RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W ERG10P41338 398 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W CHA4P43634 648 aa3.51□□□□□ -1.85
CAF130YGR134W YFT2Q06676 274 aa3.51□□□□□ -1.85
CAF130YGR134W TRE1Q08919 783 aa3.51□□□□□ -1.85
CAF130YGR134W TIP41Q12199 356 aa3.51□□□□□ -1.85
CAF130YGR134W RPL6BP05739 176 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W RPS16AP0CX51 143 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W RPS16BP0CX52 143 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W RVS161P25343 265 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W UGP1P32861 499 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W SNU114P36048 1008 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W YKR075CP36155 307 aa3.51□□□□□ -1.85
CAF130YGR134W NUP133P36161 1157 aa3.51□□□□□ -1.85
CAF130YGR134W ADE17P38009 592 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W YHR177WP38867 453 aa3.51□□□□□ -1.85
CAF130YGR134W TOS3P43637 560 aa3.51□□□□□ -1.85
CAF130YGR134W PRP31P49704 494 aaPredicted RBP3.51□□□□□ -1.85
CAF130YGR134W PGA2P53903 129 aa3.51□□□□□ -1.85
CAF130YGR134W YNL144CP53907 740 aa3.51□□□□□ -1.85
CAF130YGR134W RPL6AQ02326 176 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W YMR178WQ03219 274 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W YLR283WQ05867 314 aa3.51□□□□□ -1.85
CAF130YGR134W AHC1Q12433 566 aa3.51□□□□□ -1.85
CAF130YGR134W LAG2Q92325 660 aa3.51□□□□□ -1.85
CAF130YGR134W RIP1P08067 215 aa3.5□□□□□ -1.85
CAF130YGR134W MET16P18408 261 aaPredicted RBP3.5□□□□□ -1.85
CAF130YGR134W VPS34P22543 875 aa3.5□□□□□ -1.85
CAF130YGR134W AMD2P22580 549 aa3.5□□□□□ -1.85
CAF130YGR134W ADE1P27616 306 aa3.5□□□□□ -1.85
CAF130YGR134W BNA4P38169 460 aa3.5□□□□□ -1.85
CAF130YGR134W SIP3P38717 1229 aa3.5□□□□□ -1.85
CAF130YGR134W AFG3P39925 761 aa3.5□□□□□ -1.85
CAF130YGR134W UTP18P40362 594 aaPredicted RBP3.5□□□□□ -1.85
CAF130YGR134W AIM22P47051 409 aa3.5□□□□□ -1.85
CAF130YGR134W URB2P47108 1174 aa3.5□□□□□ -1.85
CAF130YGR134W MND1P53102 219 aa3.5□□□□□ -1.85
CAF130YGR134W YGR054WP53235 642 aaKnown RBP3.5□□□□□ -1.85
CAF130YGR134W SKO1Q02100 647 aa3.5□□□□□ -1.85
CAF130YGR134W SHR3Q02774 210 aa3.5□□□□□ -1.85
CAF130YGR134W TPP1Q03796 238 aa3.5□□□□□ -1.85
CAF130YGR134W TY1A-MR1Q04215 440 aa3.5□□□□□ -1.85
CAF130YGR134W POS5Q06892 414 aa3.5□□□□□ -1.85
CAF130YGR134W LAS17Q12446 633 aa3.5□□□□□ -1.85
CAF130YGR134W PAA1Q12447 191 aaKnown RBP3.5□□□□□ -1.85
CAF130YGR134W ECM3Q99252 613 aa3.5□□□□□ -1.85
CAF130YGR134W PDR11P40550 1411 aa3.5□□□□□ -1.85
CAF130YGR134W YLR415CO13578 112 aa3.5□□□□□ -1.85
CAF130YGR134W CDC37P06101 506 aaKnown RBP3.5□□□□□ -1.85
CAF130YGR134W RPO26P20435 155 aa3.5□□□□□ -1.85
CAF130YGR134W SGV1P23293 657 aaKnown RBP3.5□□□□□ -1.85
CAF130YGR134W PEX1P24004 1043 aa3.5□□□□□ -1.85
CAF130YGR134W RFA2P26754 273 aaKnown RBP3.5□□□□□ -1.85
CAF130YGR134W IMP3P32899 183 aaPredicted RBP3.5□□□□□ -1.85
CAF130YGR134W AAP1P37898 856 aaKnown RBP3.5□□□□□ -1.85
CAF130YGR134W GPI16P38875 610 aa3.5□□□□□ -1.85
CAF130YGR134W PLB2Q03674 706 aa3.5□□□□□ -1.85
CAF130YGR134W NUS1Q12063 375 aa3.5□□□□□ -1.85
CAF130YGR134W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
CAF130YGR134W BNR1P40450 1375 aa3.5□□□□□ -1.85
CAF130YGR134W ILV5P06168 395 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W RPS4AP0CX35 261 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W RPS4BP0CX36 261 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W CLN1P20437 546 aa3.49□□□□□ -1.85
CAF130YGR134W FRE1P32791 686 aa3.49□□□□□ -1.85
CAF130YGR134W COT1P32798 439 aa3.49□□□□□ -1.85
CAF130YGR134W MRPL7P36519 292 aa3.49□□□□□ -1.85
CAF130YGR134W SDH8P38345 138 aa3.49□□□□□ -1.85
CAF130YGR134W DIA4P38705 446 aaPredicted RBP3.49□□□□□ -1.85
CAF130YGR134W WSS1P38838 269 aa3.49□□□□□ -1.85
CAF130YGR134W FAD1P38913 306 aa3.49□□□□□ -1.85
CAF130YGR134W YTA12P40341 825 aa3.49□□□□□ -1.85
CAF130YGR134W MAF1P41910 395 aa3.49□□□□□ -1.85
CAF130YGR134W TRF5P48561 642 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W VPS73P53142 486 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W FRE5Q08908 694 aa3.49□□□□□ -1.85
CAF130YGR134W BCK1Q01389 1478 aa3.49□□□□□ -1.85
CAF130YGR134W HOM2P13663 365 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W RSR1P13856 272 aa3.49□□□□□ -1.85
CAF130YGR134W MAE1P36013 669 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W TAT1P38085 619 aa3.49□□□□□ -1.85
CAF130YGR134W PIH1P38768 344 aa3.49□□□□□ -1.85
CAF130YGR134W AKR1P39010 764 aa3.49□□□□□ -1.85
CAF130YGR134W PHM8P40025 321 aa3.49□□□□□ -1.85
CAF130YGR134W OYE3P41816 400 aaPredicted RBP3.49□□□□□ -1.85
CAF130YGR134W RPA34P47006 233 aaPredicted RBP3.49□□□□□ -1.85
CAF130YGR134W BRO1P48582 844 aa3.49□□□□□ -1.85
CAF130YGR134W CTR1P49573 406 aa3.49□□□□□ -1.85
CAF130YGR134W RRB1Q04225 511 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W RRG8Q06109 277 aa3.49□□□□□ -1.85
CAF130YGR134W RPS10AQ08745 105 aaPredicted RBP3.49□□□□□ -1.85
CAF130YGR134W CDC36P06100 191 aaPredicted RBP3.49□□□□□ -1.85
CAF130YGR134W RPL35AP0CX84 120 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W RPL35BP0CX85 120 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W PSO2P30620 661 aa3.49□□□□□ -1.85
CAF130YGR134W HES1P35843 434 aa3.49□□□□□ -1.85
CAF130YGR134W PRM1P53835 661 aa3.49□□□□□ -1.85
CAF130YGR134W BUD22Q04347 519 aaKnown RBP3.49□□□□□ -1.85
CAF130YGR134W IZH3Q07959 543 aa3.49□□□□□ -1.85
CAF130YGR134W CRT10Q08226 957 aa3.49□□□□□ -1.85
CAF130YGR134W TRM13Q12383 476 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms