Cd44P15379 778 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Nap1l1P28656 391 aaKnown RBP18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Best3Q6H1V1 669 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Msl1Q6PDM1 616 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Nyap1Q6PFX7 833 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Hook2Q7TMK6 716 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Galnt17Q7TT15 598 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 WhrnQ80VW5 918 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Fam177a1Q8BR63 207 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Zbed3Q9D0L1 228 aa18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Ccnt1Q9QWV9 724 aaKnown RBP18.15■□□□□ 0.5
Shh-201ENSMUST00000002708 Nlrx1Q3TL44 975 aa18.14■□□□□ 0.5
Shh-201ENSMUST00000002708 Tmtc1Q3UV71 942 aa18.14■□□□□ 0.5
Shh-201ENSMUST00000002708 Ankrd24Q80VM7 985 aa18.14■□□□□ 0.5
Shh-201ENSMUST00000002708 Ttll1Q91V51 423 aa18.14■□□□□ 0.5
Shh-201ENSMUST00000002708 Inpp4aQ9EPW0 939 aa18.14■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 95.4 ms