RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W TY2A-LR1P0C2J4 438 aa1.67□□□□□ -2.14
CTF4YPR135W TY2A-FP0CX61 438 aa1.67□□□□□ -2.14
CTF4YPR135W TY2A-GR2P0CX62 438 aa1.67□□□□□ -2.14
CTF4YPR135W TCP1P12612 559 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W PRP28P23394 588 aa1.67□□□□□ -2.14
CTF4YPR135W VPS3P23643 1011 aa1.67□□□□□ -2.14
CTF4YPR135W SAT4P25333 603 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W TY2A-CP25383 438 aa1.67□□□□□ -2.14
CTF4YPR135W CWH43P25618 953 aa1.67□□□□□ -2.14
CTF4YPR135W YBR056WP38081 501 aa1.67□□□□□ -2.14
CTF4YPR135W YHR054CP38780 354 aa1.67□□□□□ -2.14
CTF4YPR135W LNP1P38878 278 aa1.67□□□□□ -2.14
CTF4YPR135W GAA1P39012 614 aa1.67□□□□□ -2.14
CTF4YPR135W SGN1P40561 250 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
CTF4YPR135W DSN1P40568 576 aa1.67□□□□□ -2.14
CTF4YPR135W THI6P41835 540 aa1.67□□□□□ -2.14
CTF4YPR135W TCB2P48231 1178 aa1.67□□□□□ -2.14
CTF4YPR135W YNR068CP53754 272 aa1.67□□□□□ -2.14
CTF4YPR135W JJJ1P53863 590 aa1.67□□□□□ -2.14
CTF4YPR135W INN1P53901 409 aa1.67□□□□□ -2.14
CTF4YPR135W ALF1P53904 254 aa1.67□□□□□ -2.14
CTF4YPR135W PRO2P54885 456 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W PEX25Q02969 394 aa1.67□□□□□ -2.14
CTF4YPR135W TY2A-DR2Q03483 438 aa1.67□□□□□ -2.14
CTF4YPR135W SNU56Q03782 492 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W TRI1Q05024 226 aa1.67□□□□□ -2.14
CTF4YPR135W ARP9Q05123 467 aa1.67□□□□□ -2.14
CTF4YPR135W VAM6Q07468 1049 aa1.67□□□□□ -2.14
CTF4YPR135W SRO7Q12038 1033 aa1.67□□□□□ -2.14
CTF4YPR135W TY2A-BQ12260 438 aa1.67□□□□□ -2.14
CTF4YPR135W TY2A-OR2Q12293 438 aa1.67□□□□□ -2.14
CTF4YPR135W TY2A-DR1Q12392 438 aa1.67□□□□□ -2.14
CTF4YPR135W ZRT2Q12436 422 aa1.67□□□□□ -2.14
CTF4YPR135W TY2A-OR1Q12439 438 aa1.67□□□□□ -2.14
CTF4YPR135W POM34Q12445 299 aa1.67□□□□□ -2.14
CTF4YPR135W SEC39Q12745 709 aa1.67□□□□□ -2.14
CTF4YPR135W CTF3Q12748 733 aa1.67□□□□□ -2.14
CTF4YPR135W NAG1Q8TGN9 163 aa1.67□□□□□ -2.14
CTF4YPR135W TY2A-DR3Q99303 438 aa1.67□□□□□ -2.14
CTF4YPR135W PDR18P53756 1333 aa1.67□□□□□ -2.14
CTF4YPR135W TRX1P22217 103 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W CLB1P24868 471 aa1.67□□□□□ -2.14
CTF4YPR135W SNT1P25357 1226 aa1.67□□□□□ -2.14
CTF4YPR135W URA7P28274 579 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W PUP2P32379 260 aa1.67□□□□□ -2.14
CTF4YPR135W COT1P32798 439 aa1.67□□□□□ -2.14
CTF4YPR135W PPQ1P32945 549 aa1.67□□□□□ -2.14
CTF4YPR135W CNS1P33313 385 aa1.67□□□□□ -2.14
CTF4YPR135W ADH5P38113 351 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W EHT1P38295 451 aa1.67□□□□□ -2.14
CTF4YPR135W CRG1P38892 291 aaRIP-Chip data1.67□□□□□ -2.14not detected
CTF4YPR135W SMF1P38925 575 aa1.67□□□□□ -2.14
CTF4YPR135W MIT1P40002 666 aa1.67□□□□□ -2.14
CTF4YPR135W MET18P40469 1032 aa1.67□□□□□ -2.14
CTF4YPR135W ARC1P46672 376 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W PYK2P52489 506 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W CAF130P53280 1122 aaPredicted RBP1.67□□□□□ -2.14
CTF4YPR135W DIP5P53388 608 aa1.67□□□□□ -2.14
CTF4YPR135W GIS2P53849 153 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
CTF4YPR135W REG1Q00816 1014 aa1.67□□□□□ -2.14
CTF4YPR135W YPL113CQ02961 396 aa1.67□□□□□ -2.14
CTF4YPR135W NGL2Q03264 515 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W HMO1Q03973 246 aaKnown RBP1.67□□□□□ -2.14
CTF4YPR135W GTB1Q04924 702 aa1.67□□□□□ -2.14
CTF4YPR135W RSF1Q05043 376 aa1.67□□□□□ -2.14
CTF4YPR135W ISA2Q12425 185 aa1.67□□□□□ -2.14
CTF4YPR135W VCX1Q99385 411 aa1.67□□□□□ -2.14
CTF4YPR135W CBS1P14066 229 aa1.66□□□□□ -2.14
CTF4YPR135W ERG8P24521 451 aa1.66□□□□□ -2.14
CTF4YPR135W LAS1P36146 502 aaPredicted RBP1.66□□□□□ -2.14
CTF4YPR135W THI2P38141 450 aa1.66□□□□□ -2.14
CTF4YPR135W FSH1P38777 243 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W CCT6P39079 546 aa1.66□□□□□ -2.14
CTF4YPR135W FLC2P39719 783 aa1.66□□□□□ -2.14
CTF4YPR135W ARF3P40994 183 aaRIP-Chip data1.66□□□□□ -2.14not detected
CTF4YPR135W GCD10P41814 478 aa1.66□□□□□ -2.14
CTF4YPR135W ASG7P46993 209 aa1.66□□□□□ -2.14
CTF4YPR135W IKS1P47042 667 aa1.66□□□□□ -2.14
CTF4YPR135W NPA3P47122 385 aa1.66□□□□□ -2.14
CTF4YPR135W LCL3P53153 274 aa1.66□□□□□ -2.14
CTF4YPR135W TOF1P53840 1238 aa1.66□□□□□ -2.14
CTF4YPR135W YPL068CQ02749 293 aa1.66□□□□□ -2.14
CTF4YPR135W TRS31Q03337 283 aa1.66□□□□□ -2.14
CTF4YPR135W CWC21Q03375 135 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W WAR1Q03631 944 aa1.66□□□□□ -2.14
CTF4YPR135W PRM6Q04705 352 aa1.66□□□□□ -2.14
CTF4YPR135W YDL144CQ07589 356 aa1.66□□□□□ -2.14
CTF4YPR135W AIM6Q07716 390 aa1.66□□□□□ -2.14
CTF4YPR135W PML1Q07930 204 aaPredicted RBP1.66□□□□□ -2.14
CTF4YPR135W RPN8Q08723 338 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W TAF10Q12030 206 aa1.66□□□□□ -2.14
CTF4YPR135W SGT2Q12118 346 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W GLE1Q12315 538 aa1.66□□□□□ -2.14
CTF4YPR135W PSY3Q12318 242 aa1.66□□□□□ -2.14
CTF4YPR135W CEX1Q12453 761 aa1.66□□□□□ -2.14
CTF4YPR135W YBR126W-AQ8TGU7 68 aa1.66□□□□□ -2.14
CTF4YPR135W YOR111WQ99210 232 aa1.66□□□□□ -2.14
CTF4YPR135W SEC53P07283 254 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W SSA3P09435 649 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W CDC24P11433 854 aaPredicted RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms