RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C INM2Q05533 292 aa3.31□□□□□ -1.88
ATG27YJL178C YTH1Q06102 208 aaPredicted RBP3.31□□□□□ -1.88
ATG27YJL178C RRI2Q12348 645 aa3.31□□□□□ -1.88
ATG27YJL178C ARP6Q12509 438 aa3.31□□□□□ -1.88
ATG27YJL178C HKR1P41809 1802 aa3.3□□□□□ -1.88
ATG27YJL178C FIG2P25653 1609 aa3.3□□□□□ -1.88
ATG27YJL178C MF(ALPHA)1P01149 165 aa3.3□□□□□ -1.88
ATG27YJL178C ARG81P05085 880 aa3.3□□□□□ -1.88
ATG27YJL178C YML002WP0CF17 737 aa3.3□□□□□ -1.88
ATG27YJL178C MRP13P12686 339 aa3.3□□□□□ -1.88
ATG27YJL178C GLN3P18494 730 aa3.3□□□□□ -1.88
ATG27YJL178C SGV1P23293 657 aaKnown RBP3.3□□□□□ -1.88
ATG27YJL178C RPS2P25443 254 aaKnown RBP3.3□□□□□ -1.88
ATG27YJL178C RDS1P25611 832 aa3.3□□□□□ -1.88
ATG27YJL178C IMG1P25626 169 aa3.3□□□□□ -1.88
ATG27YJL178C PEP3P27801 918 aa3.3□□□□□ -1.88
ATG27YJL178C SNC1P31109 117 aa3.3□□□□□ -1.88
ATG27YJL178C RPN12P32496 274 aa3.3□□□□□ -1.88
ATG27YJL178C PHD1P36093 366 aa3.3□□□□□ -1.88
ATG27YJL178C SPC34P36131 295 aa3.3□□□□□ -1.88
ATG27YJL178C RRP3P38712 501 aaKnown RBP3.3□□□□□ -1.88
ATG27YJL178C YER130CP39959 443 aa3.3□□□□□ -1.88
ATG27YJL178C PTR3P43606 678 aa3.3□□□□□ -1.88
ATG27YJL178C RTT103Q05543 409 aa3.3□□□□□ -1.88
ATG27YJL178C DIC1Q06143 298 aa3.3□□□□□ -1.88
ATG27YJL178C BUG1Q12191 341 aa3.3□□□□□ -1.88
ATG27YJL178C CSR2Q12734 1121 aa3.3□□□□□ -1.88
ATG27YJL178C SEM1O94742 89 aa3.29□□□□□ -1.88
ATG27YJL178C SUP35P05453 685 aaKnown RBP3.29□□□□□ -1.88
ATG27YJL178C SEC53P07283 254 aaKnown RBP3.29□□□□□ -1.88
ATG27YJL178C EST1P17214 699 aaPredicted RBP3.29□□□□□ -1.88
ATG27YJL178C OPI1P21957 404 aa3.29□□□□□ -1.88
ATG27YJL178C SSE2P32590 693 aaKnown RBP3.29□□□□□ -1.88
ATG27YJL178C TIF3P34167 436 aaKnown RBP3.29□□□□□ -1.88
ATG27YJL178C YBR144CP34215 104 aa3.29□□□□□ -1.88
ATG27YJL178C YBL055CP34220 418 aaPredicted RBP3.29□□□□□ -1.88
ATG27YJL178C ICS2P38284 255 aa3.29□□□□□ -1.88
ATG27YJL178C CCT6P39079 546 aa3.29□□□□□ -1.88
ATG27YJL178C TMA108P40462 946 aa3.29□□□□□ -1.88
ATG27YJL178C SPO22P40511 975 aa3.29□□□□□ -1.88
ATG27YJL178C SGN1P40561 250 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
ATG27YJL178C HYR1P40581 163 aaKnown RBP3.29□□□□□ -1.88
ATG27YJL178C DIM1P41819 318 aaKnown RBP3.29□□□□□ -1.88
ATG27YJL178C GUF1P46943 645 aa3.29□□□□□ -1.88
ATG27YJL178C SMM1P53720 384 aaKnown RBP3.29□□□□□ -1.88
ATG27YJL178C ARP5P53946 755 aa3.29□□□□□ -1.88
ATG27YJL178C IRC4Q03036 179 aa3.29□□□□□ -1.88
ATG27YJL178C DAP1Q12091 152 aa3.29□□□□□ -1.88
ATG27YJL178C YPL150WQ12152 901 aa3.29□□□□□ -1.88
ATG27YJL178C NOP58Q12499 511 aaKnown RBP3.29□□□□□ -1.88
ATG27YJL178C YMR230W-AQ3E7B5 62 aa3.29□□□□□ -1.88
ATG27YJL178C FLO1P32768 1537 aa3.29□□□□□ -1.88
ATG27YJL178C TOP1P04786 769 aa3.28□□□□□ -1.88
ATG27YJL178C MATALPHA2P0CY08 210 aa3.28□□□□□ -1.88
ATG27YJL178C HMLALPHA2P0CY09 210 aa3.28□□□□□ -1.88
ATG27YJL178C TYR1P20049 452 aa3.28□□□□□ -1.88
ATG27YJL178C VPS1P21576 704 aaKnown RBP3.28□□□□□ -1.88
ATG27YJL178C BUD5P25300 642 aaPredicted RBP3.28□□□□□ -1.88
ATG27YJL178C BOS1P25385 244 aa3.28□□□□□ -1.88
ATG27YJL178C ERG1P32476 496 aaKnown RBP3.28□□□□□ -1.88
ATG27YJL178C PTK1P36002 662 aaPredicted RBP3.28□□□□□ -1.88
ATG27YJL178C RPL32P38061 130 aaKnown RBP3.28□□□□□ -1.88
ATG27YJL178C OSH3P38713 996 aaKnown RBP3.28□□□□□ -1.88
ATG27YJL178C FLC2P39719 783 aa3.28□□□□□ -1.88
ATG27YJL178C AXL1P40851 1208 aa3.28□□□□□ -1.88
ATG27YJL178C MRX6P48564 524 aa3.28□□□□□ -1.88
ATG27YJL178C DUG3P53871 357 aa3.28□□□□□ -1.88
ATG27YJL178C IPI3P53877 555 aa3.28□□□□□ -1.88
ATG27YJL178C YVH1Q02256 364 aaKnown RBP3.28□□□□□ -1.88
ATG27YJL178C YPL014WQ02606 381 aa3.28□□□□□ -1.88
ATG27YJL178C SYF1Q04048 859 aaPredicted RBP3.28□□□□□ -1.88
ATG27YJL178C SSK1Q07084 712 aa3.28□□□□□ -1.88
ATG27YJL178C FMP45Q07651 309 aa3.28□□□□□ -1.88
ATG27YJL178C YEH2Q07950 538 aa3.28□□□□□ -1.88
ATG27YJL178C NMD4Q12129 218 aa3.28□□□□□ -1.88
ATG27YJL178C TIP41Q12199 356 aa3.28□□□□□ -1.88
ATG27YJL178C YPT6Q99260 215 aa3.28□□□□□ -1.88
ATG27YJL178C KRE2P27809 442 aa3.27□□□□□ -1.89
ATG27YJL178C PRO3P32263 286 aaKnown RBP3.27□□□□□ -1.89
ATG27YJL178C ACH1P32316 526 aa3.27□□□□□ -1.89
ATG27YJL178C SMY1P32364 656 aaKnown RBP3.27□□□□□ -1.89
ATG27YJL178C SAC6P32599 642 aaKnown RBP3.27□□□□□ -1.89
ATG27YJL178C YKL100CP34248 587 aa3.27□□□□□ -1.89
ATG27YJL178C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
ATG27YJL178C LAG1P38703 411 aa3.27□□□□□ -1.89
ATG27YJL178C YTA12P40341 825 aa3.27□□□□□ -1.89
ATG27YJL178C YJL068CP40363 299 aa3.27□□□□□ -1.89
ATG27YJL178C FAR3P46671 204 aa3.27□□□□□ -1.89
ATG27YJL178C APT1P49435 187 aaKnown RBP3.27□□□□□ -1.89
ATG27YJL178C YGR127WP53275 312 aa3.27□□□□□ -1.89
ATG27YJL178C BUD32P53323 261 aa3.27□□□□□ -1.89
ATG27YJL178C TDA7P53882 636 aaPredicted RBP3.27□□□□□ -1.89
ATG27YJL178C YMR160WQ03823 816 aa3.27□□□□□ -1.89
ATG27YJL178C MSS11Q03825 758 aa3.27□□□□□ -1.89
ATG27YJL178C YEH1Q07804 573 aa3.27□□□□□ -1.89
ATG27YJL178C FMP40Q08968 688 aaPredicted RBP3.27□□□□□ -1.89
ATG27YJL178C PDH1Q12428 516 aaKnown RBP3.27□□□□□ -1.89
ATG27YJL178C FLO11P08640 1367 aa3.26□□□□□ -1.89
ATG27YJL178C GSC2P40989 1895 aa3.26□□□□□ -1.89
ATG27YJL178C HSP82P02829 709 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms