RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 OM14P38325 134 aa-0.56□□□□□ -2.5
snR38snR38 PSD1P39006 500 aa-0.56□□□□□ -2.5
snR38snR38 PCF11P39081 626 aaPredicted RBP-0.56□□□□□ -2.5
snR38snR38 SCS2P40075 244 aaKnown RBP-0.56□□□□□ -2.5
snR38snR38 PFK26P40433 827 aaKnown RBP-0.56□□□□□ -2.5
snR38snR38 YIL059CP40520 121 aa-0.56□□□□□ -2.5
snR38snR38 SGM1P47166 707 aa-0.56□□□□□ -2.5
snR38snR38 ERG26P53199 349 aaKnown RBP-0.56□□□□□ -2.5
snR38snR38 SNU71P53207 620 aaKnown RBP-0.56□□□□□ -2.5
snR38snR38 ZRG17P53735 605 aa-0.56□□□□□ -2.5
snR38snR38 MRP51Q02950 344 aa-0.56□□□□□ -2.5
snR38snR38 FRE8Q12209 686 aa-0.56□□□□□ -2.5
snR38snR38 TPI1P00942 248 aaKnown RBP-0.57□□□□□ -2.5
snR38snR38 SAM1P10659 382 aaKnown RBP-0.57□□□□□ -2.5
snR38snR38 SAM2P19358 384 aaKnown RBP-0.57□□□□□ -2.5
snR38snR38 PHO3P24031 467 aa-0.57□□□□□ -2.5
snR38snR38 SNT1P25357 1226 aa-0.57□□□□□ -2.5
snR38snR38 CDC50P25656 391 aa-0.57□□□□□ -2.5
snR38snR38 ALK2P32789 676 aaPredicted RBP-0.57□□□□□ -2.5
snR38snR38 MRPL27P36526 146 aaPredicted RBP-0.57□□□□□ -2.5
snR38snR38 TSC10P38342 320 aa-0.57□□□□□ -2.5
snR38snR38 CHL4P38907 458 aa-0.57□□□□□ -2.5
snR38snR38 SAW1P39735 261 aa-0.57□□□□□ -2.5
snR38snR38 OXA1P39952 402 aa-0.57□□□□□ -2.5
snR38snR38 ALD5P40047 520 aaKnown RBP-0.57□□□□□ -2.5
snR38snR38 YNL208WP40159 199 aaKnown RBP-0.57□□□□□ -2.5
snR38snR38 SSU1P41930 458 aa-0.57□□□□□ -2.5
snR38snR38 UPF3P48412 387 aaKnown RBP-0.57□□□□□ -2.5
snR38snR38 COQ5P49017 307 aa-0.57□□□□□ -2.5
snR38snR38 ZDS2P54786 942 aa-0.57□□□□□ -2.5
snR38snR38 RSM23Q01163 450 aa-0.57□□□□□ -2.5
snR38snR38 PNG1Q02890 363 aa-0.57□□□□□ -2.5
snR38snR38 ODC1Q03028 310 aa-0.57□□□□□ -2.5
snR38snR38 HOT1Q03213 719 aa-0.57□□□□□ -2.5
snR38snR38 PHO92Q06390 306 aa-0.57□□□□□ -2.5
snR38snR38 THI73Q07904 523 aa-0.57□□□□□ -2.5
snR38snR38 ETT1Q08421 412 aaKnown RBP-0.57□□□□□ -2.5
snR38snR38 PRP8P33334 2413 aaKnown RBP-0.57□□□□□ -2.5
snR38snR38 YER188C-AP0C0V2 99 aa-0.58□□□□□ -2.5
snR38snR38 NCP1P16603 691 aaKnown RBP-0.58□□□□□ -2.5
snR38snR38 COX11P19516 300 aaKnown RBP-0.58□□□□□ -2.5
snR38snR38 KAR9P32526 644 aa-0.58□□□□□ -2.5
snR38snR38 ECT1P33412 323 aa-0.58□□□□□ -2.5
snR38snR38 SNU114P36048 1008 aaKnown RBP-0.58□□□□□ -2.5
snR38snR38 YFR057WP43625 151 aa-0.58□□□□□ -2.5
snR38snR38 RPS10BP46784 105 aaKnown RBP-0.58□□□□□ -2.5
snR38snR38 MTQ1P53944 314 aa-0.58□□□□□ -2.5
snR38snR38 NUP116Q02630 1113 aa-0.58□□□□□ -2.5
snR38snR38 PPM1Q04081 328 aa-0.58□□□□□ -2.5
snR38snR38 YOR283WQ12040 230 aaKnown RBP-0.58□□□□□ -2.5
snR38snR38 ATG9Q12142 997 aa-0.58□□□□□ -2.5
snR38snR38 RAD61Q99359 647 aa-0.58□□□□□ -2.5
snR38snR38 YAR066WP0CX18 203 aa-0.59□□□□□ -2.5
snR38snR38 YHR214WP0CX19 203 aa-0.59□□□□□ -2.5
snR38snR38 SRB5P32585 307 aa-0.59□□□□□ -2.5
snR38snR38 MUD1P32605 298 aaKnown RBP-0.59□□□□□ -2.5
snR38snR38 TKL2P33315 681 aa-0.59□□□□□ -2.5
snR38snR38 YKL100CP34248 587 aa-0.59□□□□□ -2.5
snR38snR38 YKR032WP36127 104 aa-0.59□□□□□ -2.5
snR38snR38 SWD1P39706 426 aa-0.59□□□□□ -2.5
snR38snR38 DUG1P43616 481 aaKnown RBP-0.59□□□□□ -2.5
snR38snR38 MDE1P47095 244 aa-0.59□□□□□ -2.5
snR38snR38 BIR1P47134 954 aa-0.59□□□□□ -2.5
snR38snR38 PGU1P47180 361 aa-0.59□□□□□ -2.5
snR38snR38 TRS130Q03660 1102 aa-0.59□□□□□ -2.5
snR38snR38 YMR155WQ03795 547 aa-0.59□□□□□ -2.5
snR38snR38 YET2Q04210 160 aa-0.59□□□□□ -2.5
snR38snR38 CDC24P11433 854 aaPredicted RBP-0.6□□□□□ -2.51
snR38snR38 MFT1P33441 392 aaKnown RBP-0.6□□□□□ -2.51
snR38snR38 SKT5P34226 696 aa-0.6□□□□□ -2.51
snR38snR38 TRR2P38816 342 aa-0.6□□□□□ -2.51
snR38snR38 GPP2P40106 250 aaKnown RBP-0.6□□□□□ -2.51
snR38snR38 COS4P43542 379 aa-0.6□□□□□ -2.51
snR38snR38 LAM5P43560 674 aa-0.6□□□□□ -2.51
snR38snR38 PUS4P48567 403 aaKnown RBP-0.6□□□□□ -2.51
snR38snR38 ASE1P50275 885 aa-0.6□□□□□ -2.51
snR38snR38 MIG2P53035 382 aa-0.6□□□□□ -2.51
snR38snR38 YGL088WP53151 121 aa-0.6□□□□□ -2.51
snR38snR38 BUD32P53323 261 aa-0.6□□□□□ -2.51
snR38snR38 RPT6Q01939 405 aaKnown RBP-0.6□□□□□ -2.51
snR38snR38 UME1Q03010 460 aa-0.6□□□□□ -2.51
snR38snR38 YMR181CQ03231 154 aa-0.6□□□□□ -2.51
snR38snR38 MRD1Q06106 887 aaKnown RBP-0.6□□□□□ -2.51
snR38snR38 RIX7Q07844 837 aaKnown RBP-0.6□□□□□ -2.51
snR38snR38 CMS1Q07897 291 aaKnown RBP-0.6□□□□□ -2.51
snR38snR38 RPS10AQ08745 105 aaPredicted RBP-0.6□□□□□ -2.51
snR38snR38 RLM1Q12224 676 aa-0.6□□□□□ -2.51
snR38snR38 YOR019WQ99248 730 aa-0.6□□□□□ -2.51
snR38snR38 ATP2P00830 511 aaKnown RBP-0.61□□□□□ -2.51
snR38snR38 RPB2P08518 1224 aaKnown RBP-0.61□□□□□ -2.51
snR38snR38 ADH4P10127 382 aa-0.61□□□□□ -2.51
snR38snR38 YAK1P14680 807 aa-0.61□□□□□ -2.51
snR38snR38 RPL8AP17076 256 aaKnown RBP-0.61□□□□□ -2.51
snR38snR38 RPB5P20434 215 aa-0.61□□□□□ -2.51
snR38snR38 BUD5P25300 642 aaPredicted RBP-0.61□□□□□ -2.51
snR38snR38 YCR100CP25606 316 aa-0.61□□□□□ -2.51
snR38snR38 DAL3P32459 195 aa-0.61□□□□□ -2.51
snR38snR38 PAM1P37304 830 aaKnown RBP-0.61□□□□□ -2.51
snR38snR38 DIA4P38705 446 aaPredicted RBP-0.61□□□□□ -2.51
snR38snR38 MST28P39552 234 aa-0.61□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms