RNA–Protein interactions for RNA: YGL050W

TYW3, Transcript of tRNA methyltransferase required for synthesis of wybutosine, yeast

Gene TYW3, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TYW3	YGL050W	SEC63	P14906	663 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	CBF1	P17106	351 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	ATP12	P22135	325 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	TSR4	P25040	408 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	BRF1	P29056	596 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	BEM1	P29366	551 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	RIM1	P32445	135 aa	Known RBP	4.59	□□□□□ -1.67
TYW3	YGL050W	PRP18	P33411	251 aa	Predicted RBP	4.59	□□□□□ -1.67
TYW3	YGL050W	LDB7	P38210	180 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	TAE1	P38340	232 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	BAT1	P38891	393 aa	Known RBP	4.59	□□□□□ -1.67
TYW3	YGL050W	SSP120	P39931	234 aa	Known RBP	4.59	□□□□□ -1.67
TYW3	YGL050W	FMP52	P40008	231 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	ALG8	P40351	577 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	IME4	P41833	600 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	TES1	P41903	349 aa	Known RBP	4.59	□□□□□ -1.67
TYW3	YGL050W	GLG2	P47011	380 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	YGL108C	P53139	140 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	PEX8	P53248	589 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	IPI3	P53877	555 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	NUP100	Q02629	959 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	NHP10	Q03435	203 aa		4.59	□□□□□ -1.67
TYW3	YGL050W	HPT1	Q04178	221 aa	Known RBP	4.59	□□□□□ -1.67
TYW3	YGL050W	ADE13	Q05911	482 aa	Known RBP	4.59	□□□□□ -1.67
TYW3	YGL050W	TOR1	P35169	2470 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	COX3	P00420	269 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	YKR104W	P0CE69	306 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	APA1	P16550	321 aa	Known RBP	4.58	□□□□□ -1.68
TYW3	YGL050W	RPB4	P20433	221 aa	Predicted RBP	4.58	□□□□□ -1.68
TYW3	YGL050W	ILV6	P25605	309 aa	Known RBP	4.58	□□□□□ -1.68
TYW3	YGL050W	MSH1	P25846	959 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	MF(ALPHA)2	P32435	120 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	SPS19	P32573	292 aa	Known RBP	4.58	□□□□□ -1.68
TYW3	YGL050W	YSW1	P38280	609 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	RRP3	P38712	501 aa	Known RBP	4.58	□□□□□ -1.68
TYW3	YGL050W	SSZ1	P38788	538 aa	Known RBP	4.58	□□□□□ -1.68
TYW3	YGL050W	YJL206C	P39529	758 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	SAP1	P39955	897 aa	Known RBP	4.58	□□□□□ -1.68
TYW3	YGL050W	RPH1	P39956	796 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	GET2	P40056	285 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	YJL070C	P40361	888 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	URB2	P47108	1174 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	TDA7	P53882	636 aa	Predicted RBP	4.58	□□□□□ -1.68
TYW3	YGL050W	ARX1	Q03862	593 aa	Known RBP	4.58	□□□□□ -1.68
TYW3	YGL050W	ARG7	Q04728	441 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	CDC123	Q05791	360 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	BLS1	Q06071	122 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	GTT2	Q12390	233 aa		4.58	□□□□□ -1.68
TYW3	YGL050W	MSB2	P32334	1306 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	SUC2	P00724	532 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	ARG4	P04076	463 aa	Predicted RBP	4.57	□□□□□ -1.68
TYW3	YGL050W	SIR3	P06701	978 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	SSC1	P0CS90	654 aa	Known RBP	4.57	□□□□□ -1.68
TYW3	YGL050W	HEM15	P16622	393 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	EPT1	P22140	391 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	SNT1	P25357	1226 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	SFP1	P32432	683 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	LTV1	P34078	463 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	YKL100C	P34248	587 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	MTH1	P35198	433 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	SRX1	P36077	127 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	APT2	P36973	181 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	PCL5	P38794	229 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	UTP9	P38882	575 aa	Known RBP	4.57	□□□□□ -1.68
TYW3	YGL050W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
TYW3	YGL050W	HAT2	P39984	401 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	SEC28	P40509	296 aa	Known RBP	4.57	□□□□□ -1.68
TYW3	YGL050W	BIR1	P47134	954 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	COG1	P53079	417 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	GND2	P53319	492 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	TIM44	Q01852	431 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	REC102	Q02721	264 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	CTK1	Q03957	528 aa	Known RBP	4.57	□□□□□ -1.68
TYW3	YGL050W	TAF11	Q04226	346 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	YLR177W	Q06251	628 aa		4.57	□□□□□ -1.68
TYW3	YGL050W	RSR1	P13856	272 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	ABF1	P14164	731 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	RED1	P14291	827 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	CLB1	P24868	471 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	RML2	P32611	393 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	CYM1	P32898	989 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	PMT1	P33775	817 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	ETR1	P38071	380 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	DBP8	P38719	431 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	SPC97	P38863	823 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	CYC2	P38909	366 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	CCT6	P39079	546 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	LSM5	P40089	93 aa	Known RBP	4.56	□□□□□ -1.68
TYW3	YGL050W	YNL195C	P40168	261 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	SMX2	P40204	77 aa	Known RBP	4.56	□□□□□ -1.68
TYW3	YGL050W	TIF34	P40217	347 aa	Known RBP	4.56	□□□□□ -1.68
TYW3	YGL050W	YFL012W	P43580	148 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	SET2	P46995	733 aa	Known RBP	4.56	□□□□□ -1.68
TYW3	YGL050W	YJR142W	P47173	342 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	PAN2	P53010	1115 aa	Predicted RBP	4.56	□□□□□ -1.68
TYW3	YGL050W	TEL2	P53038	688 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	YPL113C	Q02961	396 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	RPC11	Q04307	110 aa	Predicted RBP	4.56	□□□□□ -1.68
TYW3	YGL050W	EMI1	Q04406	187 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	CRN1	Q06440	651 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms