RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W GRX6Q12438 231 aa6.55□□□□□ -1.36
LCP5YER127W SNC1P31109 117 aa6.54□□□□□ -1.36
LCP5YER127W ERG3P32353 365 aa6.54□□□□□ -1.36
LCP5YER127W YKL023WP36103 277 aaKnown RBP6.54□□□□□ -1.36
LCP5YER127W SMF1P38925 575 aa6.54□□□□□ -1.36
LCP5YER127W RTS2P40962 232 aa6.54□□□□□ -1.36
LCP5YER127W EAF6P47128 113 aa6.54□□□□□ -1.36
LCP5YER127W CAF130P53280 1122 aaPredicted RBP6.54□□□□□ -1.36
LCP5YER127W SHR3Q02774 210 aa6.54□□□□□ -1.36
LCP5YER127W SNA4Q07549 140 aa6.54□□□□□ -1.36
LCP5YER127W DSE3Q08729 430 aa6.54□□□□□ -1.36
LCP5YER127W YML133CQ03099 1374 aa6.54□□□□□ -1.36
LCP5YER127W YLL067CQ07888 1374 aa6.54□□□□□ -1.36
LCP5YER127W YLL066CQ99208 1374 aa6.54□□□□□ -1.36
LCP5YER127W PAP1P29468 568 aaKnown RBP6.53□□□□□ -1.36
LCP5YER127W CMC1P36064 111 aa6.53□□□□□ -1.36
LCP5YER127W MUM2P38236 366 aa6.53□□□□□ -1.36
LCP5YER127W ERG7P38604 731 aa6.53□□□□□ -1.36
LCP5YER127W MDG1P53885 366 aa6.53□□□□□ -1.36
LCP5YER127W YPL014WQ02606 381 aa6.53□□□□□ -1.36
LCP5YER127W SMA1Q02651 245 aa6.53□□□□□ -1.36
LCP5YER127W YMR155WQ03795 547 aa6.53□□□□□ -1.36
LCP5YER127W YMR034CQ05131 434 aaPredicted RBP6.53□□□□□ -1.36
LCP5YER127W SFI1Q12369 946 aa6.53□□□□□ -1.36
LCP5YER127W SEC39Q12745 709 aa6.53□□□□□ -1.36
LCP5YER127W MLP1Q02455 1875 aaKnown RBP6.52□□□□□ -1.37
LCP5YER127W PEP5P12868 1029 aa6.52□□□□□ -1.37
LCP5YER127W ELO2P25358 347 aa6.52□□□□□ -1.37
LCP5YER127W MGR1P25573 417 aa6.52□□□□□ -1.37
LCP5YER127W PHD1P36093 366 aa6.52□□□□□ -1.37
LCP5YER127W BYE1P36106 594 aa6.52□□□□□ -1.37
LCP5YER127W GPD2P41911 440 aaKnown RBP6.52□□□□□ -1.37
LCP5YER127W STB2P46679 850 aa6.52□□□□□ -1.37
LCP5YER127W BUD32P53323 261 aa6.52□□□□□ -1.37
LCP5YER127W BET4Q00618 327 aa6.52□□□□□ -1.37
LCP5YER127W YDR415CQ04033 374 aaPredicted RBP6.52□□□□□ -1.37
LCP5YER127W MLH2Q07980 695 aa6.52□□□□□ -1.37
LCP5YER127W NCE102Q12207 173 aaRIP-Chip data6.52□□□□□ -1.37not detected
LCP5YER127W NPL6P32832 435 aa6.51□□□□□ -1.37
LCP5YER127W SHP1P34223 423 aa6.51□□□□□ -1.37
LCP5YER127W DIG1Q03063 452 aaKnown RBP6.51□□□□□ -1.37
LCP5YER127W PDS5Q04264 1277 aa6.51□□□□□ -1.37
LCP5YER127W YMR254CQ04838 102 aa6.51□□□□□ -1.37
LCP5YER127W THP1Q08231 455 aa6.51□□□□□ -1.37
LCP5YER127W PEP4P07267 405 aaKnown RBP6.5□□□□□ -1.37
LCP5YER127W HSP104P31539 908 aaKnown RBP6.5□□□□□ -1.37
LCP5YER127W ATO2P32907 282 aa6.5□□□□□ -1.37
LCP5YER127W AXL1P40851 1208 aa6.5□□□□□ -1.37
LCP5YER127W HXT14P42833 540 aa6.5□□□□□ -1.37
LCP5YER127W ALK1P43633 760 aaKnown RBP6.5□□□□□ -1.37
LCP5YER127W DIC1Q06143 298 aa6.5□□□□□ -1.37
LCP5YER127W BSC1Q12140 328 aa6.5□□□□□ -1.37
LCP5YER127W PGA3Q12746 312 aaKnown RBP6.5□□□□□ -1.37
LCP5YER127W MHP1P43638 1398 aa6.49□□□□□ -1.37
LCP5YER127W YFL068WP0CX99 160 aa6.49□□□□□ -1.37
LCP5YER127W YLL066W-AP0CY00 160 aa6.49□□□□□ -1.37
LCP5YER127W YLL067W-AP0CY01 160 aa6.49□□□□□ -1.37
LCP5YER127W OTU2P38747 307 aaKnown RBP6.49□□□□□ -1.37
LCP5YER127W YHR210CP38893 341 aa6.49□□□□□ -1.37
LCP5YER127W YIL152WP40455 235 aa6.49□□□□□ -1.37
LCP5YER127W FET5P43561 622 aa6.49□□□□□ -1.37
LCP5YER127W AIM22P47051 409 aa6.49□□□□□ -1.37
LCP5YER127W RSF1Q05043 376 aa6.49□□□□□ -1.37
LCP5YER127W YDL007C-AQ2V2Q0 85 aa6.49□□□□□ -1.37
LCP5YER127W YOL159C-AQ3E769 90 aa6.49□□□□□ -1.37
LCP5YER127W RPS2P25443 254 aaKnown RBP6.48□□□□□ -1.37
LCP5YER127W SAS3P34218 831 aa6.48□□□□□ -1.37
LCP5YER127W ARC40P38328 384 aaKnown RBP6.48□□□□□ -1.37
LCP5YER127W RQC1Q05468 723 aaKnown RBP6.48□□□□□ -1.37
LCP5YER127W YIL177CP40434 1758 aa6.47□□□□□ -1.37
LCP5YER127W YJL225CP40889 1758 aa6.47□□□□□ -1.37
LCP5YER127W RPL31BP0C2H9 113 aaKnown RBP6.47□□□□□ -1.37
LCP5YER127W PRP2P20095 876 aaPredicted RBP6.47□□□□□ -1.37
LCP5YER127W CLB3P24870 427 aa6.47□□□□□ -1.37
LCP5YER127W PFF1P38244 976 aa6.47□□□□□ -1.37
LCP5YER127W MBB1P39534 108 aa6.47□□□□□ -1.37
LCP5YER127W RMT2Q03305 412 aa6.47□□□□□ -1.37
LCP5YER127W GLO2Q05584 274 aa6.47□□□□□ -1.37
LCP5YER127W DIB1Q06819 143 aaPredicted RBP6.47□□□□□ -1.37
LCP5YER127W PDH1Q12428 516 aaKnown RBP6.47□□□□□ -1.37
LCP5YER127W ARP6Q12509 438 aa6.47□□□□□ -1.37
LCP5YER127W RAD52P06778 471 aaKnown RBP6.46□□□□□ -1.38
LCP5YER127W COR1P07256 457 aa6.46□□□□□ -1.38
LCP5YER127W LPD1P09624 499 aaKnown RBP6.46□□□□□ -1.38
LCP5YER127W BNA4P38169 460 aa6.46□□□□□ -1.38
LCP5YER127W MET30P39014 640 aa6.46□□□□□ -1.38
LCP5YER127W AZF1P41696 914 aa6.46□□□□□ -1.38
LCP5YER127W ZPR1P53303 486 aaKnown RBP6.46□□□□□ -1.38
LCP5YER127W MPS1P54199 764 aa6.46□□□□□ -1.38
LCP5YER127W SEC5P89102 971 aa6.46□□□□□ -1.38
LCP5YER127W RHO4Q00246 291 aa6.46□□□□□ -1.38
LCP5YER127W YLR352WQ06479 807 aa6.46□□□□□ -1.38
LCP5YER127W FMP45Q07651 309 aa6.46□□□□□ -1.38
LCP5YER127W YOR365CQ08844 703 aa6.46□□□□□ -1.38
LCP5YER127W APL5Q08951 932 aaKnown RBP6.46□□□□□ -1.38
LCP5YER127W AUS1Q08409 1394 aa6.45□□□□□ -1.38
LCP5YER127W RIM15P43565 1770 aa6.45□□□□□ -1.38
LCP5YER127W RPL3P14126 387 aaKnown RBP6.45□□□□□ -1.38
LCP5YER127W HNM1P19807 563 aa6.45□□□□□ -1.38
LCP5YER127W SGV1P23293 657 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms