RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	AIM10	P39965	576 aa	Known RBP	0.9	□□□□□ -2.27
APQ12	YIL040W	SLZ1	P40167	298 aa		0.9	□□□□□ -2.27
APQ12	YIL040W	OGG1	P53397	376 aa	Predicted RBP	0.9	□□□□□ -2.27
APQ12	YIL040W	CBK1	P53894	756 aa		0.9	□□□□□ -2.27
APQ12	YIL040W	MET14	Q02196	202 aa		0.9	□□□□□ -2.27
APQ12	YIL040W	MSC1	Q03104	513 aa		0.9	□□□□□ -2.27
APQ12	YIL040W	SSP2	Q08646	371 aa		0.9	□□□□□ -2.27
APQ12	YIL040W	HSH49	Q99181	213 aa	Predicted RBP	0.9	□□□□□ -2.27
APQ12	YIL040W	TRP1	P00912	224 aa		0.89	□□□□□ -2.27
APQ12	YIL040W	RPB2	P08518	1224 aa	Known RBP	0.89	□□□□□ -2.27
APQ12	YIL040W	UBC1	P21734	215 aa	Known RBP	0.89	□□□□□ -2.27
APQ12	YIL040W	RIB5	P38145	238 aa		0.89	□□□□□ -2.27
APQ12	YIL040W	FAR3	P46671	204 aa		0.89	□□□□□ -2.27
APQ12	YIL040W	PIL1	P53252	339 aa	Known RBP	0.89	□□□□□ -2.27
APQ12	YIL040W	ARC35	P53731	342 aa	Known RBP	0.89	□□□□□ -2.27
APQ12	YIL040W	MRPL13	Q02204	264 aa		0.89	□□□□□ -2.27
APQ12	YIL040W	RCO1	Q04779	684 aa		0.89	□□□□□ -2.27
APQ12	YIL040W	RKM5	Q12367	367 aa		0.89	□□□□□ -2.27
APQ12	YIL040W	GAL1	P04385	528 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	MAS2	P11914	482 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	PHO81	P17442	1178 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	PUP3	P25451	205 aa	Known RBP	0.88	□□□□□ -2.27
APQ12	YIL040W	POP5	P28005	173 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	PTP2	P29461	750 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	IES6	P32617	166 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	MFT1	P33441	392 aa	Known RBP	0.88	□□□□□ -2.27
APQ12	YIL040W	TEF4	P36008	412 aa	Known RBP	0.88	□□□□□ -2.27
APQ12	YIL040W	ALY1	P36117	915 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	BNA4	P38169	460 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	IFA38	P38286	347 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	UME6	P39001	836 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	CIN4	P39110	191 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	YER186C	P40101	306 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	EFM6	P53970	246 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	TFC6	Q06339	672 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	THP1	Q08231	455 aa		0.88	□□□□□ -2.27
APQ12	YIL040W	TMA7	Q3E764	64 aa	Known RBP	0.88	□□□□□ -2.27
APQ12	YIL040W	PEP4	P07267	405 aa	Known RBP	0.87	□□□□□ -2.27
APQ12	YIL040W	YAR066W	P0CX18	203 aa		0.87	□□□□□ -2.27
APQ12	YIL040W	YHR214W	P0CX19	203 aa		0.87	□□□□□ -2.27
APQ12	YIL040W	KGD1	P20967	1014 aa	Known RBP	0.87	□□□□□ -2.27
APQ12	YIL040W	YCR100C	P25606	316 aa		0.87	□□□□□ -2.27
APQ12	YIL040W	BUB3	P26449	341 aa		0.87	□□□□□ -2.27
APQ12	YIL040W	CYS4	P32582	507 aa	Known RBP	0.87	□□□□□ -2.27
APQ12	YIL040W	CNS1	P33313	385 aa		0.87	□□□□□ -2.27
APQ12	YIL040W	APT1	P49435	187 aa	Known RBP	0.87	□□□□□ -2.27
APQ12	YIL040W	MTM1	P53320	366 aa		0.87	□□□□□ -2.27
APQ12	YIL040W	PAP2	P53632	584 aa	Known RBP	0.87	□□□□□ -2.27
APQ12	YIL040W	KEL3	Q08979	651 aa	Predicted RBP	0.87	□□□□□ -2.27
APQ12	YIL040W	MES1	P00958	751 aa	Known RBP	0.86	□□□□□ -2.27
APQ12	YIL040W	MSM1	P22438	575 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	MRP20	P32387	263 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	REC114	P32841	428 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	SHP1	P34223	423 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	YBR225W	P38321	900 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	YHL041W	P38730	149 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	MIG3	P39943	394 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	ISC1	P40015	477 aa	Known RBP	0.86	□□□□□ -2.27
APQ12	YIL040W	ALK1	P43633	760 aa	Known RBP	0.86	□□□□□ -2.27
APQ12	YIL040W	AAD10	P47182	288 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	MRPS16	Q02608	121 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	ODC1	Q03028	310 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	LIP2	Q06005	328 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	MUM3	Q08750	479 aa		0.86	□□□□□ -2.27
APQ12	YIL040W	SSB1	P11484	613 aa	Known RBP	0.85	□□□□□ -2.27
APQ12	YIL040W	XRS2	P33301	854 aa		0.85	□□□□□ -2.27
APQ12	YIL040W	SPT10	P35208	640 aa		0.85	□□□□□ -2.27
APQ12	YIL040W	SSB2	P40150	613 aa	Known RBP	0.85	□□□□□ -2.27
APQ12	YIL040W	SSU1	P41930	458 aa		0.85	□□□□□ -2.27
APQ12	YIL040W	ATP22	P50273	684 aa	Predicted RBP	0.85	□□□□□ -2.27
APQ12	YIL040W	PEX8	P53248	589 aa		0.85	□□□□□ -2.27
APQ12	YIL040W	PCP1	P53259	346 aa		0.85	□□□□□ -2.27
APQ12	YIL040W	MRP51	Q02950	344 aa		0.85	□□□□□ -2.27
APQ12	YIL040W	MF(ALPHA)1	P01149	165 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	SPO7	P18410	259 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	UBP11	P36026	717 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	TCM62	P38228	572 aa	Known RBP	0.84	□□□□□ -2.27
APQ12	YIL040W	LAM5	P43560	674 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	SSN8	P47821	323 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	RRT6	P53117	311 aa	Predicted RBP	0.84	□□□□□ -2.27
APQ12	YIL040W	ZPR1	P53303	486 aa	Known RBP	0.84	□□□□□ -2.27
APQ12	YIL040W	HXT11	P54862	567 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	YPL107W	Q02873	248 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	YDR239C	Q03780	787 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	PPM1	Q04081	328 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	BLS1	Q06071	122 aa		0.84	□□□□□ -2.27
APQ12	YIL040W	RIX7	Q07844	837 aa	Known RBP	0.84	□□□□□ -2.27
APQ12	YIL040W	YEF3	P16521	1044 aa	Known RBP	0.83	□□□□□ -2.28
APQ12	YIL040W	YCK1	P23291	538 aa		0.83	□□□□□ -2.28
APQ12	YIL040W	SSE2	P32590	693 aa	Known RBP	0.83	□□□□□ -2.28
APQ12	YIL040W	RML2	P32611	393 aa		0.83	□□□□□ -2.28
APQ12	YIL040W	CSE2	P33308	149 aa		0.83	□□□□□ -2.28
APQ12	YIL040W	YBR144C	P34215	104 aa		0.83	□□□□□ -2.28
APQ12	YIL040W	ACA1	P39970	489 aa		0.83	□□□□□ -2.28
APQ12	YIL040W	ADA2	Q02336	434 aa		0.83	□□□□□ -2.28
APQ12	YIL040W	TCO89	Q08921	799 aa		0.83	□□□□□ -2.28
APQ12	YIL040W	NBP2	Q12163	236 aa		0.83	□□□□□ -2.28
APQ12	YIL040W	RRD2	Q12461	358 aa		0.83	□□□□□ -2.28
APQ12	YIL040W	BRR1	Q99177	341 aa	Predicted RBP	0.83	□□□□□ -2.28
APQ12	YIL040W	RAD61	Q99359	647 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms