RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W TIF4631P39935 952 aaKnown RBP2.65□□□□□ -1.99
RPF1YHR088W RSN1Q03516 953 aa2.65□□□□□ -1.99
RPF1YHR088W HRI1Q05905 244 aaKnown RBP2.65□□□□□ -1.99
RPF1YHR088W THP3Q12049 470 aaKnown RBP2.65□□□□□ -1.99
RPF1YHR088W HSC82P15108 705 aaKnown RBP2.64□□□□□ -1.99
RPF1YHR088W SPS22P25380 463 aa2.64□□□□□ -1.99
RPF1YHR088W GLC7P32598 312 aaKnown RBP2.64□□□□□ -1.99
RPF1YHR088W MRS6P32864 603 aaKnown RBP2.64□□□□□ -1.99
RPF1YHR088W AXL2P38928 823 aa2.64□□□□□ -1.99
RPF1YHR088W RRT5P43607 289 aa2.64□□□□□ -1.99
RPF1YHR088W RAD30Q04049 632 aa2.64□□□□□ -1.99
RPF1YHR088W YDL012CQ12489 107 aa2.64□□□□□ -1.99
RPF1YHR088W DAL2P25335 343 aa2.63□□□□□ -1.99
RPF1YHR088W FRE2P36033 711 aa2.63□□□□□ -1.99
RPF1YHR088W RRN3P36070 627 aa2.63□□□□□ -1.99
RPF1YHR088W PIM1P36775 1133 aa2.63□□□□□ -1.99
RPF1YHR088W MIX23P38162 196 aa2.63□□□□□ -1.99
RPF1YHR088W GCD10P41814 478 aa2.63□□□□□ -1.99
RPF1YHR088W AVT4P50944 713 aa2.63□□□□□ -1.99
RPF1YHR088W CBK1P53894 756 aa2.63□□□□□ -1.99
RPF1YHR088W PEX25Q02969 394 aa2.63□□□□□ -1.99
RPF1YHR088W HER2Q03557 464 aa2.63□□□□□ -1.99
RPF1YHR088W BUB3P26449 341 aa2.62□□□□□ -1.99
RPF1YHR088W UBP11P36026 717 aa2.62□□□□□ -1.99
RPF1YHR088W STB6P36085 766 aa2.62□□□□□ -1.99
RPF1YHR088W MRP21P38175 177 aa2.62□□□□□ -1.99
RPF1YHR088W HEF3P53978 1044 aaKnown RBP2.62□□□□□ -1.99
RPF1YHR088W HAL1Q01766 294 aa2.62□□□□□ -1.99
RPF1YHR088W ODC1Q03028 310 aa2.62□□□□□ -1.99
RPF1YHR088W YML037CQ03703 340 aa2.62□□□□□ -1.99
RPF1YHR088W TSA2Q04120 196 aa2.62□□□□□ -1.99
RPF1YHR088W PRP2P20095 876 aaPredicted RBP2.61□□□□□ -1.99
RPF1YHR088W YBL029WP38201 376 aa2.61□□□□□ -1.99
RPF1YHR088W AFG3P39925 761 aa2.61□□□□□ -1.99
RPF1YHR088W PAN6P40459 309 aa2.61□□□□□ -1.99
RPF1YHR088W SSN8P47821 323 aa2.61□□□□□ -1.99
RPF1YHR088W POP6P53218 158 aa2.61□□□□□ -1.99
RPF1YHR088W ART5P53244 586 aaKnown RBP2.61□□□□□ -1.99
RPF1YHR088W ZPR1P53303 486 aaKnown RBP2.61□□□□□ -1.99
RPF1YHR088W PAH1P32567 862 aa2.6□□□□□ -1.99
RPF1YHR088W ALG5P40350 334 aa2.6□□□□□ -1.99
RPF1YHR088W WWM1P43582 211 aaKnown RBP2.6□□□□□ -1.99
RPF1YHR088W VID30P53076 958 aa2.6□□□□□ -1.99
RPF1YHR088W YSA1Q01976 231 aa2.6□□□□□ -1.99
RPF1YHR088W RNY1Q02933 434 aaKnown RBP2.6□□□□□ -1.99
RPF1YHR088W YPL199CQ08954 240 aa2.6□□□□□ -1.99
RPF1YHR088W RPL19AP0CX82 189 aaKnown RBP2.59□□□□□ -1.99
RPF1YHR088W RPL19BP0CX83 189 aaPredicted RBP2.59□□□□□ -1.99
RPF1YHR088W SEF1P34228 1148 aa2.59□□□□□ -1.99
RPF1YHR088W UTH1P36135 365 aa2.59□□□□□ -1.99
RPF1YHR088W MSR1P38714 643 aa2.59□□□□□ -1.99
RPF1YHR088W PRM5P40476 318 aa2.59□□□□□ -1.99
RPF1YHR088W MRP51Q02950 344 aa2.59□□□□□ -1.99
RPF1YHR088W FIN1Q03898 291 aa2.59□□□□□ -1.99
RPF1YHR088W VIP1Q06685 1146 aaKnown RBP2.59□□□□□ -1.99
RPF1YHR088W SPE4Q12455 300 aa2.59□□□□□ -1.99
RPF1YHR088W YAR066WP0CX18 203 aa2.58□□□□□ -2
RPF1YHR088W YHR214WP0CX19 203 aa2.58□□□□□ -2
RPF1YHR088W KAR3P17119 729 aa2.58□□□□□ -2
RPF1YHR088W GOR1P53839 350 aa2.58□□□□□ -2
RPF1YHR088W PNG1Q02890 363 aa2.58□□□□□ -2
RPF1YHR088W VMS1Q04311 632 aaKnown RBP2.58□□□□□ -2
RPF1YHR088W COQ9Q05779 260 aa2.58□□□□□ -2
RPF1YHR088W SSP2Q08646 371 aa2.58□□□□□ -2
RPF1YHR088W NOP58Q12499 511 aaKnown RBP2.58□□□□□ -2
RPF1YHR088W MRP13P12686 339 aa2.57□□□□□ -2
RPF1YHR088W HSP26P15992 214 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
RPF1YHR088W PCL1P24867 279 aa2.57□□□□□ -2
RPF1YHR088W YCR100CP25606 316 aa2.57□□□□□ -2
RPF1YHR088W MUM2P38236 366 aa2.57□□□□□ -2
RPF1YHR088W ERP2P39704 215 aa2.57□□□□□ -2
RPF1YHR088W IES5P40060 125 aa2.57□□□□□ -2
RPF1YHR088W MUM3Q08750 479 aa2.57□□□□□ -2
RPF1YHR088W FDH1Q08911 376 aa2.57□□□□□ -2
RPF1YHR088W RKM5Q12367 367 aa2.57□□□□□ -2
RPF1YHR088W SGS1P35187 1447 aa2.57□□□□□ -2
RPF1YHR088W MES1P00958 751 aaKnown RBP2.56□□□□□ -2
RPF1YHR088W LEU4P06208 619 aaKnown RBP2.56□□□□□ -2
RPF1YHR088W MNS1P32906 549 aa2.56□□□□□ -2
RPF1YHR088W KKQ8P36004 724 aa2.56□□□□□ -2
RPF1YHR088W CBP4P37267 147 aa2.56□□□□□ -2
RPF1YHR088W CCT6P39079 546 aa2.56□□□□□ -2
RPF1YHR088W SIM1P40472 476 aa2.56□□□□□ -2
RPF1YHR088W AIM22P47051 409 aa2.56□□□□□ -2
RPF1YHR088W SOV1Q04748 898 aa2.56□□□□□ -2
RPF1YHR088W COR1P07256 457 aa2.55□□□□□ -2
RPF1YHR088W YCK1P23291 538 aa2.55□□□□□ -2
RPF1YHR088W ELO2P25358 347 aa2.55□□□□□ -2
RPF1YHR088W POL4P25615 582 aa2.55□□□□□ -2
RPF1YHR088W CHS3P29465 1165 aa2.55□□□□□ -2
RPF1YHR088W ISC1P40015 477 aaKnown RBP2.55□□□□□ -2
RPF1YHR088W DPH1P40487 425 aaKnown RBP2.55□□□□□ -2
RPF1YHR088W IPI3P53877 555 aa2.55□□□□□ -2
RPF1YHR088W YEH1Q07804 573 aa2.55□□□□□ -2
RPF1YHR088W RAD61Q99359 647 aa2.55□□□□□ -2
RPF1YHR088W RAV1P47104 1357 aa2.54□□□□□ -2
RPF1YHR088W MBB1P39534 108 aa2.54□□□□□ -2
RPF1YHR088W OST1P41543 476 aaKnown RBP2.54□□□□□ -2
RPF1YHR088W ATG16Q03818 150 aa2.54□□□□□ -2
RPF1YHR088W YBR126W-AQ8TGU7 68 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms