RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeast

Gene VPS60, Length 690 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS60	YDR486C	MEI5	P32489	222 aa		10.38	□□□□□ -0.75
VPS60	YDR486C	PET309	P32522	965 aa	Predicted RBP	10.38	□□□□□ -0.75
VPS60	YDR486C	YKR078W	P36158	585 aa	Known RBP	10.38	□□□□□ -0.75
VPS60	YDR486C	AXL2	P38928	823 aa		10.38	□□□□□ -0.75
VPS60	YDR486C	ELO1	P39540	310 aa		10.38	□□□□□ -0.75
VPS60	YDR486C	YAL037W	P39728	267 aa		10.38	□□□□□ -0.75
VPS60	YDR486C	AYR1	P40471	297 aa		10.38	□□□□□ -0.75
VPS60	YDR486C	MAM33	P40513	266 aa		10.38	□□□□□ -0.75
VPS60	YDR486C	AZF1	P41696	914 aa		10.38	□□□□□ -0.75
VPS60	YDR486C	CIS3	P47001	227 aa		10.38	□□□□□ -0.75
VPS60	YDR486C	ERG26	P53199	349 aa	Known RBP	10.38	□□□□□ -0.75
VPS60	YDR486C	IDP3	P53982	420 aa	Known RBP	10.38	□□□□□ -0.75
VPS60	YDR486C	FMP27	Q06179	2628 aa		10.38	□□□□□ -0.75
VPS60	YDR486C	MDM35	O60200	86 aa		10.37	□□□□□ -0.75
VPS60	YDR486C	PRT1	P06103	763 aa	Known RBP	10.37	□□□□□ -0.75
VPS60	YDR486C	REC107	P21651	314 aa		10.37	□□□□□ -0.75
VPS60	YDR486C	CSM1	P25651	190 aa		10.37	□□□□□ -0.75
VPS60	YDR486C	PIM1	P36775	1133 aa		10.37	□□□□□ -0.75
VPS60	YDR486C	MUM2	P38236	366 aa		10.37	□□□□□ -0.75
VPS60	YDR486C	IMA5	P40884	581 aa		10.37	□□□□□ -0.75
VPS60	YDR486C	YNL140C	P53910	189 aa		10.37	□□□□□ -0.75
VPS60	YDR486C	IRC15	Q02733	499 aa		10.37	□□□□□ -0.75
VPS60	YDR486C	HSP31	Q04432	237 aa		10.37	□□□□□ -0.75
VPS60	YDR486C	ATP2	P00830	511 aa	Known RBP	10.36	□□□□□ -0.75
VPS60	YDR486C	ARG81	P05085	880 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	TPK2	P06245	380 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	KAR1	P11927	433 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	KIN2	P13186	1147 aa	Known RBP	10.36	□□□□□ -0.75
VPS60	YDR486C	TRM1	P15565	570 aa	Known RBP	10.36	□□□□□ -0.75
VPS60	YDR486C	AAR2	P32357	355 aa	Predicted RBP	10.36	□□□□□ -0.75
VPS60	YDR486C	ATO2	P32907	282 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	RPT5	P33297	434 aa	Known RBP	10.36	□□□□□ -0.75
VPS60	YDR486C	KKQ8	P36004	724 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	NTR2	P36118	322 aa	Predicted RBP	10.36	□□□□□ -0.75
VPS60	YDR486C	MRPL17	P36528	281 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	CBP4	P37267	147 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	IST2	P38250	946 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	ATG7	P38862	630 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	PLB1	P39105	664 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	JEM1	P40358	645 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	AIM22	P47051	409 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	HXT16	P47185	567 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	DIA3	P52290	468 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	HXT15	P54854	567 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	EFR3	Q03653	782 aa	Known RBP	10.36	□□□□□ -0.75
VPS60	YDR486C	MFB1	Q04922	465 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	YHC1	Q05900	231 aa	Known RBP	10.36	□□□□□ -0.75
VPS60	YDR486C	ATG26	Q06321	1198 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	GGA1	Q06336	557 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	THI73	Q07904	523 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	GPN2	Q08726	347 aa	Predicted RBP	10.36	□□□□□ -0.75
VPS60	YDR486C	STT4	P37297	1900 aa		10.36	□□□□□ -0.75
VPS60	YDR486C	RAS2	P01120	322 aa	Known RBP	10.35	□□□□□ -0.75
VPS60	YDR486C	MRP13	P12686	339 aa		10.35	□□□□□ -0.75
VPS60	YDR486C	HES1	P35843	434 aa		10.35	□□□□□ -0.75
VPS60	YDR486C	RGA1	P39083	1007 aa		10.35	□□□□□ -0.75
VPS60	YDR486C	APQ12	P40532	138 aa		10.35	□□□□□ -0.75
VPS60	YDR486C	FMP32	P43557	207 aa		10.35	□□□□□ -0.75
VPS60	YDR486C	SUN4	P53616	420 aa		10.35	□□□□□ -0.75
VPS60	YDR486C	YNR021W	P53723	404 aa	Known RBP	10.35	□□□□□ -0.75
VPS60	YDR486C	ASA1	Q06822	443 aa		10.35	□□□□□ -0.75
VPS60	YDR486C	NMD4	Q12129	218 aa		10.35	□□□□□ -0.75
VPS60	YDR486C	YLR111W	Q12528	110 aa		10.35	□□□□□ -0.75
VPS60	YDR486C	TOR2	P32600	2474 aa	Known RBP	10.35	□□□□□ -0.75
VPS60	YDR486C	ERG6	P25087	383 aa	Known RBP	10.34	□□□□□ -0.75
VPS60	YDR486C	ROT2	P38138	954 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	RRN10	P38204	145 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	COS111	P38308	924 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	MET30	P39014	640 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	CEM1	P39525	442 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	YPS6	P40583	537 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	SEC26	P41810	973 aa	Known RBP	10.34	□□□□□ -0.75
VPS60	YDR486C	RHO3	Q00245	231 aa	Known RBP	10.34	□□□□□ -0.75
VPS60	YDR486C	MMT1	Q03218	510 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	YMR010W	Q03687	405 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	YOR114W	Q12219	294 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	YLL054C	Q12244	843 aa		10.34	□□□□□ -0.75
VPS60	YDR486C	RPL24A	P04449	155 aa	Known RBP	10.33	□□□□□ -0.76
VPS60	YDR486C	ARG3	P05150	338 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	LAT1	P12695	482 aa	Known RBP	10.33	□□□□□ -0.76
VPS60	YDR486C	CMP2	P14747	604 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	MSS116	P15424	664 aa	Known RBP	10.33	□□□□□ -0.76
VPS60	YDR486C	PRI2	P20457	528 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	ATP7	P30902	174 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	SPT16	P32558	1035 aa	Known RBP	10.33	□□□□□ -0.76
VPS60	YDR486C	SFC1	P33303	322 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	ARA1	P38115	344 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	SUM1	P46676	1062 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	MTQ2	Q03920	221 aa	Predicted RBP	10.33	□□□□□ -0.76
VPS60	YDR486C	YML096W	Q04489	525 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	ROY1	Q04847	553 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	PSR1	Q07800	427 aa		10.33	□□□□□ -0.76
VPS60	YDR486C	RPN5	Q12250	445 aa	Known RBP	10.33	□□□□□ -0.76
VPS60	YDR486C	FUR1	P18562	216 aa	Known RBP	10.32	□□□□□ -0.76
VPS60	YDR486C	TYR1	P20049	452 aa		10.32	□□□□□ -0.76
VPS60	YDR486C	DOM34	P33309	386 aa		10.32	□□□□□ -0.76
VPS60	YDR486C	VPS21	P36017	210 aa	Known RBP	10.32	□□□□□ -0.76
VPS60	YDR486C	YHR033W	P38690	423 aa		10.32	□□□□□ -0.76
VPS60	YDR486C	LYS1	P38998	373 aa	RIP-Chip data	10.32	□□□□□ -0.76	RIP-Chip
VPS60	YDR486C	ECM1	P39715	212 aa		10.32	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms