RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C FOB1O13329 566 aa3.07□□□□□ -1.92
RPN1YHR027C PHR1P05066 565 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
RPN1YHR027C SEC53P07283 254 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C MAS2P11914 482 aa3.07□□□□□ -1.92
RPN1YHR027C PET9P18239 318 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C KAR4P25583 335 aa3.07□□□□□ -1.92
RPN1YHR027C CHS3P29465 1165 aa3.07□□□□□ -1.92
RPN1YHR027C VMA5P31412 392 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C RPD3P32561 433 aa3.07□□□□□ -1.92
RPN1YHR027C MUD1P32605 298 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C GLC3P32775 704 aa3.07□□□□□ -1.92
RPN1YHR027C PDR3P33200 976 aa3.07□□□□□ -1.92
RPN1YHR027C SRB2P34162 210 aa3.07□□□□□ -1.92
RPN1YHR027C AVT5P38176 459 aa3.07□□□□□ -1.92
RPN1YHR027C CBR1P38626 284 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C AIM18P38884 321 aa3.07□□□□□ -1.92
RPN1YHR027C PRM9P39551 298 aa3.07□□□□□ -1.92
RPN1YHR027C RMD6P39975 231 aa3.07□□□□□ -1.92
RPN1YHR027C SLM1P40485 686 aa3.07□□□□□ -1.92
RPN1YHR027C IMA5P40884 581 aa3.07□□□□□ -1.92
RPN1YHR027C HXT8P40886 569 aa3.07□□□□□ -1.92
RPN1YHR027C YJR030CP47101 745 aa3.07□□□□□ -1.92
RPN1YHR027C RNH70P53331 553 aa3.07□□□□□ -1.92
RPN1YHR027C PEX13P80667 386 aa3.07□□□□□ -1.92
RPN1YHR027C IRC4Q03036 179 aa3.07□□□□□ -1.92
RPN1YHR027C YMD8Q03697 442 aa3.07□□□□□ -1.92
RPN1YHR027C AIM36Q03798 255 aa3.07□□□□□ -1.92
RPN1YHR027C TVP15Q03860 143 aa3.07□□□□□ -1.92
RPN1YHR027C KAR5Q04746 504 aa3.07□□□□□ -1.92
RPN1YHR027C RTN1Q04947 295 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C GRS2Q06817 618 aa3.07□□□□□ -1.92
RPN1YHR027C PSF3Q12146 194 aa3.07□□□□□ -1.92
RPN1YHR027C REC8Q12188 680 aa3.07□□□□□ -1.92
RPN1YHR027C MED1Q12321 566 aa3.07□□□□□ -1.92
RPN1YHR027C MMP1Q12372 583 aa3.07□□□□□ -1.92
RPN1YHR027C RPN6Q12377 434 aa3.07□□□□□ -1.92
RPN1YHR027C ISN1Q99312 450 aa3.07□□□□□ -1.92
RPN1YHR027C SAS5Q99314 248 aa3.07□□□□□ -1.92
RPN1YHR027C RIF1P29539 1916 aa3.07□□□□□ -1.92
RPN1YHR027C MOD5P07884 428 aa3.06□□□□□ -1.92
RPN1YHR027C SPS4P09937 338 aa3.06□□□□□ -1.92
RPN1YHR027C RPS24AP0CX31 135 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C RPS24BP0CX32 135 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C FBA1P14540 359 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C FUS3P16892 353 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C FUR1P18562 216 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C MIR1P23641 311 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C RNA15P25299 296 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C YCL049CP25577 312 aa3.06□□□□□ -1.92
RPN1YHR027C YIM1P28625 365 aa3.06□□□□□ -1.92
RPN1YHR027C SIP1P32578 815 aa3.06□□□□□ -1.92
RPN1YHR027C GSP1P32835 219 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C GSP2P32836 220 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C ZRT3P34240 503 aa3.06□□□□□ -1.92
RPN1YHR027C PTC1P35182 281 aa3.06□□□□□ -1.92
RPN1YHR027C POL12P38121 705 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C MAL32P38158 584 aa3.06□□□□□ -1.92
RPN1YHR027C ECM8P38246 354 aa3.06□□□□□ -1.92
RPN1YHR027C IST2P38250 946 aa3.06□□□□□ -1.92
RPN1YHR027C BIG1P38813 335 aa3.06□□□□□ -1.92
RPN1YHR027C YAP1801P38856 637 aa3.06□□□□□ -1.92
RPN1YHR027C SOP4P39543 234 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C PTI1P39927 425 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C LSM4P40070 187 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C TOK1P40310 691 aa3.06□□□□□ -1.92
RPN1YHR027C NEO1P40527 1151 aa3.06□□□□□ -1.92
RPN1YHR027C BUD13P46947 266 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C GTO1P48239 356 aa3.06□□□□□ -1.92
RPN1YHR027C CTR1P49573 406 aa3.06□□□□□ -1.92
RPN1YHR027C COS12P53053 380 aa3.06□□□□□ -1.92
RPN1YHR027C SLD3P53135 668 aa3.06□□□□□ -1.92
RPN1YHR027C POP6P53218 158 aa3.06□□□□□ -1.92
RPN1YHR027C MAL12P53341 584 aa3.06□□□□□ -1.92
RPN1YHR027C HOL1P53389 586 aa3.06□□□□□ -1.92
RPN1YHR027C SPC98P53540 846 aa3.06□□□□□ -1.92
RPN1YHR027C NOG2P53742 486 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C MRPS16Q02608 121 aa3.06□□□□□ -1.92
RPN1YHR027C SEN54Q02825 467 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C RUB1Q03919 77 aa3.06□□□□□ -1.92
RPN1YHR027C ADY4Q05955 493 aa3.06□□□□□ -1.92
RPN1YHR027C DIN7Q12086 430 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-DR4O74302 440 aa3.06□□□□□ -1.92
RPN1YHR027C RPS18AP0CX55 146 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C RPS18BP0CX56 146 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C TY1A-AP0CX57 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-PR1P0CX58 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-ORP0CX59 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-PR2P0CX60 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-DR5P0CX65 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-ER2P0CX66 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-GR3P0CX67 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-LR1P0CX68 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-MR2P0CX69 440 aa3.06□□□□□ -1.92
RPN1YHR027C MRP1P10662 321 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C SNF3P10870 884 aa3.06□□□□□ -1.92
RPN1YHR027C PUT4P15380 627 aa3.06□□□□□ -1.92
RPN1YHR027C MRPL44P19956 98 aa3.06□□□□□ -1.92
RPN1YHR027C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
RPN1YHR027C CDC12P32468 407 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C NAB2P32505 525 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms