RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeastyeast

Gene TPM1, Length 600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM1YNL079C MED1Q12321 566 aa3.64□□□□□ -1.83
TPM1YNL079C TY1B-AO13527 1196 aaKnown RBP3.63□□□□□ -1.83
TPM1YNL079C CLN3P13365 580 aa3.63□□□□□ -1.83
TPM1YNL079C KAR3P17119 729 aa3.63□□□□□ -1.83
TPM1YNL079C AAC3P18238 307 aa3.63□□□□□ -1.83
TPM1YNL079C YCK1P23291 538 aa3.63□□□□□ -1.83
TPM1YNL079C RAD57P25301 460 aa3.63□□□□□ -1.83
TPM1YNL079C SRB4P32569 687 aa3.63□□□□□ -1.83
TPM1YNL079C YEL043WP32618 956 aa3.63□□□□□ -1.83
TPM1YNL079C UBP11P36026 717 aa3.63□□□□□ -1.83
TPM1YNL079C AUR1P36107 401 aaPredicted RBP3.63□□□□□ -1.83
TPM1YNL079C GAT1P43574 510 aa3.63□□□□□ -1.83
TPM1YNL079C MDV1P47025 714 aa3.63□□□□□ -1.83
TPM1YNL079C RPS7BP48164 190 aaKnown RBP3.63□□□□□ -1.83
TPM1YNL079C DUO1P53168 247 aaKnown RBP3.63□□□□□ -1.83
TPM1YNL079C MAL13P53338 473 aa3.63□□□□□ -1.83
TPM1YNL079C YMR178WQ03219 274 aaKnown RBP3.63□□□□□ -1.83
TPM1YNL079C ARP10Q04549 284 aa3.63□□□□□ -1.83
TPM1YNL079C CUR1Q06469 252 aa3.63□□□□□ -1.83
TPM1YNL079C VAC14Q06708 880 aa3.63□□□□□ -1.83
TPM1YNL079C YPR078CQ06813 372 aa3.63□□□□□ -1.83
TPM1YNL079C GSH2Q08220 491 aa3.63□□□□□ -1.83
TPM1YNL079C ICT1Q12385 394 aa3.63□□□□□ -1.83
TPM1YNL079C YBR126W-AQ8TGU7 68 aa3.63□□□□□ -1.83
TPM1YNL079C SAM1P10659 382 aaKnown RBP3.62□□□□□ -1.83
TPM1YNL079C TCP1P12612 559 aaKnown RBP3.62□□□□□ -1.83
TPM1YNL079C CKI1P20485 582 aa3.62□□□□□ -1.83
TPM1YNL079C VMA16P23968 213 aa3.62□□□□□ -1.83
TPM1YNL079C HXT1P32465 570 aa3.62□□□□□ -1.83
TPM1YNL079C TMT1P32643 299 aa3.62□□□□□ -1.83
TPM1YNL079C RRP1P35178 278 aaPredicted RBP3.62□□□□□ -1.83
TPM1YNL079C YKL050CP35736 922 aa3.62□□□□□ -1.83
TPM1YNL079C MCR1P36060 302 aaKnown RBP3.62□□□□□ -1.83
TPM1YNL079C MNN2P38069 597 aa3.62□□□□□ -1.83
TPM1YNL079C AGP2P38090 596 aa3.62□□□□□ -1.83
TPM1YNL079C YBL029WP38201 376 aa3.62□□□□□ -1.83
TPM1YNL079C VAB2P40003 282 aa3.62□□□□□ -1.83
TPM1YNL079C FIS1P40515 155 aa3.62□□□□□ -1.83
TPM1YNL079C HXT9P40885 567 aa3.62□□□□□ -1.83
TPM1YNL079C LYS20P48570 428 aaKnown RBP3.62□□□□□ -1.83
TPM1YNL079C TOF1P53840 1238 aa3.62□□□□□ -1.83
TPM1YNL079C NCS2P53923 493 aaPredicted RBP3.62□□□□□ -1.83
TPM1YNL079C ARK1P53974 638 aa3.62□□□□□ -1.83
TPM1YNL079C NGL3Q03210 505 aa3.62□□□□□ -1.83
TPM1YNL079C GIR2Q03768 265 aaPredicted RBP3.62□□□□□ -1.83
TPM1YNL079C RRB1Q04225 511 aaKnown RBP3.62□□□□□ -1.83
TPM1YNL079C RBA50Q04418 439 aa3.62□□□□□ -1.83
TPM1YNL079C YPL272CQ08984 517 aa3.62□□□□□ -1.83
TPM1YNL079C DAS2Q12084 232 aa3.62□□□□□ -1.83
TPM1YNL079C HUA2Q12134 243 aa3.62□□□□□ -1.83
TPM1YNL079C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
TPM1YNL079C UBX3Q12229 455 aa3.62□□□□□ -1.83
TPM1YNL079C RPL42AP0CX27 106 aaKnown RBP3.61□□□□□ -1.83
TPM1YNL079C RPL42BP0CX28 106 aaKnown RBP3.61□□□□□ -1.83
TPM1YNL079C ADH7P25377 361 aa3.61□□□□□ -1.83
TPM1YNL079C UTR4P32626 227 aa3.61□□□□□ -1.83
TPM1YNL079C YSC83P32792 385 aa3.61□□□□□ -1.83
TPM1YNL079C NIP100P33420 868 aa3.61□□□□□ -1.83
TPM1YNL079C SHP1P34223 423 aa3.61□□□□□ -1.83
TPM1YNL079C MIA40P36046 403 aa3.61□□□□□ -1.83
TPM1YNL079C BYE1P36106 594 aa3.61□□□□□ -1.83
TPM1YNL079C JNM1P36224 373 aa3.61□□□□□ -1.83
TPM1YNL079C ARP1P38696 384 aa3.61□□□□□ -1.83
TPM1YNL079C SMF1P38925 575 aa3.61□□□□□ -1.83
TPM1YNL079C ELO1P39540 310 aa3.61□□□□□ -1.83
TPM1YNL079C YIR016WP40572 265 aa3.61□□□□□ -1.83
TPM1YNL079C COS5P47187 383 aa3.61□□□□□ -1.83
TPM1YNL079C DIA3P52290 468 aa3.61□□□□□ -1.83
TPM1YNL079C STR3P53101 465 aaKnown RBP3.61□□□□□ -1.83
TPM1YNL079C SGF73P53165 657 aa3.61□□□□□ -1.83
TPM1YNL079C YGL039WP53183 348 aaKnown RBP3.61□□□□□ -1.83
TPM1YNL079C ZPR1P53303 486 aaKnown RBP3.61□□□□□ -1.83
TPM1YNL079C IZH1Q03419 316 aa3.61□□□□□ -1.83
TPM1YNL079C SOV1Q04748 898 aa3.61□□□□□ -1.83
TPM1YNL079C YLR297WQ05899 129 aa3.61□□□□□ -1.83
TPM1YNL079C UTP21Q06078 939 aaPredicted RBP3.61□□□□□ -1.83
TPM1YNL079C MCP2Q06567 569 aa3.61□□□□□ -1.83
TPM1YNL079C RLP24Q07915 199 aaKnown RBP3.61□□□□□ -1.83
TPM1YNL079C NMD4Q12129 218 aa3.61□□□□□ -1.83
TPM1YNL079C SPE4Q12455 300 aa3.61□□□□□ -1.83
TPM1YNL079C FKS1P38631 1876 aaKnown RBP3.6□□□□□ -1.83
TPM1YNL079C VMA2P16140 517 aaKnown RBP3.6□□□□□ -1.83
TPM1YNL079C RPO26P20435 155 aa3.6□□□□□ -1.83
TPM1YNL079C PGS1P25578 521 aa3.6□□□□□ -1.83
TPM1YNL079C POL4P25615 582 aa3.6□□□□□ -1.83
TPM1YNL079C GAC1P28006 793 aa3.6□□□□□ -1.83
TPM1YNL079C YKL023WP36103 277 aaKnown RBP3.6□□□□□ -1.83
TPM1YNL079C TSC10P38342 320 aa3.6□□□□□ -1.83
TPM1YNL079C ANS1P38832 159 aa3.6□□□□□ -1.83
TPM1YNL079C NAB3P38996 802 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
TPM1YNL079C CCT4P39078 528 aaKnown RBP3.6□□□□□ -1.83
TPM1YNL079C CIN4P39110 191 aa3.6□□□□□ -1.83
TPM1YNL079C PCL6P40038 420 aa3.6□□□□□ -1.83
TPM1YNL079C YIL060WP40519 144 aa3.6□□□□□ -1.83
TPM1YNL079C LCB2P40970 561 aa3.6□□□□□ -1.83
TPM1YNL079C SGM1P47166 707 aa3.6□□□□□ -1.83
TPM1YNL079C BTN2P53286 410 aa3.6□□□□□ -1.83
TPM1YNL079C ESBP6P53918 673 aa3.6□□□□□ -1.83
TPM1YNL079C TIM8P57744 87 aa3.6□□□□□ -1.83
TPM1YNL079C YPL068CQ02749 293 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms