RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	MRP4	P32902	394 aa		3.48	□□□□□ -1.85
SPO11	YHL022C	VID27	P40157	782 aa		3.48	□□□□□ -1.85
SPO11	YHL022C	GCD10	P41814	478 aa		3.48	□□□□□ -1.85
SPO11	YHL022C	UPF3	P48412	387 aa	Known RBP	3.48	□□□□□ -1.85
SPO11	YHL022C	VPS38	Q05919	439 aa		3.48	□□□□□ -1.85
SPO11	YHL022C	ENT1	Q12518	454 aa		3.48	□□□□□ -1.85
SPO11	YHL022C	YJR112W-A	Q3E743	109 aa		3.48	□□□□□ -1.85
SPO11	YHL022C	SEM1	O94742	89 aa		3.47	□□□□□ -1.85
SPO11	YHL022C	HIP1	P06775	603 aa		3.47	□□□□□ -1.85
SPO11	YHL022C	BUB3	P26449	341 aa		3.47	□□□□□ -1.85
SPO11	YHL022C	NAM9	P27929	486 aa		3.47	□□□□□ -1.85
SPO11	YHL022C	PAP1	P29468	568 aa	Known RBP	3.47	□□□□□ -1.85
SPO11	YHL022C	ATP11	P32453	318 aa		3.47	□□□□□ -1.85
SPO11	YHL022C	REG2	P38232	338 aa		3.47	□□□□□ -1.85
SPO11	YHL022C	MBB1	P39534	108 aa		3.47	□□□□□ -1.85
SPO11	YHL022C	NOP16	P40007	231 aa	Known RBP	3.47	□□□□□ -1.85
SPO11	YHL022C	YIL067C	P40514	678 aa		3.47	□□□□□ -1.85
SPO11	YHL022C	AVT4	P50944	713 aa		3.47	□□□□□ -1.85
SPO11	YHL022C	DEG1	P31115	442 aa	Known RBP	3.46	□□□□□ -1.86
SPO11	YHL022C	WBP1	P33767	430 aa	Known RBP	3.46	□□□□□ -1.86
SPO11	YHL022C	FRE2	P36033	711 aa		3.46	□□□□□ -1.86
SPO11	YHL022C	NDT80	P38830	627 aa		3.46	□□□□□ -1.86
SPO11	YHL022C	CTI6	Q08923	506 aa		3.46	□□□□□ -1.86
SPO11	YHL022C	RCN2	Q12044	265 aa		3.46	□□□□□ -1.86
SPO11	YHL022C	SPT15	P13393	240 aa	Known RBP	3.45	□□□□□ -1.86
SPO11	YHL022C	CBS1	P14066	229 aa		3.45	□□□□□ -1.86
SPO11	YHL022C	PRD1	P25375	712 aa		3.45	□□□□□ -1.86
SPO11	YHL022C	PEP3	P27801	918 aa		3.45	□□□□□ -1.86
SPO11	YHL022C	YIM1	P28625	365 aa		3.45	□□□□□ -1.86
SPO11	YHL022C	YEL045C	P32616	141 aa		3.45	□□□□□ -1.86
SPO11	YHL022C	PRE5	P40302	234 aa	Known RBP	3.45	□□□□□ -1.86
SPO11	YHL022C	SYG1	P40528	902 aa		3.45	□□□□□ -1.86
SPO11	YHL022C	RRT5	P43607	289 aa		3.45	□□□□□ -1.86
SPO11	YHL022C	ART5	P53244	586 aa	Known RBP	3.45	□□□□□ -1.86
SPO11	YHL022C	CAF130	P53280	1122 aa	Predicted RBP	3.45	□□□□□ -1.86
SPO11	YHL022C	MFB1	Q04922	465 aa		3.45	□□□□□ -1.86
SPO11	YHL022C	HEL2	Q05580	639 aa	Known RBP	3.45	□□□□□ -1.86
SPO11	YHL022C	AVL9	Q12500	764 aa		3.45	□□□□□ -1.86
SPO11	YHL022C	RRP12	Q12754	1228 aa	Known RBP	3.45	□□□□□ -1.86
SPO11	YHL022C	RAV1	P47104	1357 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	HSC82	P15108	705 aa	Known RBP	3.44	□□□□□ -1.86
SPO11	YHL022C	HEM15	P16622	393 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	OLE1	P21147	510 aa	Known RBP	3.44	□□□□□ -1.86
SPO11	YHL022C	MFT1	P33441	392 aa	Known RBP	3.44	□□□□□ -1.86
SPO11	YHL022C	YBL059W	P34224	193 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	SRO77	P38163	1010 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	MUM2	P38236	366 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	FAA2	P39518	744 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	CAF40	P53829	373 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	ELP3	Q02908	557 aa	Known RBP	3.44	□□□□□ -1.86
SPO11	YHL022C	FIN1	Q03898	291 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	PBA1	Q05778	276 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	THP3	Q12049	470 aa	Known RBP	3.44	□□□□□ -1.86
SPO11	YHL022C	TMS1	Q12116	473 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	ERV2	Q12284	196 aa		3.44	□□□□□ -1.86
SPO11	YHL022C	NDI1	P32340	513 aa		3.43	□□□□□ -1.86
SPO11	YHL022C	ERP2	P39704	215 aa		3.43	□□□□□ -1.86
SPO11	YHL022C	YMR147W	P40218	223 aa	Known RBP	3.43	□□□□□ -1.86
SPO11	YHL022C	DOT5	P40553	215 aa		3.43	□□□□□ -1.86
SPO11	YHL022C	POP1	P41812	875 aa		3.43	□□□□□ -1.86
SPO11	YHL022C	YGR066C	P53242	292 aa		3.43	□□□□□ -1.86
SPO11	YHL022C	SLG1	P54867	378 aa		3.43	□□□□□ -1.86
SPO11	YHL022C	SVL3	Q03088	825 aa	Known RBP	3.43	□□□□□ -1.86
SPO11	YHL022C	GLC7	P32598	312 aa	Known RBP	3.42	□□□□□ -1.86
SPO11	YHL022C	RSM22	P36056	628 aa		3.42	□□□□□ -1.86
SPO11	YHL022C	NOP4	P37838	685 aa	Known RBP	3.42	□□□□□ -1.86
SPO11	YHL022C	YFL067W	P43537	175 aa		3.42	□□□□□ -1.86
SPO11	YHL022C	PET130	P47065	347 aa		3.42	□□□□□ -1.86
SPO11	YHL022C	VPS75	P53853	264 aa		3.42	□□□□□ -1.86
SPO11	YHL022C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
SPO11	YHL022C	NAT2	P37293	288 aa		3.41	□□□□□ -1.86
SPO11	YHL022C	SWD3	P38123	315 aa		3.41	□□□□□ -1.86
SPO11	YHL022C	ISC1	P40015	477 aa	Known RBP	3.41	□□□□□ -1.86
SPO11	YHL022C	POP6	P53218	158 aa		3.41	□□□□□ -1.86
SPO11	YHL022C	GOR1	P53839	350 aa		3.41	□□□□□ -1.86
SPO11	YHL022C	MRPL35	Q06678	367 aa		3.41	□□□□□ -1.86
SPO11	YHL022C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
SPO11	YHL022C	TMC1	Q08422	150 aa	Predicted RBP	3.41	□□□□□ -1.86
SPO11	YHL022C	YDL007C-A	Q2V2Q0	85 aa		3.41	□□□□□ -1.86
SPO11	YHL022C	BRR1	Q99177	341 aa	Predicted RBP	3.41	□□□□□ -1.86
SPO11	YHL022C	RPL31B	P0C2H9	113 aa	Known RBP	3.4	□□□□□ -1.87
SPO11	YHL022C	CLN3	P13365	580 aa		3.4	□□□□□ -1.87
SPO11	YHL022C	CPR4	P25334	318 aa		3.4	□□□□□ -1.87
SPO11	YHL022C	MRE11	P32829	692 aa		3.4	□□□□□ -1.87
SPO11	YHL022C	YGR210C	P42942	411 aa		3.4	□□□□□ -1.87
SPO11	YHL022C	BTN2	P53286	410 aa		3.4	□□□□□ -1.87
SPO11	YHL022C	RRN11	Q04712	507 aa		3.4	□□□□□ -1.87
SPO11	YHL022C	PAL1	Q05518	499 aa	Known RBP	3.4	□□□□□ -1.87
SPO11	YHL022C	ESA1	Q08649	445 aa		3.4	□□□□□ -1.87
SPO11	YHL022C	HHF1	P02309	103 aa	Known RBP	3.39	□□□□□ -1.87
SPO11	YHL022C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	not detected
SPO11	YHL022C	YCR100C	P25606	316 aa		3.39	□□□□□ -1.87
SPO11	YHL022C	YEL057C	P39983	233 aa		3.39	□□□□□ -1.87
SPO11	YHL022C	OCA1	P50946	238 aa	Predicted RBP	3.39	□□□□□ -1.87
SPO11	YHL022C	ARE2	P53629	642 aa	Known RBP	3.39	□□□□□ -1.87
SPO11	YHL022C	YDR239C	Q03780	787 aa		3.39	□□□□□ -1.87
SPO11	YHL022C	PDS5	Q04264	1277 aa		3.39	□□□□□ -1.87
SPO11	YHL022C	RRD2	Q12461	358 aa		3.39	□□□□□ -1.87
SPO11	YHL022C	FOB1	O13329	566 aa		3.38	□□□□□ -1.87
SPO11	YHL022C	SUP35	P05453	685 aa	Known RBP	3.38	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms