RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C CLB3P24870 427 aa8.9□□□□□ -0.98
SEC61YLR378C CLB4P24871 460 aa8.9□□□□□ -0.98
SEC61YLR378C PEX6P33760 1030 aa8.9□□□□□ -0.98
SEC61YLR378C SPT23P35210 1082 aa8.9□□□□□ -0.98
SEC61YLR378C DEF1P35732 738 aaKnown RBP8.9□□□□□ -0.98
SEC61YLR378C SOL2P37262 315 aa8.9□□□□□ -0.98
SEC61YLR378C DSS1P39112 969 aa8.9□□□□□ -0.98
SEC61YLR378C RGI1P40043 161 aaPredicted RBP8.9□□□□□ -0.98
SEC61YLR378C NDE1P40215 560 aa8.9□□□□□ -0.98
SEC61YLR378C NUP85P46673 744 aa8.9□□□□□ -0.98
SEC61YLR378C DSL1P53847 754 aa8.9□□□□□ -0.98
SEC61YLR378C MPS1P54199 764 aa8.9□□□□□ -0.98
SEC61YLR378C SMA1Q02651 245 aa8.9□□□□□ -0.98
SEC61YLR378C YLL007CQ07799 665 aa8.9□□□□□ -0.98
SEC61YLR378C MEU1Q07938 337 aaKnown RBP RIP-Chip data8.9□□□□□ -0.98not detected
SEC61YLR378C TUB1P09733 447 aaKnown RBP8.89□□□□□ -0.99
SEC61YLR378C HXT4P32467 576 aa8.89□□□□□ -0.99
SEC61YLR378C YBR071WP38243 211 aa8.89□□□□□ -0.99
SEC61YLR378C YPT35P38815 214 aaKnown RBP8.89□□□□□ -0.99
SEC61YLR378C FAD1P38913 306 aa8.89□□□□□ -0.99
SEC61YLR378C HXT6P39003 570 aaKnown RBP8.89□□□□□ -0.99
SEC61YLR378C HXT7P39004 570 aa8.89□□□□□ -0.99
SEC61YLR378C CAB2P40506 365 aa8.89□□□□□ -0.99
SEC61YLR378C FMP32P43557 207 aa8.89□□□□□ -0.99
SEC61YLR378C LSB3P43603 459 aaKnown RBP8.89□□□□□ -0.99
SEC61YLR378C GOR1P53839 350 aa8.89□□□□□ -0.99
SEC61YLR378C SDH1Q00711 640 aa8.89□□□□□ -0.99
SEC61YLR378C SSQ1Q05931 657 aaPredicted RBP8.89□□□□□ -0.99
SEC61YLR378C YLL054CQ12244 843 aa8.89□□□□□ -0.99
SEC61YLR378C RPN6Q12377 434 aa8.89□□□□□ -0.99
SEC61YLR378C CBP2P03874 630 aaPredicted RBP8.88□□□□□ -0.99
SEC61YLR378C UGA1P17649 471 aa8.88□□□□□ -0.99
SEC61YLR378C RDS2P19541 446 aaKnown RBP8.88□□□□□ -0.99
SEC61YLR378C GLG1P36143 616 aa8.88□□□□□ -0.99
SEC61YLR378C RRP3P38712 501 aaKnown RBP8.88□□□□□ -0.99
SEC61YLR378C FAA2P39518 744 aa8.88□□□□□ -0.99
SEC61YLR378C ECM10P39987 644 aa8.88□□□□□ -0.99
SEC61YLR378C GVP36P40531 326 aaKnown RBP8.88□□□□□ -0.99
SEC61YLR378C GAB1P41733 394 aa8.88□□□□□ -0.99
SEC61YLR378C GCV1P48015 400 aa8.88□□□□□ -0.99
SEC61YLR378C MAP1Q01662 387 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
SEC61YLR378C UGO1Q03327 502 aa8.88□□□□□ -0.99
SEC61YLR378C COS7Q07788 383 aa8.88□□□□□ -0.99
SEC61YLR378C YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
SEC61YLR378C PLB3Q08108 686 aa8.88□□□□□ -0.99
SEC61YLR378C SAM4Q08985 325 aaKnown RBP8.88□□□□□ -0.99
SEC61YLR378C NTO1Q12311 748 aa8.88□□□□□ -0.99
SEC61YLR378C ARG81P05085 880 aa8.88□□□□□ -0.99
SEC61YLR378C KAR1P11927 433 aa8.88□□□□□ -0.99
SEC61YLR378C PRI2P20457 528 aa8.88□□□□□ -0.99
SEC61YLR378C COS111P38308 924 aa8.88□□□□□ -0.99
SEC61YLR378C HXT5P38695 592 aa8.88□□□□□ -0.99
SEC61YLR378C YJL070CP40361 888 aa8.88□□□□□ -0.99
SEC61YLR378C AIM22P47051 409 aa8.88□□□□□ -0.99
SEC61YLR378C BSC2Q05611 235 aa8.88□□□□□ -0.99
SEC61YLR378C NMD4Q12129 218 aa8.88□□□□□ -0.99
SEC61YLR378C YKL018C-AQ3E7A7 99 aa8.88□□□□□ -0.99
SEC61YLR378C RPT5P33297 434 aaKnown RBP8.87□□□□□ -0.99
SEC61YLR378C YBR241CP38142 488 aa8.87□□□□□ -0.99
SEC61YLR378C FMO1P38866 432 aa8.87□□□□□ -0.99
SEC61YLR378C YHR218WP38899 603 aa8.87□□□□□ -0.99
SEC61YLR378C COQ5P49017 307 aa8.87□□□□□ -0.99
SEC61YLR378C COS12P53053 380 aa8.87□□□□□ -0.99
SEC61YLR378C BIO5P53744 561 aaKnown RBP8.87□□□□□ -0.99
SEC61YLR378C SNO2P53823 222 aa8.87□□□□□ -0.99
SEC61YLR378C YNL095CP53932 642 aa8.87□□□□□ -0.99
SEC61YLR378C AAT1Q01802 451 aa8.87□□□□□ -0.99
SEC61YLR378C SKI8Q02793 397 aaPredicted RBP8.87□□□□□ -0.99
SEC61YLR378C GIP3Q03016 1276 aa8.87□□□□□ -0.99
SEC61YLR378C HPF1Q05164 967 aa8.87□□□□□ -0.99
SEC61YLR378C YOL159CQ08300 171 aa8.87□□□□□ -0.99
SEC61YLR378C TFB4Q12004 338 aa8.87□□□□□ -0.99
SEC61YLR378C PSY3Q12318 242 aa8.87□□□□□ -0.99
SEC61YLR378C TY4B-PA0A0B7P3V8 1104 aa8.86□□□□□ -0.99
SEC61YLR378C MDM35O60200 86 aa8.86□□□□□ -0.99
SEC61YLR378C SIS1P25294 352 aaKnown RBP8.86□□□□□ -0.99
SEC61YLR378C YHL012WP38709 493 aa8.86□□□□□ -0.99
SEC61YLR378C KXD1P53158 218 aa8.86□□□□□ -0.99
SEC61YLR378C YNR021WP53723 404 aaKnown RBP8.86□□□□□ -0.99
SEC61YLR378C YPL113CQ02961 396 aa8.86□□□□□ -0.99
SEC61YLR378C PEX12Q04370 399 aa8.86□□□□□ -0.99
SEC61YLR378C GET4Q12125 312 aa8.86□□□□□ -0.99
SEC61YLR378C SNF8Q12483 233 aa8.86□□□□□ -0.99
SEC61YLR378C MEX67Q99257 599 aaKnown RBP8.86□□□□□ -0.99
SEC61YLR378C Q0010Q9ZZX9 128 aa8.86□□□□□ -0.99
SEC61YLR378C RAP1P11938 827 aa8.85□□□□□ -0.99
SEC61YLR378C CMK2P22517 447 aa8.85□□□□□ -0.99
SEC61YLR378C SPB1P25582 841 aaPredicted RBP8.85□□□□□ -0.99
SEC61YLR378C CDC3P32457 520 aaKnown RBP8.85□□□□□ -0.99
SEC61YLR378C SPT16P32558 1035 aaKnown RBP8.85□□□□□ -0.99
SEC61YLR378C CDC5P32562 705 aa8.85□□□□□ -0.99
SEC61YLR378C MGM101P32787 269 aaKnown RBP8.85□□□□□ -0.99
SEC61YLR378C UGP1P32861 499 aaKnown RBP8.85□□□□□ -0.99
SEC61YLR378C SKG1P36169 355 aa8.85□□□□□ -0.99
SEC61YLR378C SLM4P38247 162 aa8.85□□□□□ -0.99
SEC61YLR378C ATG7P38862 630 aa8.85□□□□□ -0.99
SEC61YLR378C ASI2P53895 289 aa8.85□□□□□ -0.99
SEC61YLR378C YMR226CQ05016 267 aaKnown RBP8.85□□□□□ -0.99
SEC61YLR378C NDL1Q06568 189 aa8.85□□□□□ -0.99
SEC61YLR378C SUL2Q12325 893 aa8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms