RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C RPS2P25443 254 aaKnown RBP3.16□□□□□ -1.9
VAB2YEL005C IDH2P28241 369 aaKnown RBP3.16□□□□□ -1.9
VAB2YEL005C MSN2P33748 704 aa3.16□□□□□ -1.9
VAB2YEL005C SEC66P33754 206 aa3.16□□□□□ -1.9
VAB2YEL005C HCS1P34243 683 aa3.16□□□□□ -1.9
VAB2YEL005C GCS1P35197 352 aa3.16□□□□□ -1.9
VAB2YEL005C BYE1P36106 594 aa3.16□□□□□ -1.9
VAB2YEL005C DUG2P38149 878 aa3.16□□□□□ -1.9
VAB2YEL005C YJL070CP40361 888 aa3.16□□□□□ -1.9
VAB2YEL005C SCD6P45978 349 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9 RIP-Chip
VAB2YEL005C GUF1P46943 645 aa3.16□□□□□ -1.9
VAB2YEL005C RMD9P53140 646 aaKnown RBP3.16□□□□□ -1.9
VAB2YEL005C RPC11Q04307 110 aaPredicted RBP3.16□□□□□ -1.9
VAB2YEL005C MRPL51Q06090 140 aaPredicted RBP3.16□□□□□ -1.9
VAB2YEL005C VPS74Q06385 345 aa3.16□□□□□ -1.9
VAB2YEL005C PHO92Q06390 306 aa3.16□□□□□ -1.9
VAB2YEL005C GRX6Q12438 231 aa3.16□□□□□ -1.9
VAB2YEL005C YRF1-4O13559 1382 aa3.15□□□□□ -1.9
VAB2YEL005C LEU4P06208 619 aaKnown RBP3.15□□□□□ -1.91
VAB2YEL005C PMS1P14242 873 aa3.15□□□□□ -1.91
VAB2YEL005C SPB1P25582 841 aaPredicted RBP3.15□□□□□ -1.91
VAB2YEL005C DBF4P32325 704 aa3.15□□□□□ -1.91
VAB2YEL005C ERG3P32353 365 aa3.15□□□□□ -1.91
VAB2YEL005C NDC1P32500 655 aa3.15□□□□□ -1.91
VAB2YEL005C FRE1P32791 686 aa3.15□□□□□ -1.91
VAB2YEL005C NFU1P32860 256 aa3.15□□□□□ -1.91
VAB2YEL005C SAS3P34218 831 aa3.15□□□□□ -1.91
VAB2YEL005C YER130CP39959 443 aa3.15□□□□□ -1.91
VAB2YEL005C YGR149WP48236 432 aa3.15□□□□□ -1.91
VAB2YEL005C YGL108CP53139 140 aa3.15□□□□□ -1.91
VAB2YEL005C IRC15Q02733 499 aa3.15□□□□□ -1.91
VAB2YEL005C SLD5Q03406 294 aa3.15□□□□□ -1.91
VAB2YEL005C YMR155WQ03795 547 aa3.15□□□□□ -1.91
VAB2YEL005C YDL009CQ12210 107 aa3.15□□□□□ -1.91
VAB2YEL005C YML002WP0CF17 737 aa3.14□□□□□ -1.91
VAB2YEL005C ELO2P25358 347 aa3.14□□□□□ -1.91
VAB2YEL005C NPL6P32832 435 aa3.14□□□□□ -1.91
VAB2YEL005C SIP2P34164 415 aaKnown RBP3.14□□□□□ -1.91
VAB2YEL005C MPE1P35728 441 aaKnown RBP3.14□□□□□ -1.91
VAB2YEL005C VPS52P39904 641 aa3.14□□□□□ -1.91
VAB2YEL005C RBS1Q05672 457 aaKnown RBP3.14□□□□□ -1.91
VAB2YEL005C DAP1Q12091 152 aa3.14□□□□□ -1.91
VAB2YEL005C CFT2Q12102 859 aaPredicted RBP3.14□□□□□ -1.91
VAB2YEL005C CYB2P00175 591 aa3.13□□□□□ -1.91
VAB2YEL005C GLK1P17709 500 aaKnown RBP3.13□□□□□ -1.91
VAB2YEL005C PPH22P23595 377 aa3.13□□□□□ -1.91
VAB2YEL005C GYP6P32806 458 aa3.13□□□□□ -1.91
VAB2YEL005C ARA1P38115 344 aa3.13□□□□□ -1.91
VAB2YEL005C NTC20P38302 140 aaPredicted RBP3.13□□□□□ -1.91
VAB2YEL005C MDM31P38880 579 aa3.13□□□□□ -1.91
VAB2YEL005C DLD2P46681 530 aaKnown RBP3.13□□□□□ -1.91
VAB2YEL005C FMS1P50264 508 aa3.13□□□□□ -1.91
VAB2YEL005C YGL260WP53056 76 aa3.13□□□□□ -1.91
VAB2YEL005C DSL1P53847 754 aa3.13□□□□□ -1.91
VAB2YEL005C NCS2P53923 493 aaPredicted RBP3.13□□□□□ -1.91
VAB2YEL005C RLI1Q03195 608 aaKnown RBP3.13□□□□□ -1.91
VAB2YEL005C SOV1Q04748 898 aa3.13□□□□□ -1.91
VAB2YEL005C SYO1Q07395 620 aa3.13□□□□□ -1.91
VAB2YEL005C SUC2P00724 532 aa3.12□□□□□ -1.91
VAB2YEL005C CDC23P16522 626 aa3.12□□□□□ -1.91
VAB2YEL005C TUL1P36096 758 aa3.12□□□□□ -1.91
VAB2YEL005C YBP1P38315 674 aa3.12□□□□□ -1.91
VAB2YEL005C RTT101P47050 842 aa3.12□□□□□ -1.91
VAB2YEL005C YMR087WQ04299 284 aa3.12□□□□□ -1.91
VAB2YEL005C RRP45Q05636 305 aaKnown RBP3.12□□□□□ -1.91
VAB2YEL005C SET6Q12529 373 aa3.12□□□□□ -1.91
VAB2YEL005C SGV1P23293 657 aaKnown RBP3.11□□□□□ -1.91
VAB2YEL005C FUN19P28003 413 aaPredicted RBP3.11□□□□□ -1.91
VAB2YEL005C HXT3P32466 567 aaKnown RBP3.11□□□□□ -1.91
VAB2YEL005C TFB1P32776 642 aa3.11□□□□□ -1.91
VAB2YEL005C VHC1P38329 1120 aa3.11□□□□□ -1.91
VAB2YEL005C SHO1P40073 367 aa3.11□□□□□ -1.91
VAB2YEL005C SYG1P40528 902 aa3.11□□□□□ -1.91
VAB2YEL005C DRN1P53255 507 aaKnown RBP3.11□□□□□ -1.91
VAB2YEL005C OGG1P53397 376 aaPredicted RBP3.11□□□□□ -1.91
VAB2YEL005C PPT2Q12036 173 aa3.11□□□□□ -1.91
VAB2YEL005C HSP42Q12329 375 aa3.11□□□□□ -1.91
VAB2YEL005C ISA2Q12425 185 aa3.11□□□□□ -1.91
VAB2YEL005C YOL159C-AQ3E769 90 aa3.11□□□□□ -1.91
VAB2YEL005C GPH1P06738 902 aaKnown RBP3.1□□□□□ -1.91
VAB2YEL005C YAR066WP0CX18 203 aa3.1□□□□□ -1.91
VAB2YEL005C YHR214WP0CX19 203 aa3.1□□□□□ -1.91
VAB2YEL005C RPL20AP0CX23 172 aaKnown RBP3.1□□□□□ -1.91
VAB2YEL005C RPL20BP0CX24 172 aaPredicted RBP3.1□□□□□ -1.91
VAB2YEL005C BUD14P27637 709 aa3.1□□□□□ -1.91
VAB2YEL005C SEC1P30619 724 aaKnown RBP3.1□□□□□ -1.91
VAB2YEL005C CRM1P30822 1084 aaKnown RBP3.1□□□□□ -1.91
VAB2YEL005C ATP11P32453 318 aa3.1□□□□□ -1.91
VAB2YEL005C PXA2P34230 853 aa3.1□□□□□ -1.91
VAB2YEL005C FRE2P36033 711 aa3.1□□□□□ -1.91
VAB2YEL005C FMP46P36141 133 aaKnown RBP3.1□□□□□ -1.91
VAB2YEL005C FAU1P40099 211 aa3.1□□□□□ -1.91
VAB2YEL005C ALG8P40351 577 aa3.1□□□□□ -1.91
VAB2YEL005C YGL138CP53122 345 aa3.1□□□□□ -1.91
VAB2YEL005C SLG1P54867 378 aa3.1□□□□□ -1.91
VAB2YEL005C RPA49Q01080 415 aaPredicted RBP3.1□□□□□ -1.91
VAB2YEL005C YMR317WQ04893 1140 aa3.1□□□□□ -1.91
VAB2YEL005C BNA5Q05979 453 aa3.1□□□□□ -1.91
VAB2YEL005C PGA3Q12746 312 aaKnown RBP3.1□□□□□ -1.91
VAB2YEL005C AFI1Q99222 893 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms