RNA–Protein interactions for RNA: YFL007W

BLM10, Transcript of Proteasome activator, yeast

Gene BLM10, Length 6,432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLM10	YFL007W	YHR122W	P38829	231 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	EDC3	P39998	551 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	YJR011C	P47086	261 aa	Predicted RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	NOG2	P53742	486 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	OPI10	Q08202	246 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	REX4	Q08237	289 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	IRC20	Q06554	1556 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	HSF1	P10961	833 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	MET8	P15807	274 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	ZRC1	P20107	442 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	HRR25	P29295	494 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	VMA6	P32366	345 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	YJR098C	P47139	656 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	SOL4	P53315	255 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	DUS3	Q06053	668 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	PCK1	P10963	549 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	DAL82	P21705	255 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	BUD23	P25627	275 aa	Predicted RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	PPQ1	P32945	549 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	SSH1	P38353	490 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
BLM10	YFL007W	YJL007C	P47080	104 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	DIG2	Q03373	323 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	TDA5	Q06417	326 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	SAM3	Q08986	587 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	SLF1	Q12034	447 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	TRP3	P00937	484 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	CCR4	P31384	837 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	PET127	P32606	800 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	SCD5	P34758	872 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	YAR028W	P39548	234 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	PAC1	P39946	494 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	TED1	P40533	473 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	CAF16	P43569	289 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	YDR222W	Q04925	415 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	RRI1	Q12468	440 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	YLR278C	Q05854	1341 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	GCN2	P15442	1659 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	SCH9	P11792	824 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	CBS2	P14905	389 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	IDP1	P21954	428 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	APT2	P36973	181 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	SAH1	P39954	449 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	NIT1	P40447	199 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	BST1	P43571	1029 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	NCS6	P53088	359 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	DBP6	P53734	629 aa	Known RBP	4.61	□□□□□ -1.67
BLM10	YFL007W	YNL260C	P53846	198 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	YDC1	Q02896	317 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	COS7	Q07788	383 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	CTI6	Q08923	506 aa		4.61	□□□□□ -1.67
BLM10	YFL007W	CHS2	P14180	963 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	RIT1	P23796	513 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	SGF29	P25554	259 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	TCA17	P32613	152 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	SRL3	P36167	246 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	BIT2	P38346	545 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	ROG3	P43602	733 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	YAE1	P47118	141 aa	Predicted RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	BUR2	Q05949	395 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	RTN2	Q12443	393 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	OSM1	P21375	501 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	CHA1	P25379	360 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	ARE1	P25628	610 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	PNT1	P38969	423 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	IRC18	P47056	224 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	ORM1	P53224	222 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	SLM2	P53955	656 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	ALD6	P54115	500 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	YLR179C	Q06252	201 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	PSY3	Q12318	242 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	PAR32	Q12515	295 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	SEC53	P07283	254 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	SPO12	P17123	173 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	MRPL24	P36525	258 aa	Predicted RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	IMD2	P38697	523 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	UME6	P39001	836 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	IME4	P41833	600 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	MIC26	P50087	233 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	SLD5	Q03406	294 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	SSL1	Q04673	461 aa	Predicted RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	FMP25	Q08023	583 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	YDR018C	Q12185	396 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	SIR4	P11978	1358 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
BLM10	YFL007W	SGV1	P23293	657 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	HYP2	P23301	157 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	DTR1	P38125	572 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	YGL101W	P53144	215 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	ROY1	Q04847	553 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	YLR297W	Q05899	129 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	TCO89	Q08921	799 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	PAA1	Q12447	191 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	CCP1	P00431	361 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	DAL7	P21826	554 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	RFA1	P22336	621 aa	Known RBP	4.6	□□□□□ -1.67
BLM10	YFL007W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
BLM10	YFL007W	EFM1	P38732	585 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	BUD17	P53727	317 aa		4.6	□□□□□ -1.67
BLM10	YFL007W	YNL108C	P53929	270 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 553.3 ms