RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	CIK1	Q01649	594 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	OAZ1	Q02803	292 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	SEG1	Q04279	960 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	SWF1	Q04629	336 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	VTA1	Q06263	330 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	IRC3	Q06683	689 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	YDL057W	Q07379	328 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	YDL144C	Q07589	356 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	RRI1	Q12468	440 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	RAV1	P47104	1357 aa		3.76	□□□□□ -1.81
YPT35	YHR105W	URE2	P23202	354 aa	Known RBP	3.75	□□□□□ -1.81
YPT35	YHR105W	CPR2	P23285	205 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	MNE1	P24720	663 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	SPB1	P25582	841 aa	Predicted RBP	3.75	□□□□□ -1.81
YPT35	YHR105W	YME2	P32843	850 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	RXT2	P38255	430 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	PHO90	P39535	881 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	XBP1	P40489	647 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	EFM4	P40516	257 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	SNG1	P46950	547 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	YGL108C	P53139	140 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	MNP1	P53163	194 aa	Predicted RBP	3.75	□□□□□ -1.81
YPT35	YHR105W	COP1	P53622	1201 aa	Known RBP	3.75	□□□□□ -1.81
YPT35	YHR105W	TOF2	Q02208	771 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	KAP120	Q02932	1032 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	GYL1	Q04322	720 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	YDL218W	Q07629	317 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	GPM3	Q12326	303 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	PDH1	Q12428	516 aa	Known RBP	3.75	□□□□□ -1.81
YPT35	YHR105W	TRM3	Q07527	1436 aa		3.75	□□□□□ -1.81
YPT35	YHR105W	RAD52	P06778	471 aa	Known RBP	3.74	□□□□□ -1.81
YPT35	YHR105W	MSP1	P28737	362 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	MSN2	P33748	704 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	APE3	P37302	537 aa	Known RBP	3.74	□□□□□ -1.81
YPT35	YHR105W	YHR210C	P38893	341 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	MBB1	P39534	108 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	TIF4631	P39935	952 aa	Known RBP	3.74	□□□□□ -1.81
YPT35	YHR105W	FMS1	P50264	508 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	YGR016W	P53209	190 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	SOL4	P53315	255 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	HEF3	P53978	1044 aa	Known RBP	3.74	□□□□□ -1.81
YPT35	YHR105W	IDP3	P53982	420 aa	Known RBP	3.74	□□□□□ -1.81
YPT35	YHR105W	YVH1	Q02256	364 aa	Known RBP	3.74	□□□□□ -1.81
YPT35	YHR105W	ORM2	Q06144	216 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	YLR112W	Q12130	139 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	SPO14	P36126	1683 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	DOP1	Q03921	1698 aa		3.74	□□□□□ -1.81
YPT35	YHR105W	BUD3	P25558	1636 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	YPT1	P01123	206 aa	Known RBP	3.73	□□□□□ -1.81
YPT35	YHR105W	TPM1	P17536	199 aa	Known RBP	3.73	□□□□□ -1.81
YPT35	YHR105W	SUI2	P20459	304 aa	Known RBP	3.73	□□□□□ -1.81
YPT35	YHR105W	REC107	P21651	314 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	PPZ1	P26570	692 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	ATP11	P32453	318 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	VPH1	P32563	840 aa	Known RBP	3.73	□□□□□ -1.81
YPT35	YHR105W	SHP1	P34223	423 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	SLM4	P38247	162 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	SER3	P40054	469 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	CAK1	P43568	368 aa	Predicted RBP	3.73	□□□□□ -1.81
YPT35	YHR105W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
YPT35	YHR105W	BNA3	P47039	444 aa	Known RBP	3.73	□□□□□ -1.81
YPT35	YHR105W	SMM1	P53720	384 aa	Known RBP	3.73	□□□□□ -1.81
YPT35	YHR105W	MMR1	Q06324	491 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	THP1	Q08231	455 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	APL5	Q08951	932 aa	Known RBP	3.73	□□□□□ -1.81
YPT35	YHR105W	LSP1	Q12230	341 aa	Known RBP	3.73	□□□□□ -1.81
YPT35	YHR105W	HAP1	P0CE41	1502 aa		3.73	□□□□□ -1.81
YPT35	YHR105W	PDR11	P40550	1411 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	YAP1	P19880	650 aa	Known RBP	3.72	□□□□□ -1.81
YPT35	YHR105W	GEX1	P25596	615 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	TFB1	P32776	642 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	MDL1	P33310	695 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	HCS1	P34243	683 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	PIM1	P36775	1133 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	ROT2	P38138	954 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	TCM62	P38228	572 aa	Known RBP	3.72	□□□□□ -1.81
YPT35	YHR105W	SEC28	P40509	296 aa	Known RBP	3.72	□□□□□ -1.81
YPT35	YHR105W	ALK1	P43633	760 aa	Known RBP	3.72	□□□□□ -1.81
YPT35	YHR105W	ECM27	P47144	725 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	YGR149W	P48236	432 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	UBP8	P50102	471 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	DUG3	P53871	357 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	YPL014W	Q02606	381 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	NUP100	Q02629	959 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	ARP10	Q04549	284 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	DON1	Q05610	365 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	DIC1	Q06143	298 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	SPE3	Q12074	293 aa	Known RBP	3.72	□□□□□ -1.81
YPT35	YHR105W	CRC1	Q12289	327 aa		3.72	□□□□□ -1.81
YPT35	YHR105W	RPA190	P10964	1664 aa	Known RBP	3.71	□□□□□ -1.81
YPT35	YHR105W	YSP2	Q06681	1438 aa		3.71	□□□□□ -1.82
YPT35	YHR105W	MLP1	Q02455	1875 aa	Known RBP	3.71	□□□□□ -1.82
YPT35	YHR105W	YPR089W	O13585	888 aa		3.71	□□□□□ -1.82
YPT35	YHR105W	SUC2	P00724	532 aa		3.71	□□□□□ -1.82
YPT35	YHR105W	YER190C-B	P0CX94	160 aa		3.71	□□□□□ -1.82
YPT35	YHR105W	YEL077W-A	P0CX95	160 aa		3.71	□□□□□ -1.82
YPT35	YHR105W	YGR296C-B	P0CX96	160 aa		3.71	□□□□□ -1.82
YPT35	YHR105W	YPL283W-B	P0CX97	160 aa		3.71	□□□□□ -1.82
YPT35	YHR105W	YPR204C-A	P0CX98	160 aa		3.71	□□□□□ -1.82
YPT35	YHR105W	RAD14	P28519	371 aa		3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms