RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	PMT6	P42934	759 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	CTK3	P46963	296 aa	Predicted RBP	4.24	□□□□□ -1.73
UBC8	YEL012W	SAP4	P53036	818 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	TRS23	Q03784	219 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	BNA5	Q05979	453 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	VAM6	Q07468	1049 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	HBT1	Q07653	1046 aa	Known RBP	4.24	□□□□□ -1.73
UBC8	YEL012W	YOR389W	Q08912	624 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	YPL278C	Q08990	100 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	SUC2	P00724	532 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	RPS3	P05750	240 aa	Known RBP	4.23	□□□□□ -1.73
UBC8	YEL012W	SEC1	P30619	724 aa	Known RBP	4.23	□□□□□ -1.73
UBC8	YEL012W	HXT3	P32466	567 aa	Known RBP	4.23	□□□□□ -1.73
UBC8	YEL012W	KAR9	P32526	644 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
UBC8	YEL012W	OAR1	P35731	278 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	ALY1	P36117	915 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	MOH1	P38191	138 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	ARO9	P38840	513 aa	Predicted RBP	4.23	□□□□□ -1.73
UBC8	YEL012W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
UBC8	YEL012W	YJL206C	P39529	758 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	RAD26	P40352	1085 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	FET5	P43561	622 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	GLG2	P47011	380 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	HOP2	P53187	214 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	REG1	Q00816	1014 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	ATG21	Q02887	496 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	GSF2	Q04697	403 aa	Known RBP	4.23	□□□□□ -1.73
UBC8	YEL012W	OPY2	Q06810	360 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	SRO7	Q12038	1033 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	YOL087C	Q99247	1116 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	DDP1	Q99321	188 aa	Known RBP	4.23	□□□□□ -1.73
UBC8	YEL012W	Q0010	Q9ZZX9	128 aa		4.23	□□□□□ -1.73
UBC8	YEL012W	RPL22A	P05749	121 aa	Known RBP	4.22	□□□□□ -1.73
UBC8	YEL012W	PET122	P10355	254 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	RED1	P14291	827 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	PUT4	P15380	627 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	MRPL8	P22353	238 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	NIP100	P33420	868 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	MPE1	P35728	441 aa	Known RBP	4.22	□□□□□ -1.73
UBC8	YEL012W	PXL1	P36166	706 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	KAP104	P38217	918 aa	Known RBP	4.22	□□□□□ -1.73
UBC8	YEL012W	EFM2	P38347	419 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	CFD1	P40558	293 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	SNZ3	P43545	298 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	TIM13	P53299	105 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	GND2	P53319	492 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	SNZ2	P53824	298 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	ESBP6	P53918	673 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	YNL040W	P53960	456 aa	Predicted RBP	4.22	□□□□□ -1.73
UBC8	YEL012W	TMA16	Q08687	178 aa		4.22	□□□□□ -1.73
UBC8	YEL012W	CLC1	P17891	233 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	AMD2	P22580	549 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	EMP70	P32802	667 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	SLC1	P33333	303 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	ELO1	P39540	310 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	PRM9	P39551	298 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	DPH1	P40487	425 aa	Known RBP	4.21	□□□□□ -1.74
UBC8	YEL012W	YIL054W	P40524	105 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	MRX6	P48564	524 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	YGL117W	P53133	265 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	PEX31	P53203	462 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	YPL108W	Q02872	168 aa	Predicted RBP	4.21	□□□□□ -1.74
UBC8	YEL012W	YMR178W	Q03219	274 aa	Known RBP	4.21	□□□□□ -1.74
UBC8	YEL012W	NGL2	Q03264	515 aa	Known RBP	4.21	□□□□□ -1.74
UBC8	YEL012W	INP2	Q03824	705 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	YDR222W	Q04925	415 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	YDR056C	Q12025	205 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	SFI1	Q12369	946 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	OCA6	Q12454	224 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	SKM1	Q12469	655 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	AFI1	Q99222	893 aa		4.21	□□□□□ -1.74
UBC8	YEL012W	AAC1	P04710	309 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	TUB1	P09733	447 aa	Known RBP	4.2	□□□□□ -1.74
UBC8	YEL012W	YPK1	P12688	680 aa	Known RBP	4.2	□□□□□ -1.74
UBC8	YEL012W	PCT1	P13259	424 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	POL30	P15873	258 aa	Known RBP	4.2	□□□□□ -1.74
UBC8	YEL012W	EST1	P17214	699 aa	Predicted RBP	4.2	□□□□□ -1.74
UBC8	YEL012W	PMA2	P19657	947 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	PPH21	P23594	369 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	RBK1	P25332	333 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	GSY2	P27472	705 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	MTH1	P35198	433 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	ADE17	P38009	592 aa	Known RBP	4.2	□□□□□ -1.74
UBC8	YEL012W	SPT8	P38915	602 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	YEL028W	P39989	153 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	YER010C	P40011	234 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	RRT5	P43607	289 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	YML119W	Q03208	357 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	STP3	Q05937	343 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	YPR114W	Q06107	315 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	SWC7	Q06707	132 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	MRH1	Q12117	320 aa	Predicted RBP	4.2	□□□□□ -1.74
UBC8	YEL012W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
UBC8	YEL012W	COX17	Q12287	69 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	YDR061W	Q12298	539 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	YBR255C-A	Q3E776	120 aa		4.2	□□□□□ -1.74
UBC8	YEL012W	TPK2	P06245	380 aa		4.19	□□□□□ -1.74
UBC8	YEL012W	MNE1	P24720	663 aa		4.19	□□□□□ -1.74
UBC8	YEL012W	RER1	P25560	188 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms