RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W MMS4P38257 691 aa3.96□□□□□ -1.78
CTK1YKL139W VHC1P38329 1120 aa3.96□□□□□ -1.78
CTK1YKL139W LEU5P38702 357 aa3.96□□□□□ -1.78
CTK1YKL139W POP2P39008 433 aa3.96□□□□□ -1.78
CTK1YKL139W VPS25P47142 202 aa3.96□□□□□ -1.78
CTK1YKL139W RMD9P53140 646 aaKnown RBP3.96□□□□□ -1.78
CTK1YKL139W RHO5P53879 331 aaKnown RBP3.96□□□□□ -1.78
CTK1YKL139W IDP3P53982 420 aaKnown RBP3.96□□□□□ -1.78
CTK1YKL139W DCS1Q06151 350 aa3.96□□□□□ -1.78
CTK1YKL139W DIS3Q08162 1001 aaKnown RBP3.96□□□□□ -1.78
CTK1YKL139W AEP3Q12089 606 aa3.96□□□□□ -1.78
CTK1YKL139W YLR112WQ12130 139 aa3.96□□□□□ -1.78
CTK1YKL139W RRD2Q12461 358 aa3.96□□□□□ -1.78
CTK1YKL139W BRR1Q99177 341 aaPredicted RBP3.96□□□□□ -1.78
CTK1YKL139W YPR089WO13585 888 aa3.95□□□□□ -1.78
CTK1YKL139W CYB2P00175 591 aa3.95□□□□□ -1.78
CTK1YKL139W RIP1P08067 215 aa3.95□□□□□ -1.78
CTK1YKL139W YML002WP0CF17 737 aa3.95□□□□□ -1.78
CTK1YKL139W HOM2P13663 365 aaKnown RBP3.95□□□□□ -1.78
CTK1YKL139W TYR1P20049 452 aa3.95□□□□□ -1.78
CTK1YKL139W RPS2P25443 254 aaKnown RBP3.95□□□□□ -1.78
CTK1YKL139W MSP1P28737 362 aa3.95□□□□□ -1.78
CTK1YKL139W ATP11P32453 318 aa3.95□□□□□ -1.78
CTK1YKL139W SYG1P40528 902 aa3.95□□□□□ -1.78
CTK1YKL139W SNO3P43544 222 aa3.95□□□□□ -1.78
CTK1YKL139W RPS0BP46654 252 aaKnown RBP3.95□□□□□ -1.78
CTK1YKL139W YJR154WP47181 346 aa3.95□□□□□ -1.78
CTK1YKL139W COP1P53622 1201 aaKnown RBP3.95□□□□□ -1.78
CTK1YKL139W TOF1P53840 1238 aa3.95□□□□□ -1.78
CTK1YKL139W LGE1Q02796 332 aaKnown RBP3.95□□□□□ -1.78
CTK1YKL139W CTL1Q03220 320 aaKnown RBP3.95□□□□□ -1.78
CTK1YKL139W YLR456WQ06199 204 aa3.95□□□□□ -1.78
CTK1YKL139W POS5Q06892 414 aa3.95□□□□□ -1.78
CTK1YKL139W SSK1Q07084 712 aa3.95□□□□□ -1.78
CTK1YKL139W MED2Q12124 431 aa3.95□□□□□ -1.78
CTK1YKL139W TY1B-AO13527 1196 aaKnown RBP3.94□□□□□ -1.78
CTK1YKL139W MES1P00958 751 aaKnown RBP3.94□□□□□ -1.78
CTK1YKL139W TRX1P22217 103 aaKnown RBP3.94□□□□□ -1.78
CTK1YKL139W BEM1P29366 551 aa3.94□□□□□ -1.78
CTK1YKL139W SNC1P31109 117 aa3.94□□□□□ -1.78
CTK1YKL139W FAD1P38913 306 aa3.94□□□□□ -1.78
CTK1YKL139W POP1P41812 875 aa3.94□□□□□ -1.78
CTK1YKL139W GAT1P43574 510 aa3.94□□□□□ -1.78
CTK1YKL139W YPT11P48559 417 aa3.94□□□□□ -1.78
CTK1YKL139W OCA2P53949 197 aa3.94□□□□□ -1.78
CTK1YKL139W RHO4Q00246 291 aa3.94□□□□□ -1.78
CTK1YKL139W NUP100Q02629 959 aa3.94□□□□□ -1.78
CTK1YKL139W APL5Q08951 932 aaKnown RBP3.94□□□□□ -1.78
CTK1YKL139W SUC2P00724 532 aa3.93□□□□□ -1.78
CTK1YKL139W BAR1P12630 587 aa3.93□□□□□ -1.78
CTK1YKL139W KRE2P27809 442 aa3.93□□□□□ -1.78
CTK1YKL139W SMI1P32566 505 aa3.93□□□□□ -1.78
CTK1YKL139W DAD2P36162 133 aa3.93□□□□□ -1.78
CTK1YKL139W ZTA1P38230 334 aaKnown RBP3.93□□□□□ -1.78
CTK1YKL139W SIF2P38262 535 aa3.93□□□□□ -1.78
CTK1YKL139W VHS2P40463 436 aa3.93□□□□□ -1.78
CTK1YKL139W TFG2P41896 400 aaPredicted RBP3.93□□□□□ -1.78
CTK1YKL139W TOM22P49334 152 aa3.93□□□□□ -1.78
CTK1YKL139W YNL234WP53857 426 aa3.93□□□□□ -1.78
CTK1YKL139W EKI1Q03764 534 aa3.93□□□□□ -1.78
CTK1YKL139W DIC1Q06143 298 aa3.93□□□□□ -1.78
CTK1YKL139W HSP42Q12329 375 aa3.93□□□□□ -1.78
CTK1YKL139W HIF1Q12373 385 aa3.93□□□□□ -1.78
CTK1YKL139W ARO3P14843 370 aaKnown RBP3.93□□□□□ -1.78
CTK1YKL139W VMA2P16140 517 aaKnown RBP3.93□□□□□ -1.78
CTK1YKL139W YAP1P19880 650 aaKnown RBP3.93□□□□□ -1.78
CTK1YKL139W RHB1P25378 209 aa3.93□□□□□ -1.78
CTK1YKL139W GEX1P25596 615 aa3.93□□□□□ -1.78
CTK1YKL139W SIN4P32259 974 aa3.93□□□□□ -1.78
CTK1YKL139W ADH5P38113 351 aaKnown RBP3.93□□□□□ -1.78
CTK1YKL139W YSW1P38280 609 aa3.93□□□□□ -1.78
CTK1YKL139W FLO5P38894 1075 aa3.93□□□□□ -1.78
CTK1YKL139W YIL024CP40543 189 aa3.93□□□□□ -1.78
CTK1YKL139W MLC1P53141 149 aa3.93□□□□□ -1.78
CTK1YKL139W VTC3Q02725 835 aa3.93□□□□□ -1.78
CTK1YKL139W PPM1Q04081 328 aa3.93□□□□□ -1.78
CTK1YKL139W MDM30Q05930 598 aa3.93□□□□□ -1.78
CTK1YKL139W MTR10Q99189 972 aa3.93□□□□□ -1.78
CTK1YKL139W YLR278CQ05854 1341 aa3.92□□□□□ -1.78
CTK1YKL139W SEC63P14906 663 aa3.92□□□□□ -1.78
CTK1YKL139W PHO84P25297 587 aaKnown RBP3.92□□□□□ -1.78
CTK1YKL139W PPZ1P26570 692 aa3.92□□□□□ -1.78
CTK1YKL139W FUN19P28003 413 aaPredicted RBP3.92□□□□□ -1.78
CTK1YKL139W PRP21P32524 280 aaPredicted RBP3.92□□□□□ -1.78
CTK1YKL139W GND1P38720 489 aaKnown RBP3.92□□□□□ -1.78
CTK1YKL139W TOM71P38825 639 aaKnown RBP3.92□□□□□ -1.78
CTK1YKL139W WSS1P38838 269 aa3.92□□□□□ -1.78
CTK1YKL139W YMR124WP39523 943 aaKnown RBP3.92□□□□□ -1.78
CTK1YKL139W ATF1P40353 525 aa3.92□□□□□ -1.78
CTK1YKL139W FET5P43561 622 aa3.92□□□□□ -1.78
CTK1YKL139W ALT2P52892 507 aa3.92□□□□□ -1.78
CTK1YKL139W SEC5P89102 971 aa3.92□□□□□ -1.78
CTK1YKL139W RKM1Q08961 583 aaPredicted RBP3.92□□□□□ -1.78
CTK1YKL139W CRC1Q12289 327 aa3.92□□□□□ -1.78
CTK1YKL139W PGK1P00560 416 aaKnown RBP3.91□□□□□ -1.78
CTK1YKL139W CAR1P00812 333 aaKnown RBP3.91□□□□□ -1.78
CTK1YKL139W STF1P01098 86 aa3.91□□□□□ -1.78
CTK1YKL139W DAP2P18962 818 aa3.91□□□□□ -1.78
CTK1YKL139W GID7P25569 745 aa3.91□□□□□ -1.78
CTK1YKL139W PDR3P33200 976 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms