RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B TOM20P35180 183 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YBR220CP38318 560 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YHR218WP38899 603 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YJR012CP47087 207 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B CGI121Q03705 181 aaKnown RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B YLR352WQ06479 807 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B AIM39Q08223 395 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YBL111CQ3E7Y5 667 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YDR034W-BQ6Q5X2 51 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B PAB1P04147 577 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
YLR227W-BYLR227W-B PPR1P07272 904 aaPredicted RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B REV1P12689 985 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B PMT2P31382 759 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B SLC1P33333 303 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B PHO11P35842 467 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B RMA1P36001 430 aaKnown RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B PHO12P38693 467 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B NUP82P40368 713 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YLR460CP54007 376 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YPL068CQ02749 293 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B UME1Q03010 460 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YDR514CQ04408 483 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B SRO7Q12038 1033 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B GPM1P00950 247 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B INH1P01097 85 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B FUM1P08417 488 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B YML003WP0CF16 290 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B PGI1P12709 554 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B PMT1P33775 817 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B MRX1P40050 688 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B SRL1Q08673 210 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B YOR376WQ08900 122 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B THP3Q12049 470 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B UTP10P42945 1769 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B RAD51P25454 400 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B KNS1P32350 737 aaPredicted RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B MTC7P32633 139 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B PTH2P34222 208 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B GRE3P38715 327 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
YLR227W-BYLR227W-B NEO1P40527 1151 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B SEC27P41811 889 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B SSU1P41930 458 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B LYS20P48570 428 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B CDD1Q06549 142 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B UPC2Q12151 913 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B CDC33P07260 213 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B ARP2P32381 391 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B JNM1P36224 373 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B MTC4P38335 694 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B UTP18P40362 594 aaPredicted RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B CTK3P46963 296 aaPredicted RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B VAC7P53950 1165 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B YOL159CQ08300 171 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B MED2Q12124 431 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B YIL046W-AQ3E7Z4 54 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B TIM9O74700 87 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B PHO84P25297 587 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B YMC2P38087 329 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B FTH1P38310 465 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B SGF73P53165 657 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B MEP3P53390 489 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B TDA7P53882 636 aaPredicted RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B UTP21Q06078 939 aaPredicted RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B RRP40Q08285 240 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B PAR32Q12515 295 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B YCR075W-AQ3E830 75 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B STE7P06784 515 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B ISC10P32645 267 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B RAD5P32849 1169 aaPredicted RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B SWH1P35845 1188 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B QDR2P40474 542 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B IDP2P41939 412 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B CAF16P43569 289 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B EMC2P47133 292 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B KXD1P53158 218 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B PBP1P53297 722 aaKnown RBP3.35□□□□□ -1.87
YLR227W-BYLR227W-B HST1P53685 503 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B YPR091CQ06833 770 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B GYP1Q08484 637 aa3.35□□□□□ -1.87
YLR227W-BYLR227W-B PHO4P07270 312 aaKnown RBP3.34□□□□□ -1.87
YLR227W-BYLR227W-B ALG1P16661 449 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B TDA3P38758 523 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B YIR007WP40566 764 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B YGR066CP53242 292 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B HMO1Q03973 246 aaKnown RBP3.34□□□□□ -1.87
YLR227W-BYLR227W-B HRK1Q08732 759 aaKnown RBP3.34□□□□□ -1.87
YLR227W-BYLR227W-B PET112P33893 541 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B MCX1P38323 520 aaPredicted RBP3.34□□□□□ -1.87
YLR227W-BYLR227W-B BIT2P38346 545 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B IST3P40565 148 aaPredicted RBP3.34□□□□□ -1.87
YLR227W-BYLR227W-B FIG4P42837 879 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B CSN12P47130 423 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B RAD34Q06665 692 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B MMP1Q12372 583 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B YPR015CQ12531 247 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B YOR338WQ99326 363 aa3.34□□□□□ -1.87
YLR227W-BYLR227W-B RPS19AP07280 144 aaKnown RBP3.34□□□□□ -1.88
YLR227W-BYLR227W-B RPS19BP07281 144 aaPredicted RBP3.34□□□□□ -1.88
YLR227W-BYLR227W-B MET16P18408 261 aaPredicted RBP3.34□□□□□ -1.88
YLR227W-BYLR227W-B APL1P27351 700 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms