RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W AMD1P15274 810 aaKnown RBP3.74□□□□□ -1.81
PRP18YGR006W SPB1P25582 841 aaPredicted RBP3.74□□□□□ -1.81
PRP18YGR006W SEC1P30619 724 aaKnown RBP3.74□□□□□ -1.81
PRP18YGR006W AFG1P32317 509 aa3.74□□□□□ -1.81
PRP18YGR006W MPE1P35728 441 aaKnown RBP3.74□□□□□ -1.81
PRP18YGR006W CBP4P37267 147 aa3.74□□□□□ -1.81
PRP18YGR006W LSM5P40089 93 aaKnown RBP3.74□□□□□ -1.81
PRP18YGR006W DLD2P46681 530 aaKnown RBP3.74□□□□□ -1.81
PRP18YGR006W IKS1P47042 667 aa3.74□□□□□ -1.81
PRP18YGR006W OCA1P50946 238 aaPredicted RBP3.74□□□□□ -1.81
PRP18YGR006W YGL108CP53139 140 aa3.74□□□□□ -1.81
PRP18YGR006W MNP1P53163 194 aaPredicted RBP3.74□□□□□ -1.81
PRP18YGR006W YMR087WQ04299 284 aa3.74□□□□□ -1.81
PRP18YGR006W RBS1Q05672 457 aaKnown RBP3.74□□□□□ -1.81
PRP18YGR006W MRPL51Q06090 140 aaPredicted RBP3.74□□□□□ -1.81
PRP18YGR006W SYO1Q07395 620 aa3.74□□□□□ -1.81
PRP18YGR006W NRT1Q08485 598 aa3.74□□□□□ -1.81
PRP18YGR006W YDL009CQ12210 107 aa3.74□□□□□ -1.81
PRP18YGR006W YOL159C-AQ3E769 90 aa3.74□□□□□ -1.81
PRP18YGR006W RPL3P14126 387 aaKnown RBP3.73□□□□□ -1.81
PRP18YGR006W GLK1P17709 500 aaKnown RBP3.73□□□□□ -1.81
PRP18YGR006W REC107P21651 314 aa3.73□□□□□ -1.81
PRP18YGR006W BUD14P27637 709 aa3.73□□□□□ -1.81
PRP18YGR006W GYP6P32806 458 aa3.73□□□□□ -1.81
PRP18YGR006W SIP2P34164 415 aaKnown RBP3.73□□□□□ -1.81
PRP18YGR006W SAS3P34218 831 aa3.73□□□□□ -1.81
PRP18YGR006W HCS1P34243 683 aa3.73□□□□□ -1.81
PRP18YGR006W VPS52P39904 641 aa3.73□□□□□ -1.81
PRP18YGR006W YAT2P40017 923 aa3.73□□□□□ -1.81
PRP18YGR006W YGR149WP48236 432 aa3.73□□□□□ -1.81
PRP18YGR006W RMD9P53140 646 aaKnown RBP3.73□□□□□ -1.81
PRP18YGR006W RPM2Q02773 1202 aa3.73□□□□□ -1.81
PRP18YGR006W VPS74Q06385 345 aa3.73□□□□□ -1.81
PRP18YGR006W CFT2Q12102 859 aaPredicted RBP3.73□□□□□ -1.81
PRP18YGR006W MES1P00958 751 aaKnown RBP3.72□□□□□ -1.81
PRP18YGR006W ATP11P32453 318 aa3.72□□□□□ -1.81
PRP18YGR006W HXT3P32466 567 aaKnown RBP3.72□□□□□ -1.81
PRP18YGR006W FRE1P32791 686 aa3.72□□□□□ -1.81
PRP18YGR006W REC114P32841 428 aa3.72□□□□□ -1.81
PRP18YGR006W POP1P41812 875 aa3.72□□□□□ -1.81
PRP18YGR006W ELP2P42935 788 aa3.72□□□□□ -1.81
PRP18YGR006W RPA49Q01080 415 aaPredicted RBP3.72□□□□□ -1.81
PRP18YGR006W IRC15Q02733 499 aa3.72□□□□□ -1.81
PRP18YGR006W HCR1Q05775 265 aaKnown RBP3.72□□□□□ -1.81
PRP18YGR006W DAP1Q12091 152 aa3.72□□□□□ -1.81
PRP18YGR006W MTF1P14908 341 aaKnown RBP3.71□□□□□ -1.82
PRP18YGR006W PDX1P16451 410 aa3.71□□□□□ -1.82
PRP18YGR006W NDC1P32500 655 aa3.71□□□□□ -1.82
PRP18YGR006W PTR2P32901 601 aa3.71□□□□□ -1.82
PRP18YGR006W GCS1P35197 352 aa3.71□□□□□ -1.82
PRP18YGR006W TUL1P36096 758 aa3.71□□□□□ -1.82
PRP18YGR006W SSU1P41930 458 aa3.71□□□□□ -1.82
PRP18YGR006W FMS1P50264 508 aa3.71□□□□□ -1.82
PRP18YGR006W CRZ1P53968 678 aa3.71□□□□□ -1.82
PRP18YGR006W NDD1Q08887 554 aa3.71□□□□□ -1.82
PRP18YGR006W KEL3Q08979 651 aaPredicted RBP3.71□□□□□ -1.82
PRP18YGR006W YRF1-4O13559 1382 aa3.71□□□□□ -1.82
PRP18YGR006W LEU4P06208 619 aaKnown RBP3.7□□□□□ -1.82
PRP18YGR006W GPH1P06738 902 aaKnown RBP3.7□□□□□ -1.82
PRP18YGR006W YML002WP0CF17 737 aa3.7□□□□□ -1.82
PRP18YGR006W PPH22P23595 377 aa3.7□□□□□ -1.82
PRP18YGR006W IDH2P28241 369 aaKnown RBP3.7□□□□□ -1.82
PRP18YGR006W FAU1P40099 211 aa3.7□□□□□ -1.82
PRP18YGR006W YMR147WP40218 223 aaKnown RBP3.7□□□□□ -1.82
PRP18YGR006W SYG1P40528 902 aa3.7□□□□□ -1.82
PRP18YGR006W VMA13P41807 478 aaKnown RBP3.7□□□□□ -1.82
PRP18YGR006W SOV1Q04748 898 aa3.7□□□□□ -1.82
PRP18YGR006W CYB2P00175 591 aa3.69□□□□□ -1.82
PRP18YGR006W MRS3P10566 314 aa3.69□□□□□ -1.82
PRP18YGR006W ATP10P18496 279 aa3.69□□□□□ -1.82
PRP18YGR006W RPC53P25441 422 aa3.69□□□□□ -1.82
PRP18YGR006W BUB3P26449 341 aa3.69□□□□□ -1.82
PRP18YGR006W FUN19P28003 413 aaPredicted RBP3.69□□□□□ -1.82
PRP18YGR006W NTC20P38302 140 aaPredicted RBP3.69□□□□□ -1.82
PRP18YGR006W KEL1P38853 1164 aaKnown RBP3.69□□□□□ -1.82
PRP18YGR006W RTT101P47050 842 aa3.69□□□□□ -1.82
PRP18YGR006W YGR250CP53316 781 aaKnown RBP3.69□□□□□ -1.82
PRP18YGR006W NCS2P53923 493 aaPredicted RBP3.69□□□□□ -1.82
PRP18YGR006W RLI1Q03195 608 aaKnown RBP3.69□□□□□ -1.82
PRP18YGR006W YMR317WQ04893 1140 aa3.69□□□□□ -1.82
PRP18YGR006W ERP1Q05359 219 aaKnown RBP3.69□□□□□ -1.82
PRP18YGR006W RRP45Q05636 305 aaKnown RBP3.69□□□□□ -1.82
PRP18YGR006W YCR051WP25631 222 aa3.68□□□□□ -1.82
PRP18YGR006W YIM1P28625 365 aa3.68□□□□□ -1.82
PRP18YGR006W DBF4P32325 704 aa3.68□□□□□ -1.82
PRP18YGR006W SPC110P32380 944 aa3.68□□□□□ -1.82
PRP18YGR006W RML2P32611 393 aa3.68□□□□□ -1.82
PRP18YGR006W RSM22P36056 628 aa3.68□□□□□ -1.82
PRP18YGR006W THI2P38141 450 aa3.68□□□□□ -1.82
PRP18YGR006W SHO1P40073 367 aa3.68□□□□□ -1.82
PRP18YGR006W TFG2P41896 400 aaPredicted RBP3.68□□□□□ -1.82
PRP18YGR006W MEP2P41948 499 aa3.68□□□□□ -1.82
PRP18YGR006W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
PRP18YGR006W HSP42Q12329 375 aa3.68□□□□□ -1.82
PRP18YGR006W RPL15AP05748 204 aaKnown RBP3.67□□□□□ -1.82
PRP18YGR006W ADK2P26364 225 aa3.67□□□□□ -1.82
PRP18YGR006W YUR1P26725 428 aa3.67□□□□□ -1.82
PRP18YGR006W PRO3P32263 286 aaKnown RBP3.67□□□□□ -1.82
PRP18YGR006W NIP100P33420 868 aa3.67□□□□□ -1.82
PRP18YGR006W ARA1P38115 344 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms