RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W YGR130CP53278 816 aa2.47□□□□□ -2.01
SDC25YLL016W MPP6P53725 186 aaPredicted RBP2.47□□□□□ -2.01
SDC25YLL016W EFM6P53970 246 aa2.47□□□□□ -2.01
SDC25YLL016W SLU7Q02775 382 aaKnown RBP2.47□□□□□ -2.01
SDC25YLL016W IZH3Q07959 543 aa2.47□□□□□ -2.01
SDC25YLL016W DIS3Q08162 1001 aaKnown RBP2.47□□□□□ -2.01
SDC25YLL016W NOP12Q08208 459 aaKnown RBP2.47□□□□□ -2.01
SDC25YLL016W MRH1Q12117 320 aaPredicted RBP2.47□□□□□ -2.01
SDC25YLL016W UBA1P22515 1024 aaKnown RBP2.46□□□□□ -2.01
SDC25YLL016W LAC1P28496 418 aa2.46□□□□□ -2.01
SDC25YLL016W SKN7P38889 622 aa2.46□□□□□ -2.01
SDC25YLL016W GIP4P39732 760 aa2.46□□□□□ -2.01
SDC25YLL016W ELP2P42935 788 aa2.46□□□□□ -2.01
SDC25YLL016W CHA4P43634 648 aa2.46□□□□□ -2.01
SDC25YLL016W COS5P47187 383 aa2.46□□□□□ -2.01
SDC25YLL016W SPC98P53540 846 aa2.46□□□□□ -2.01
SDC25YLL016W BUD17P53727 317 aa2.46□□□□□ -2.01
SDC25YLL016W SNO2P53823 222 aa2.46□□□□□ -2.01
SDC25YLL016W IST1P53843 298 aaPredicted RBP2.46□□□□□ -2.01
SDC25YLL016W TRS23Q03784 219 aa2.46□□□□□ -2.01
SDC25YLL016W YSH1Q06224 779 aaPredicted RBP2.46□□□□□ -2.01
SDC25YLL016W TDA6Q06466 467 aa2.46□□□□□ -2.01
SDC25YLL016W YDL086WQ07505 273 aa2.46□□□□□ -2.01
SDC25YLL016W YFH1Q07540 174 aa2.46□□□□□ -2.01
SDC25YLL016W COS7Q07788 383 aa2.46□□□□□ -2.01
SDC25YLL016W YPL272CQ08984 517 aa2.46□□□□□ -2.01
SDC25YLL016W BAG7Q12128 409 aa2.46□□□□□ -2.01
SDC25YLL016W INP53Q12271 1107 aa2.46□□□□□ -2.01
SDC25YLL016W CYC7P00045 113 aa2.46□□□□□ -2.02
SDC25YLL016W ILV5P06168 395 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W YMR085WP0CF18 432 aa2.46□□□□□ -2.02
SDC25YLL016W MER1P16523 270 aa2.46□□□□□ -2.02
SDC25YLL016W KAR4P25583 335 aa2.46□□□□□ -2.02
SDC25YLL016W RIM1P32445 135 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W CDC5P32562 705 aa2.46□□□□□ -2.02
SDC25YLL016W OCT1P35999 772 aa2.46□□□□□ -2.02
SDC25YLL016W MIC60P36112 540 aa2.46□□□□□ -2.02
SDC25YLL016W CCL1P37366 393 aa2.46□□□□□ -2.02
SDC25YLL016W END3P39013 349 aa2.46□□□□□ -2.02
SDC25YLL016W VAB2P40003 282 aa2.46□□□□□ -2.02
SDC25YLL016W YFR020WP43600 232 aa2.46□□□□□ -2.02
SDC25YLL016W EMC2P47133 292 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W MCM6P53091 1017 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W DIP5P53388 608 aa2.46□□□□□ -2.02
SDC25YLL016W OCA2P53949 197 aa2.46□□□□□ -2.02
SDC25YLL016W DLT1Q04216 342 aa2.46□□□□□ -2.02
SDC25YLL016W RRT8Q08219 342 aa2.46□□□□□ -2.02
SDC25YLL016W TGS1Q12052 315 aa2.46□□□□□ -2.02
SDC25YLL016W DAP1Q12091 152 aa2.46□□□□□ -2.02
SDC25YLL016W YKL033W-AQ86ZR7 236 aa2.46□□□□□ -2.02
SDC25YLL016W FLO11P08640 1367 aa2.46□□□□□ -2.02
SDC25YLL016W CBP2P03874 630 aaPredicted RBP2.46□□□□□ -2.02
SDC25YLL016W SPS4P09937 338 aa2.46□□□□□ -2.02
SDC25YLL016W HEM1P09950 548 aaPredicted RBP2.46□□□□□ -2.02
SDC25YLL016W RPL31BP0C2H9 113 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W SAM1P10659 382 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W CDC42P19073 191 aa2.46□□□□□ -2.02
SDC25YLL016W BOS1P25385 244 aa2.46□□□□□ -2.02
SDC25YLL016W RAD51P25454 400 aa2.46□□□□□ -2.02
SDC25YLL016W GAR1P28007 205 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W MCM4P30665 933 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W PHO11P35842 467 aa2.46□□□□□ -2.02
SDC25YLL016W KKQ8P36004 724 aa2.46□□□□□ -2.02
SDC25YLL016W PXL1P36166 706 aa2.46□□□□□ -2.02
SDC25YLL016W AAP1P37898 856 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W APL3P38065 1025 aa2.46□□□□□ -2.02
SDC25YLL016W ZTA1P38230 334 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W PHO12P38693 467 aa2.46□□□□□ -2.02
SDC25YLL016W HRB1P38922 454 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SDC25YLL016W PLB1P39105 664 aa2.46□□□□□ -2.02
SDC25YLL016W BAP3P41815 604 aa2.46□□□□□ -2.02
SDC25YLL016W YIP4P53093 235 aa2.46□□□□□ -2.02
SDC25YLL016W LSB1P53281 241 aa2.46□□□□□ -2.02
SDC25YLL016W INP2Q03824 705 aa2.46□□□□□ -2.02
SDC25YLL016W YLR297WQ05899 129 aa2.46□□□□□ -2.02
SDC25YLL016W KAP95Q06142 861 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W MRI1Q06489 411 aaKnown RBP2.46□□□□□ -2.02
SDC25YLL016W THI72Q08579 599 aa2.46□□□□□ -2.02
SDC25YLL016W USV1Q12132 391 aa2.46□□□□□ -2.02
SDC25YLL016W YDR034W-BQ6Q5X2 51 aa2.46□□□□□ -2.02
SDC25YLL016W MTR10Q99189 972 aa2.46□□□□□ -2.02
SDC25YLL016W VPS63O13549 108 aa2.45□□□□□ -2.02
SDC25YLL016W DMC1P25453 334 aa2.45□□□□□ -2.02
SDC25YLL016W CNE1P27825 502 aa2.45□□□□□ -2.02
SDC25YLL016W FAA1P30624 700 aaKnown RBP2.45□□□□□ -2.02
SDC25YLL016W MSS1P32559 526 aaPredicted RBP2.45□□□□□ -2.02
SDC25YLL016W IMD2P38697 523 aaKnown RBP2.45□□□□□ -2.02
SDC25YLL016W MNL1P38888 796 aa2.45□□□□□ -2.02
SDC25YLL016W SSO2P39926 295 aa2.45□□□□□ -2.02
SDC25YLL016W NMD5P46970 1048 aa2.45□□□□□ -2.02
SDC25YLL016W PIB2P53191 635 aa2.45□□□□□ -2.02
SDC25YLL016W NMA2P53204 395 aa2.45□□□□□ -2.02
SDC25YLL016W YGR035CP53222 116 aa2.45□□□□□ -2.02
SDC25YLL016W COP1P53622 1201 aaKnown RBP2.45□□□□□ -2.02
SDC25YLL016W RRB1Q04225 511 aaKnown RBP2.45□□□□□ -2.02
SDC25YLL016W ECM18Q04623 453 aa2.45□□□□□ -2.02
SDC25YLL016W TEN1Q07921 160 aa2.45□□□□□ -2.02
SDC25YLL016W SLK19Q08581 821 aaKnown RBP2.45□□□□□ -2.02
SDC25YLL016W TDH1P00360 332 aaKnown RBP2.45□□□□□ -2.02
SDC25YLL016W ERG11P10614 530 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms