RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W DBP8P38719 431 aa2.31□□□□□ -2.04
VPS16YPL045W MBB1P39534 108 aa2.31□□□□□ -2.04
VPS16YPL045W YIL089WP40500 205 aa2.31□□□□□ -2.04
VPS16YPL045W CDC1P40986 491 aa2.31□□□□□ -2.04
VPS16YPL045W ATG27P46989 271 aa2.31□□□□□ -2.04
VPS16YPL045W AIM22P47051 409 aa2.31□□□□□ -2.04
VPS16YPL045W CUE3P53137 624 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W YGL108CP53139 140 aa2.31□□□□□ -2.04
VPS16YPL045W ERV25P54837 211 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W YMR178WQ03219 274 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W YMR130WQ04223 302 aa2.31□□□□□ -2.04
VPS16YPL045W EMI2Q04409 500 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W MGR3Q04472 501 aa2.31□□□□□ -2.04
VPS16YPL045W CYK3Q07533 885 aa2.31□□□□□ -2.04
VPS16YPL045W NOP6Q07623 225 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W MLH2Q07980 695 aa2.31□□□□□ -2.04
VPS16YPL045W CDC45Q08032 650 aa2.31□□□□□ -2.04
VPS16YPL045W SLK19Q08581 821 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W NCE102Q12207 173 aaRIP-Chip data2.31□□□□□ -2.04not detected
VPS16YPL045W HER1Q12276 1246 aa2.31□□□□□ -2.04
VPS16YPL045W MDY2Q12285 212 aa2.31□□□□□ -2.04
VPS16YPL045W TFB5Q3E7C1 72 aaPredicted RBP2.31□□□□□ -2.04
VPS16YPL045W YOR093CQ12275 1648 aa2.3□□□□□ -2.04
VPS16YPL045W SEC3P33332 1336 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W RPL7AP05737 244 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W ADE5,7P07244 802 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W CBP1P07252 654 aa2.3□□□□□ -2.04
VPS16YPL045W ARO3P14843 370 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W PRP2P20095 876 aaPredicted RBP2.3□□□□□ -2.04
VPS16YPL045W GEX1P25596 615 aa2.3□□□□□ -2.04
VPS16YPL045W RAD14P28519 371 aa2.3□□□□□ -2.04
VPS16YPL045W PPQ1P32945 549 aa2.3□□□□□ -2.04
VPS16YPL045W ASC1P38011 319 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W ZTA1P38230 334 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W ARP1P38696 384 aa2.3□□□□□ -2.04
VPS16YPL045W RIX1P38883 763 aaPredicted RBP2.3□□□□□ -2.04
VPS16YPL045W FAD1P38913 306 aa2.3□□□□□ -2.04
VPS16YPL045W ASN1P49089 572 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W TOM22P49334 152 aa2.3□□□□□ -2.04
VPS16YPL045W SLG1P54867 378 aa2.3□□□□□ -2.04
VPS16YPL045W RSM23Q01163 450 aa2.3□□□□□ -2.04
VPS16YPL045W MUK1Q02866 612 aa2.3□□□□□ -2.04
VPS16YPL045W YLR455WQ06188 304 aa2.3□□□□□ -2.04
VPS16YPL045W ECM30Q06673 1274 aa2.3□□□□□ -2.04
VPS16YPL045W RPL7BQ12213 244 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W VAM3Q12241 283 aa2.3□□□□□ -2.04
VPS16YPL045W YDR061WQ12298 539 aa2.3□□□□□ -2.04
VPS16YPL045W COR1P07256 457 aa2.3□□□□□ -2.04
VPS16YPL045W SPS4P09937 338 aa2.3□□□□□ -2.04
VPS16YPL045W MRP2P10663 115 aaPredicted RBP2.3□□□□□ -2.04
VPS16YPL045W FAA1P30624 700 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W SAC1P32368 623 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W HIR2P32480 875 aa2.3□□□□□ -2.04
VPS16YPL045W MTR2P34232 184 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W MRPL4P36517 319 aa2.3□□□□□ -2.04
VPS16YPL045W ARA1P38115 344 aa2.3□□□□□ -2.04
VPS16YPL045W GDT1P38301 280 aaPredicted RBP2.3□□□□□ -2.04
VPS16YPL045W YHR218WP38899 603 aa2.3□□□□□ -2.04
VPS16YPL045W YTA12P40341 825 aa2.3□□□□□ -2.04
VPS16YPL045W VHS2P40463 436 aa2.3□□□□□ -2.04
VPS16YPL045W EFM3P47163 339 aa2.3□□□□□ -2.04
VPS16YPL045W YTP1P53584 459 aa2.3□□□□□ -2.04
VPS16YPL045W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
VPS16YPL045W KIN4Q01919 800 aa2.3□□□□□ -2.04
VPS16YPL045W PFA5Q03289 374 aa2.3□□□□□ -2.04
VPS16YPL045W RPN9Q04062 393 aaKnown RBP2.3□□□□□ -2.04
VPS16YPL045W YDL057WQ07379 328 aa2.3□□□□□ -2.04
VPS16YPL045W MED2Q12124 431 aa2.3□□□□□ -2.04
VPS16YPL045W DNF3Q12674 1656 aa2.29□□□□□ -2.04
VPS16YPL045W YER145C-AA0A023PYF4 145 aa2.29□□□□□ -2.04
VPS16YPL045W PUT2P07275 575 aa2.29□□□□□ -2.04
VPS16YPL045W TAL1P15019 335 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W DBP3P20447 523 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W MAK32P23060 363 aa2.29□□□□□ -2.04
VPS16YPL045W RNQ1P25367 405 aa2.29□□□□□ -2.04
VPS16YPL045W NIP1P32497 812 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W RIB7P33312 244 aa2.29□□□□□ -2.04
VPS16YPL045W KEL1P38853 1164 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W YDR089WP38966 869 aa2.29□□□□□ -2.04
VPS16YPL045W YMR147WP40218 223 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W ULP2P40537 1034 aaPredicted RBP2.29□□□□□ -2.04
VPS16YPL045W EPL1P43572 832 aa2.29□□□□□ -2.04
VPS16YPL045W AQR1P53943 586 aa2.29□□□□□ -2.04
VPS16YPL045W KTR5P53966 522 aaPredicted RBP2.29□□□□□ -2.04
VPS16YPL045W GRX3Q03835 250 aa2.29□□□□□ -2.04
VPS16YPL045W ADE13Q05911 482 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W THI3Q07471 609 aa2.29□□□□□ -2.04
VPS16YPL045W APL5Q08951 932 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W MTR10Q99189 972 aa2.29□□□□□ -2.04
VPS16YPL045W YMR084WA2P2R3 262 aa2.29□□□□□ -2.04
VPS16YPL045W PEP4P07267 405 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W GPA1P08539 472 aa2.29□□□□□ -2.04
VPS16YPL045W SRV2P17555 526 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W UBA1P22515 1024 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W CLB2P24869 491 aa2.29□□□□□ -2.04
VPS16YPL045W YCR006CP25350 157 aa2.29□□□□□ -2.04
VPS16YPL045W PHO91P27514 894 aa2.29□□□□□ -2.04
VPS16YPL045W CTS1P29029 562 aa2.29□□□□□ -2.04
VPS16YPL045W PMI40P29952 429 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W SRB2P34162 210 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms