RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W DPH2P32461 534 aa5.2□□□□□ -1.58
SPC42YKL042W PHD1P36093 366 aa5.2□□□□□ -1.58
SPC42YKL042W YPK3P38070 525 aa5.2□□□□□ -1.58
SPC42YKL042W POP1P41812 875 aa5.2□□□□□ -1.58
SPC42YKL042W PEX25Q02969 394 aa5.2□□□□□ -1.58
SPC42YKL042W ACL4Q03771 387 aa5.2□□□□□ -1.58
SPC42YKL042W HEL2Q05580 639 aaKnown RBP5.2□□□□□ -1.58
SPC42YKL042W DIC1Q06143 298 aa5.2□□□□□ -1.58
SPC42YKL042W VAM3Q12241 283 aa5.2□□□□□ -1.58
SPC42YKL042W HER1Q12276 1246 aa5.2□□□□□ -1.58
SPC42YKL042W YER190C-BP0CX94 160 aa5.19□□□□□ -1.58
SPC42YKL042W YEL077W-AP0CX95 160 aa5.19□□□□□ -1.58
SPC42YKL042W YGR296C-BP0CX96 160 aa5.19□□□□□ -1.58
SPC42YKL042W YPL283W-BP0CX97 160 aa5.19□□□□□ -1.58
SPC42YKL042W YPR204C-AP0CX98 160 aa5.19□□□□□ -1.58
SPC42YKL042W BRF1P29056 596 aa5.19□□□□□ -1.58
SPC42YKL042W MGM1P32266 881 aa5.19□□□□□ -1.58
SPC42YKL042W LTV1P34078 463 aa5.19□□□□□ -1.58
SPC42YKL042W YHR054CP38780 354 aa5.19□□□□□ -1.58
SPC42YKL042W YMR124WP39523 943 aaKnown RBP5.19□□□□□ -1.58
SPC42YKL042W YMR147WP40218 223 aaKnown RBP5.19□□□□□ -1.58
SPC42YKL042W EFM4P40516 257 aa5.19□□□□□ -1.58
SPC42YKL042W RTS2P40962 232 aa5.19□□□□□ -1.58
SPC42YKL042W RPL15BP54780 204 aaPredicted RBP5.19□□□□□ -1.58
SPC42YKL042W MMR1Q06324 491 aa5.19□□□□□ -1.58
SPC42YKL042W DCI1Q08558 271 aa5.19□□□□□ -1.58
SPC42YKL042W CFT2Q12102 859 aaPredicted RBP5.19□□□□□ -1.58
SPC42YKL042W SUC2P00724 532 aa5.18□□□□□ -1.58
SPC42YKL042W MES1P00958 751 aaKnown RBP5.18□□□□□ -1.58
SPC42YKL042W RPL42AP0CX27 106 aaKnown RBP5.18□□□□□ -1.58
SPC42YKL042W RPL42BP0CX28 106 aaKnown RBP5.18□□□□□ -1.58
SPC42YKL042W ATP10P18496 279 aa5.18□□□□□ -1.58
SPC42YKL042W CLN1P20437 546 aa5.18□□□□□ -1.58
SPC42YKL042W AIM17P23180 465 aaKnown RBP5.18□□□□□ -1.58
SPC42YKL042W RRP7P25368 297 aaPredicted RBP5.18□□□□□ -1.58
SPC42YKL042W PUP2P32379 260 aa5.18□□□□□ -1.58
SPC42YKL042W ATP11P32453 318 aa5.18□□□□□ -1.58
SPC42YKL042W MMS4P38257 691 aa5.18□□□□□ -1.58
SPC42YKL042W VHC1P38329 1120 aa5.18□□□□□ -1.58
SPC42YKL042W ERG7P38604 731 aa5.18□□□□□ -1.58
SPC42YKL042W YMR130WQ04223 302 aa5.18□□□□□ -1.58
SPC42YKL042W GLO2Q05584 274 aa5.18□□□□□ -1.58
SPC42YKL042W APL5Q08951 932 aaKnown RBP5.18□□□□□ -1.58
SPC42YKL042W RPN5Q12250 445 aaKnown RBP5.18□□□□□ -1.58
SPC42YKL042W ARP6Q12509 438 aa5.18□□□□□ -1.58
SPC42YKL042W RIP1P08067 215 aa5.17□□□□□ -1.58
SPC42YKL042W HIR2P32480 875 aa5.17□□□□□ -1.58
SPC42YKL042W GYP6P32806 458 aa5.17□□□□□ -1.58
SPC42YKL042W REC114P32841 428 aa5.17□□□□□ -1.58
SPC42YKL042W CBP4P37267 147 aa5.17□□□□□ -1.58
SPC42YKL042W SYG1P40528 902 aa5.17□□□□□ -1.58
SPC42YKL042W FET5P43561 622 aa5.17□□□□□ -1.58
SPC42YKL042W YGR016WP53209 190 aa5.17□□□□□ -1.58
SPC42YKL042W ESBP6P53918 673 aa5.17□□□□□ -1.58
SPC42YKL042W MED2Q12124 431 aa5.17□□□□□ -1.58
SPC42YKL042W HSP42Q12329 375 aa5.17□□□□□ -1.58
SPC42YKL042W MDM10P18409 493 aa5.16□□□□□ -1.58
SPC42YKL042W SPO7P18410 259 aa5.16□□□□□ -1.58
SPC42YKL042W CAJ1P39101 391 aa5.16□□□□□ -1.58
SPC42YKL042W TFG2P41896 400 aaPredicted RBP5.16□□□□□ -1.58
SPC42YKL042W RPS0BP46654 252 aaKnown RBP5.16□□□□□ -1.58
SPC42YKL042W RPT4P53549 437 aaKnown RBP5.16□□□□□ -1.58
SPC42YKL042W KTR5P53966 522 aaPredicted RBP5.16□□□□□ -1.58
SPC42YKL042W MSS11Q03825 758 aa5.16□□□□□ -1.58
SPC42YKL042W IVY1Q04934 453 aa5.16□□□□□ -1.58
SPC42YKL042W RSF1Q05043 376 aa5.16□□□□□ -1.58
SPC42YKL042W DCS1Q06151 350 aa5.16□□□□□ -1.58
SPC42YKL042W PHO92Q06390 306 aa5.16□□□□□ -1.58
SPC42YKL042W AEP3Q12089 606 aa5.16□□□□□ -1.58
SPC42YKL042W RRD2Q12461 358 aa5.16□□□□□ -1.58
SPC42YKL042W LPD1P09624 499 aaKnown RBP5.15□□□□□ -1.59
SPC42YKL042W KRE2P27809 442 aa5.15□□□□□ -1.59
SPC42YKL042W BEM1P29366 551 aa5.15□□□□□ -1.59
SPC42YKL042W UTR4P32626 227 aa5.15□□□□□ -1.59
SPC42YKL042W PCL6P40038 420 aa5.15□□□□□ -1.59
SPC42YKL042W SER3P40054 469 aa5.15□□□□□ -1.59
SPC42YKL042W YIR016WP40572 265 aa5.15□□□□□ -1.59
SPC42YKL042W BNA3P47039 444 aaKnown RBP5.15□□□□□ -1.59
SPC42YKL042W GPI1P53306 609 aa5.15□□□□□ -1.59
SPC42YKL042W STP1Q00947 519 aa5.15□□□□□ -1.59
SPC42YKL042W SMA1Q02651 245 aa5.15□□□□□ -1.59
SPC42YKL042W MRPL1Q04599 285 aa5.15□□□□□ -1.59
SPC42YKL042W DIS3Q08162 1001 aaKnown RBP5.15□□□□□ -1.59
SPC42YKL042W UAF30Q08747 228 aa5.15□□□□□ -1.59
SPC42YKL042W BSC1Q12140 328 aa5.15□□□□□ -1.59
SPC42YKL042W PTP1P25044 335 aa5.14□□□□□ -1.59
SPC42YKL042W YCR007CP25354 239 aa5.14□□□□□ -1.59
SPC42YKL042W MGR1P25573 417 aa5.14□□□□□ -1.59
SPC42YKL042W FUN19P28003 413 aaPredicted RBP5.14□□□□□ -1.59
SPC42YKL042W SPC34P36131 295 aa5.14□□□□□ -1.59
SPC42YKL042W YJL132WP47014 750 aa5.14□□□□□ -1.59
SPC42YKL042W MDV1P47025 714 aa5.14□□□□□ -1.59
SPC42YKL042W NCS2P53923 493 aaPredicted RBP5.14□□□□□ -1.59
SPC42YKL042W SAM50P53969 484 aa5.14□□□□□ -1.59
SPC42YKL042W BET4Q00618 327 aa5.14□□□□□ -1.59
SPC42YKL042W SLD5Q03406 294 aa5.14□□□□□ -1.59
SPC42YKL042W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
SPC42YKL042W YLR278CQ05854 1341 aa5.14□□□□□ -1.59
SPC42YKL042W GLK1P17709 500 aaKnown RBP5.13□□□□□ -1.59
SPC42YKL042W YCP4P25349 247 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 286.4 ms