RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN4	YKL062W	YPT53	P36019	220 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	YBR139W	P38109	508 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	GDT1	P38301	280 aa	Predicted RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	AFG3	P39925	761 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	RTC4	P53850	401 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	UTP6	Q02354	440 aa	Known RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	YML122C	Q03207	126 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	ATC1	Q04005	294 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	GFD1	Q04839	188 aa	Known RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	COQ11	Q05892	277 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	ERG27	Q12452	347 aa	Known RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	YNL162W-A	Q3E7A8	72 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	YLR278C	Q05854	1341 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	PMA2	P19657	947 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	PRE2	P30656	287 aa	Known RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	SEC66	P33754	206 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	KKQ8	P36004	724 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	MSR1	P38714	643 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	SEC31	P38968	1273 aa	Known RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	RTR1	P40084	226 aa	Predicted RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	IME4	P41833	600 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	HXT14	P42833	540 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	COS12	P53053	380 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	YGL185C	P53100	379 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	RMD9	P53140	646 aa	Known RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	YNL134C	P53912	376 aa	Known RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	YLR173W	Q06247	608 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	GGA1	Q06336	557 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	MRI1	Q06489	411 aa	Known RBP	4.07	□□□□□ -1.76
MSN4	YKL062W	ARR2	Q06597	130 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	YLL007C	Q07799	665 aa		4.07	□□□□□ -1.76
MSN4	YKL062W	RTC1	Q08281	1341 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	RNR3	P21672	869 aa	Known RBP	4.06	□□□□□ -1.76
MSN4	YKL062W	PRP45	P28004	379 aa	Predicted RBP	4.06	□□□□□ -1.76
MSN4	YKL062W	YKR015C	P36111	568 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	TCD1	P38756	429 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	CTK2	P46962	323 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	BIO3	P50277	480 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	PGA2	P53903	129 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	YMR102C	Q03177	834 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	SMA2	Q04658	369 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	VTA1	Q06263	330 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	OSW1	Q08692	278 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	YOL107W	Q12239	342 aa		4.06	□□□□□ -1.76
MSN4	YKL062W	PNO1	Q99216	274 aa	Known RBP	4.06	□□□□□ -1.76
MSN4	YKL062W	RPL7A	P05737	244 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	ARD1	P07347	238 aa	Predicted RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	YPK1	P12688	680 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	GEX1	P25596	615 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	BMH2	P34730	273 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	TOM71	P38825	639 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	YJL132W	P47014	750 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	MND1	P53102	219 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	YNL144C	P53907	740 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	RSN1	Q03516	953 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	ACL4	Q03771	387 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	RRB1	Q04225	511 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	STE23	Q06010	1027 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	YLR455W	Q06188	304 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	RPL7B	Q12213	244 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	SSK22	P25390	1331 aa	Predicted RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	AAC1	P04710	309 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	CDC37	P06101	506 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	GPA1	P08539	472 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	SCH9	P11792	824 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	RSR1	P13856	272 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	IDH2	P28241	369 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	MRPL9	P31334	269 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	NDI1	P32340	513 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	PRS1	P32895	427 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	HCS1	P34243	683 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	TCD2	P36101	447 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	YER085C	P40058	173 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	SEC24	P40482	926 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	SHQ1	P40486	507 aa	Predicted RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	YRB2	P40517	327 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	RPA34	P47006	233 aa	Predicted RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	TAX4	P47030	604 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	HSH155	P49955	971 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	RPT4	P53549	437 aa	Known RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	YPL108W	Q02872	168 aa	Predicted RBP	4.05	□□□□□ -1.76
MSN4	YKL062W	THI7	Q05998	598 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	YFH1	Q07540	174 aa		4.05	□□□□□ -1.76
MSN4	YKL062W	YPR089W	O13585	888 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	ARG81	P05085	880 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	SRV2	P17555	526 aa	Known RBP	4.04	□□□□□ -1.76
MSN4	YKL062W	UGA1	P17649	471 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	SAG1	P20840	650 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	YCL068C	P25593	260 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	YIH1	P25637	258 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	CDC15	P27636	974 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	MCM4	P30665	933 aa	Known RBP	4.04	□□□□□ -1.76
MSN4	YKL062W	ARO4	P32449	370 aa	Known RBP	4.04	□□□□□ -1.76
MSN4	YKL062W	MEI5	P32489	222 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	GCD7	P32502	381 aa	Predicted RBP	4.04	□□□□□ -1.76
MSN4	YKL062W	SDH8	P38345	138 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	GTO1	P48239	356 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	YGR117C	P53270	476 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	PRM1	P53835	661 aa		4.04	□□□□□ -1.76
MSN4	YKL062W	HEF3	P53978	1044 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms