RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C NUP85P46673 744 aa7.57□□□□□ -1.2
PUP3YER094C SUM1P46676 1062 aa7.57□□□□□ -1.2
PUP3YER094C UPF3P48412 387 aaKnown RBP7.57□□□□□ -1.2
PUP3YER094C YNR021WP53723 404 aaKnown RBP7.57□□□□□ -1.2
PUP3YER094C IRC15Q02733 499 aa7.57□□□□□ -1.2
PUP3YER094C ATP25Q03153 612 aa7.57□□□□□ -1.2
PUP3YER094C YDR444WQ04093 687 aa7.57□□□□□ -1.2
PUP3YER094C HFD1Q04458 532 aa7.57□□□□□ -1.2
PUP3YER094C YML053CQ04978 212 aa7.57□□□□□ -1.2
PUP3YER094C BSC2Q05611 235 aa7.57□□□□□ -1.2
PUP3YER094C YHC1Q05900 231 aaKnown RBP7.57□□□□□ -1.2
PUP3YER094C MUM3Q08750 479 aa7.57□□□□□ -1.2
PUP3YER094C PFA4Q12006 378 aa7.57□□□□□ -1.2
PUP3YER094C SRO7Q12038 1033 aa7.57□□□□□ -1.2
PUP3YER094C RPN5Q12250 445 aaKnown RBP7.57□□□□□ -1.2
PUP3YER094C JLP1Q12358 412 aa7.57□□□□□ -1.2
PUP3YER094C MHT1Q12525 324 aa7.57□□□□□ -1.2
PUP3YER094C MSB2P32334 1306 aa7.56□□□□□ -1.2
PUP3YER094C MDM35O60200 86 aa7.56□□□□□ -1.2
PUP3YER094C ATP2P00830 511 aaKnown RBP7.56□□□□□ -1.2
PUP3YER094C MSS116P15424 664 aaKnown RBP7.56□□□□□ -1.2
PUP3YER094C SIS1P25294 352 aaKnown RBP7.56□□□□□ -1.2
PUP3YER094C ATO2P32907 282 aa7.56□□□□□ -1.2
PUP3YER094C UBP14P38237 781 aaKnown RBP7.56□□□□□ -1.2
PUP3YER094C FTH1P38310 465 aa7.56□□□□□ -1.2
PUP3YER094C PCF11P39081 626 aaPredicted RBP7.56□□□□□ -1.2
PUP3YER094C DIM1P41819 318 aaKnown RBP7.56□□□□□ -1.2
PUP3YER094C YFR020WP43600 232 aa7.56□□□□□ -1.2
PUP3YER094C AIM22P47051 409 aa7.56□□□□□ -1.2
PUP3YER094C COS6P53344 381 aa7.56□□□□□ -1.2
PUP3YER094C MPS1P54199 764 aa7.56□□□□□ -1.2
PUP3YER094C EFR3Q03653 782 aaKnown RBP7.56□□□□□ -1.2
PUP3YER094C SPC2Q04969 178 aa7.56□□□□□ -1.2
PUP3YER094C YFT2Q06676 274 aa7.56□□□□□ -1.2
PUP3YER094C ASA1Q06822 443 aa7.56□□□□□ -1.2
PUP3YER094C HAL9Q12180 1030 aa7.56□□□□□ -1.2
PUP3YER094C RUP1Q12242 671 aa7.56□□□□□ -1.2
PUP3YER094C YLL054CQ12244 843 aa7.56□□□□□ -1.2
PUP3YER094C RPS4AP0CX35 261 aaKnown RBP7.55□□□□□ -1.2
PUP3YER094C RPS4BP0CX36 261 aaKnown RBP7.55□□□□□ -1.2
PUP3YER094C MRP13P12686 339 aa7.55□□□□□ -1.2
PUP3YER094C KIN2P13186 1147 aaKnown RBP7.55□□□□□ -1.2
PUP3YER094C PRI2P20457 528 aa7.55□□□□□ -1.2
PUP3YER094C TFC1P32367 649 aa7.55□□□□□ -1.2
PUP3YER094C NGG1P32494 702 aa7.55□□□□□ -1.2
PUP3YER094C PET309P32522 965 aaPredicted RBP7.55□□□□□ -1.2
PUP3YER094C EMC3P36039 253 aa7.55□□□□□ -1.2
PUP3YER094C NTR2P36118 322 aaPredicted RBP7.55□□□□□ -1.2
PUP3YER094C YKR078WP36158 585 aaKnown RBP7.55□□□□□ -1.2
PUP3YER094C MRPL37P36532 105 aa7.55□□□□□ -1.2
PUP3YER094C CBP4P37267 147 aa7.55□□□□□ -1.2
PUP3YER094C YBR071WP38243 211 aa7.55□□□□□ -1.2
PUP3YER094C TDP1P38319 544 aa7.55□□□□□ -1.2
PUP3YER094C SSU1P41930 458 aa7.55□□□□□ -1.2
PUP3YER094C ZIM17P42844 174 aa7.55□□□□□ -1.2
PUP3YER094C DIA3P52290 468 aa7.55□□□□□ -1.2
PUP3YER094C ERG26P53199 349 aaKnown RBP7.55□□□□□ -1.2
PUP3YER094C RPM2Q02773 1202 aa7.55□□□□□ -1.2
PUP3YER094C CTK1Q03957 528 aaKnown RBP7.55□□□□□ -1.2
PUP3YER094C YOR114WQ12219 294 aa7.55□□□□□ -1.2
PUP3YER094C NTO1Q12311 748 aa7.55□□□□□ -1.2
PUP3YER094C RPN6Q12377 434 aa7.55□□□□□ -1.2
PUP3YER094C HRP1Q99383 534 aaKnown RBP7.55□□□□□ -1.2
PUP3YER094C MSS18P08593 268 aa7.54□□□□□ -1.2
PUP3YER094C RPS21AP0C0V8 87 aaKnown RBP7.54□□□□□ -1.2
PUP3YER094C TOP3P13099 656 aa7.54□□□□□ -1.2
PUP3YER094C RDS2P19541 446 aaKnown RBP7.54□□□□□ -1.2
PUP3YER094C RVS161P25343 265 aaKnown RBP7.54□□□□□ -1.2
PUP3YER094C TRX3P25372 127 aa7.54□□□□□ -1.2
PUP3YER094C DPH5P32469 300 aaPredicted RBP7.54□□□□□ -1.2
PUP3YER094C MEI5P32489 222 aa7.54□□□□□ -1.2
PUP3YER094C SEC17P32602 292 aa7.54□□□□□ -1.2
PUP3YER094C PEX6P33760 1030 aa7.54□□□□□ -1.2
PUP3YER094C ROT2P38138 954 aa7.54□□□□□ -1.2
PUP3YER094C RRN10P38204 145 aa7.54□□□□□ -1.2
PUP3YER094C COS111P38308 924 aa7.54□□□□□ -1.2
PUP3YER094C WSC4P38739 605 aa7.54□□□□□ -1.2
PUP3YER094C ATG7P38862 630 aa7.54□□□□□ -1.2
PUP3YER094C GGC1P38988 300 aa7.54□□□□□ -1.2
PUP3YER094C RGI1P40043 161 aaPredicted RBP7.54□□□□□ -1.2
PUP3YER094C APQ12P40532 138 aa7.54□□□□□ -1.2
PUP3YER094C AZF1P41696 914 aa7.54□□□□□ -1.2
PUP3YER094C NOP9P47077 666 aaKnown RBP7.54□□□□□ -1.2
PUP3YER094C GET1P53192 235 aa7.54□□□□□ -1.2
PUP3YER094C YGR016WP53209 190 aa7.54□□□□□ -1.2
PUP3YER094C GPI1P53306 609 aa7.54□□□□□ -1.2
PUP3YER094C SWS2P53937 143 aa7.54□□□□□ -1.2
PUP3YER094C TRM82Q03774 444 aa7.54□□□□□ -1.2
PUP3YER094C RAD33Q04231 177 aa7.54□□□□□ -1.2
PUP3YER094C GMC2Q06201 188 aa7.54□□□□□ -1.2
PUP3YER094C PSR1Q07800 427 aa7.54□□□□□ -1.2
PUP3YER094C NMD4Q12129 218 aa7.54□□□□□ -1.2
PUP3YER094C SNF8Q12483 233 aa7.54□□□□□ -1.2
PUP3YER094C YKL018C-AQ3E7A7 99 aa7.54□□□□□ -1.2
PUP3YER094C LEU4P06208 619 aaKnown RBP7.53□□□□□ -1.2
PUP3YER094C LAT1P12695 482 aaKnown RBP7.53□□□□□ -1.2
PUP3YER094C CMP2P14747 604 aa7.53□□□□□ -1.2
PUP3YER094C TYR1P20049 452 aa7.53□□□□□ -1.2
PUP3YER094C ERG6P25087 383 aaKnown RBP7.53□□□□□ -1.2
PUP3YER094C SPT16P32558 1035 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms