RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	GDA1	P32621	518 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	IMP3	P32899	183 aa	Predicted RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	CTF13	P35203	478 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	TCD2	P36101	447 aa	Known RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	MRP21	P38175	177 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	REV7	P38927	245 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	SUR2	P38992	349 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	SEO1	P39709	593 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	RGI2	P40188	164 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	TES1	P41903	349 aa	Known RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	CTK3	P46963	296 aa	Predicted RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	CSN12	P47130	423 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	EMC4	P53073	190 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	YGL117W	P53133	265 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	PEX13	P80667	386 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	YDR132C	Q03900	495 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	BUD22	Q04347	519 aa	Known RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	DIN7	Q12086	430 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	YPR089W	O13585	888 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	TAL1	P15019	335 aa	Known RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
DOA1	YKL213C	THI4	P32318	326 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	GIP1	P38229	639 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	MTG2	P38860	518 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	GDH3	P39708	457 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	UTP25	P40498	721 aa	Known RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	GLG2	P47011	380 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	PET117	Q02771	107 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	RPN9	Q04062	393 aa	Known RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	SSL1	Q04673	461 aa	Predicted RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	ISR1	Q06098	443 aa	Known RBP	4.81	□□□□□ -1.64
DOA1	YKL213C	OMS1	Q06668	471 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	YFT2	Q06676	274 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	AEP3	Q12089	606 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	YOS9	Q99220	542 aa		4.81	□□□□□ -1.64
DOA1	YKL213C	RAP1	P11938	827 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	YCR016W	P25617	290 aa	Known RBP	4.8	□□□□□ -1.64
DOA1	YKL213C	YCR051W	P25631	222 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	BEM1	P29366	551 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	CYM1	P32898	989 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	LOS1	P33418	1100 aa	Predicted RBP	4.8	□□□□□ -1.64
DOA1	YKL213C	BMT2	P38278	337 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	SSP120	P39931	234 aa	Known RBP	4.8	□□□□□ -1.64
DOA1	YKL213C	EMP65	P40085	556 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	SER33	P40510	469 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	AXL1	P40851	1208 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	ARH1	P48360	493 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	NIT3	P49954	291 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	LCL3	P53153	274 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	BIO4	P53630	237 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	TDA7	P53882	636 aa	Predicted RBP	4.8	□□□□□ -1.64
DOA1	YKL213C	VAC7	P53950	1165 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	SMA1	Q02651	245 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	TFB2	Q02939	513 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	YDR109C	Q04585	715 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	FAR8	Q05040	523 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	TDA5	Q06417	326 aa	Known RBP	4.8	□□□□□ -1.64
DOA1	YKL213C	RRT8	Q08219	342 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	YOR338W	Q99326	363 aa		4.8	□□□□□ -1.64
DOA1	YKL213C	NSP1	P14907	823 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	SRV2	P17555	526 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	RDS2	P19541	446 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	HRR25	P29295	494 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	VMA6	P32366	345 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	RIM1	P32445	135 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	BEM3	P32873	1128 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	IRS4	P36115	615 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	LDB7	P38210	180 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	GND1	P38720	489 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	HXT6	P39003	570 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	HXT7	P39004	570 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	PCF11	P39081	626 aa	Predicted RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	ALG5	P40350	334 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	STB2	P46679	850 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	LOH1	P47055	219 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	DAN4	P47179	1161 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	BPL1	P48445	690 aa	Predicted RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	RBL2	P48606	106 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	YNL143C	P53908	130 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	YMR178W	Q03219	274 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	PPN1	Q04119	674 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	BSC2	Q05611	235 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	SYT1	Q06836	1226 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	YLR053C	Q12026	108 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	MDY2	Q12285	212 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	NCA2	Q12374	616 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	KCS1	Q12494	1050 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	RMD5	Q12508	421 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	UBR1	P19812	1950 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	CBP2	P03874	630 aa	Predicted RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	MET3	P08536	511 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	AMD1	P15274	810 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	DBP3	P20447	523 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	SEC62	P21825	274 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	CLB4	P24871	460 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	NPL6	P32832	435 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	MDL1	P33310	695 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	MSN4	P33749	630 aa		4.79	□□□□□ -1.64
DOA1	YKL213C	EAP1	P36041	632 aa	Known RBP	4.79	□□□□□ -1.64
DOA1	YKL213C	YKL069W	P36088	180 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms