RNA–Protein interactions for RNA: YGR166W

TRS65, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TRS65, Length 1,683 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS65	YGR166W	RPS10A	Q08745	105 aa	Predicted RBP	0.86	□□□□□ -2.27
TRS65	YGR166W	CTI6	Q08923	506 aa		0.86	□□□□□ -2.27
TRS65	YGR166W	LYS2	P07702	1392 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	YRF1-3	P0CX14	1859 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	YRF1-7	P0CX15	1859 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	YRF1-6	P53819	1859 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	GAL1	P04385	528 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	LCB1	P25045	558 aa	Known RBP	0.85	□□□□□ -2.27
TRS65	YGR166W	NUP120	P35729	1037 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	PIM1	P36775	1133 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	PSD1	P39006	500 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	PKP1	P40530	394 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	SMC3	P47037	1230 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	PYK2	P52489	506 aa	Known RBP	0.85	□□□□□ -2.27
TRS65	YGR166W	RSN1	Q03516	953 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	GLO2	Q05584	274 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	SLM3	Q12093	417 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	YOR019W	Q99248	730 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	FMP27	Q06179	2628 aa		0.85	□□□□□ -2.27
TRS65	YGR166W	ROT2	P38138	954 aa		0.84	□□□□□ -2.27
TRS65	YGR166W	HAT2	P39984	401 aa		0.84	□□□□□ -2.27
TRS65	YGR166W	DPB11	P47027	764 aa	Predicted RBP	0.84	□□□□□ -2.27
TRS65	YGR166W	ASE1	P50275	885 aa		0.84	□□□□□ -2.27
TRS65	YGR166W	PEX8	P53248	589 aa		0.84	□□□□□ -2.27
TRS65	YGR166W	YGR266W	P53326	701 aa		0.84	□□□□□ -2.27
TRS65	YGR166W	IST1	P53843	298 aa	Predicted RBP	0.84	□□□□□ -2.27
TRS65	YGR166W	INN1	P53901	409 aa		0.84	□□□□□ -2.27
TRS65	YGR166W	MET14	Q02196	202 aa		0.84	□□□□□ -2.27
TRS65	YGR166W	YPL014W	Q02606	381 aa		0.84	□□□□□ -2.27
TRS65	YGR166W	TUS1	Q06412	1307 aa		0.84	□□□□□ -2.27
TRS65	YGR166W	ADE6	P38972	1358 aa	Known RBP	0.84	□□□□□ -2.27
TRS65	YGR166W	HXK2	P04807	486 aa	Known RBP	0.84	□□□□□ -2.28
TRS65	YGR166W	APE1	P14904	514 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	PET123	P17558	318 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	ERG8	P24521	451 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	SDH3	P33421	198 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	TFC3	P34111	1160 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	SNU114	P36048	1008 aa	Known RBP	0.84	□□□□□ -2.28
TRS65	YGR166W	OSH3	P38713	996 aa	Known RBP	0.84	□□□□□ -2.28
TRS65	YGR166W	PFK26	P40433	827 aa	Known RBP	0.84	□□□□□ -2.28
TRS65	YGR166W	SEC24	P40482	926 aa	Known RBP	0.84	□□□□□ -2.28
TRS65	YGR166W	YFL067W	P43537	175 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	ARC35	P53731	342 aa	Known RBP	0.84	□□□□□ -2.28
TRS65	YGR166W	BSC5	P53755	489 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	BUD21	Q08492	214 aa	Predicted RBP	0.84	□□□□□ -2.28
TRS65	YGR166W	APL4	Q12028	832 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	INP53	Q12271	1107 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	VCX1	Q99385	411 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	IRA1	P18963	3092 aa		0.84	□□□□□ -2.28
TRS65	YGR166W	RPO41	P13433	1351 aa	Known RBP	0.83	□□□□□ -2.28
TRS65	YGR166W	PMD1	P32634	1753 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	TPK1	P06244	397 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	PUT2	P07275	575 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	HSP104	P31539	908 aa	Known RBP	0.83	□□□□□ -2.28
TRS65	YGR166W	SEF1	P34228	1148 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	IFA38	P38286	347 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	TSC10	P38342	320 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	YHL041W	P38730	149 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	RHO4	Q00246	291 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	REG1	Q00816	1014 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	EMI2	Q04409	500 aa	Known RBP	0.83	□□□□□ -2.28
TRS65	YGR166W	HRI1	Q05905	244 aa	Known RBP	0.83	□□□□□ -2.28
TRS65	YGR166W	TFC6	Q06339	672 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	MLC2	Q06580	163 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	RTT109	Q07794	436 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	PSK2	Q08217	1101 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	SSM4	P40318	1319 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	UTP20	P35194	2493 aa	Known RBP	0.83	□□□□□ -2.28
TRS65	YGR166W	RAV1	P47104	1357 aa		0.83	□□□□□ -2.28
TRS65	YGR166W	CPR4	P25334	318 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	MTR2	P34232	184 aa	Known RBP	0.82	□□□□□ -2.28
TRS65	YGR166W	YKL050C	P35736	922 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	AFG3	P39925	761 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	FMP10	P40098	244 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	VPS27	P40343	622 aa	Known RBP	0.82	□□□□□ -2.28
TRS65	YGR166W	IME4	P41833	600 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	BUD32	P53323	261 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	SMM1	P53720	384 aa	Known RBP	0.82	□□□□□ -2.28
TRS65	YGR166W	RSM23	Q01163	450 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	YMR160W	Q03823	816 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	RPC11	Q04307	110 aa	Predicted RBP	0.82	□□□□□ -2.28
TRS65	YGR166W	BNA5	Q05979	453 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	TSR1	Q07381	788 aa	Known RBP	0.82	□□□□□ -2.28
TRS65	YGR166W	TY3A-G	Q12173	290 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	TMA7	Q3E764	64 aa	Known RBP	0.82	□□□□□ -2.28
TRS65	YGR166W	TY3A-I	Q99219	290 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	IRA2	P19158	3079 aa		0.82	□□□□□ -2.28
TRS65	YGR166W	CHS1	P08004	1131 aa		0.81	□□□□□ -2.28
TRS65	YGR166W	SSB1	P11484	613 aa	Known RBP	0.81	□□□□□ -2.28
TRS65	YGR166W	APA1	P16550	321 aa	Known RBP	0.81	□□□□□ -2.28
TRS65	YGR166W	PUP3	P25451	205 aa	Known RBP	0.81	□□□□□ -2.28
TRS65	YGR166W	YCL049C	P25577	312 aa		0.81	□□□□□ -2.28
TRS65	YGR166W	PTP2	P29461	750 aa		0.81	□□□□□ -2.28
TRS65	YGR166W	DRE2	P36152	348 aa		0.81	□□□□□ -2.28
TRS65	YGR166W	NPR3	P38742	1146 aa		0.81	□□□□□ -2.28
TRS65	YGR166W	YPT35	P38815	214 aa	Known RBP	0.81	□□□□□ -2.28
TRS65	YGR166W	ELO1	P39540	310 aa		0.81	□□□□□ -2.28
TRS65	YGR166W	BUR6	P40096	142 aa		0.81	□□□□□ -2.28
TRS65	YGR166W	SSB2	P40150	613 aa	Known RBP	0.81	□□□□□ -2.28
TRS65	YGR166W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms