RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W PPM1Q04081 328 aa2.36□□□□□ -2.03
SDC1YDR469W YDR109CQ04585 715 aa2.36□□□□□ -2.03
SDC1YDR469W SOV1Q04748 898 aa2.36□□□□□ -2.03
SDC1YDR469W RBS1Q05672 457 aaKnown RBP2.36□□□□□ -2.03
SDC1YDR469W DBP9Q06218 594 aaKnown RBP2.36□□□□□ -2.03
SDC1YDR469W NOP6Q07623 225 aaKnown RBP2.36□□□□□ -2.03
SDC1YDR469W TLG2Q08144 397 aa2.36□□□□□ -2.03
SDC1YDR469W SIL1Q08199 421 aa2.36□□□□□ -2.03
SDC1YDR469W FMP40Q08968 688 aaPredicted RBP2.36□□□□□ -2.03
SDC1YDR469W PFK27Q12471 397 aaPredicted RBP2.36□□□□□ -2.03
SDC1YDR469W YBR298C-AQ8TGK4 73 aa2.36□□□□□ -2.03
SDC1YDR469W MF(ALPHA)1P01149 165 aa2.35□□□□□ -2.03
SDC1YDR469W RPL6BP05739 176 aaKnown RBP2.35□□□□□ -2.03
SDC1YDR469W OM45P16547 393 aa2.35□□□□□ -2.03
SDC1YDR469W DAP2P18962 818 aa2.35□□□□□ -2.03
SDC1YDR469W KGD1P20967 1014 aaKnown RBP2.35□□□□□ -2.03
SDC1YDR469W PTC6P25646 442 aa2.35□□□□□ -2.03
SDC1YDR469W BUD14P27637 709 aa2.35□□□□□ -2.03
SDC1YDR469W PDB1P32473 366 aaKnown RBP2.35□□□□□ -2.03
SDC1YDR469W NIP1P32497 812 aaKnown RBP2.35□□□□□ -2.03
SDC1YDR469W RML2P32611 393 aa2.35□□□□□ -2.03
SDC1YDR469W TUL1P36096 758 aa2.35□□□□□ -2.03
SDC1YDR469W PCH2P38126 564 aa2.35□□□□□ -2.03
SDC1YDR469W PFF1P38244 976 aa2.35□□□□□ -2.03
SDC1YDR469W SEC31P38968 1273 aaKnown RBP2.35□□□□□ -2.03
SDC1YDR469W SER3P40054 469 aa2.35□□□□□ -2.03
SDC1YDR469W SWP82P43554 623 aa2.35□□□□□ -2.03
SDC1YDR469W EPL1P43572 832 aa2.35□□□□□ -2.03
SDC1YDR469W YGL138CP53122 345 aa2.35□□□□□ -2.03
SDC1YDR469W RRP46P53256 223 aaPredicted RBP2.35□□□□□ -2.03
SDC1YDR469W CAF130P53280 1122 aaPredicted RBP2.35□□□□□ -2.03
SDC1YDR469W PDR16P53860 351 aaKnown RBP2.35□□□□□ -2.03
SDC1YDR469W AQR1P53943 586 aa2.35□□□□□ -2.03
SDC1YDR469W ERV25P54837 211 aaKnown RBP2.35□□□□□ -2.03
SDC1YDR469W RPL6AQ02326 176 aaKnown RBP2.35□□□□□ -2.03
SDC1YDR469W VTA1Q06263 330 aa2.35□□□□□ -2.03
SDC1YDR469W ATG23Q06671 453 aa2.35□□□□□ -2.03
SDC1YDR469W POS5Q06892 414 aa2.35□□□□□ -2.03
SDC1YDR469W THI3Q07471 609 aa2.35□□□□□ -2.03
SDC1YDR469W RTC5Q12108 567 aaKnown RBP2.35□□□□□ -2.03
SDC1YDR469W YLR278CQ05854 1341 aa2.35□□□□□ -2.03
SDC1YDR469W HIP1P06775 603 aa2.34□□□□□ -2.03
SDC1YDR469W GAL7P08431 366 aa2.34□□□□□ -2.03
SDC1YDR469W PUT4P15380 627 aa2.34□□□□□ -2.03
SDC1YDR469W URA4P20051 364 aa2.34□□□□□ -2.03
SDC1YDR469W LSB5P25369 354 aa2.34□□□□□ -2.03
SDC1YDR469W IME2P32581 645 aa2.34□□□□□ -2.03
SDC1YDR469W SRB2P34162 210 aa2.34□□□□□ -2.03
SDC1YDR469W YBL055CP34220 418 aaPredicted RBP2.34□□□□□ -2.03
SDC1YDR469W NTR2P36118 322 aaPredicted RBP2.34□□□□□ -2.03
SDC1YDR469W FAD1P38913 306 aa2.34□□□□□ -2.03
SDC1YDR469W YTA12P40341 825 aa2.34□□□□□ -2.03
SDC1YDR469W CHS6P40955 746 aa2.34□□□□□ -2.03
SDC1YDR469W CDC1P40986 491 aa2.34□□□□□ -2.03
SDC1YDR469W VMA13P41807 478 aaKnown RBP2.34□□□□□ -2.03
SDC1YDR469W AIP1P46680 615 aaKnown RBP2.34□□□□□ -2.03
SDC1YDR469W NPA3P47122 385 aa2.34□□□□□ -2.03
SDC1YDR469W YGR149WP48236 432 aa2.34□□□□□ -2.03
SDC1YDR469W YPR003CP53394 754 aa2.34□□□□□ -2.03
SDC1YDR469W ADE16P54113 591 aaKnown RBP2.34□□□□□ -2.03
SDC1YDR469W PRO2P54885 456 aaKnown RBP2.34□□□□□ -2.03
SDC1YDR469W TOF2Q02208 771 aa2.34□□□□□ -2.03
SDC1YDR469W PDS5Q04264 1277 aa2.34□□□□□ -2.03
SDC1YDR469W RNH1Q04740 348 aa2.34□□□□□ -2.03
SDC1YDR469W UAF30Q08747 228 aa2.34□□□□□ -2.03
SDC1YDR469W FRE3Q08905 711 aa2.34□□□□□ -2.03
SDC1YDR469W YPL272CQ08984 517 aa2.34□□□□□ -2.03
SDC1YDR469W LEU9Q12166 604 aaKnown RBP2.34□□□□□ -2.03
SDC1YDR469W YBR255C-AQ3E776 120 aa2.34□□□□□ -2.03
SDC1YDR469W HXK2P04807 486 aaKnown RBP2.33□□□□□ -2.04
SDC1YDR469W PDE2P06776 526 aa2.33□□□□□ -2.04
SDC1YDR469W CLC1P17891 233 aa2.33□□□□□ -2.04
SDC1YDR469W PRP2P20095 876 aaPredicted RBP2.33□□□□□ -2.04
SDC1YDR469W YSP3P25036 478 aa2.33□□□□□ -2.04
SDC1YDR469W IMG1P25626 169 aa2.33□□□□□ -2.04
SDC1YDR469W PHO91P27514 894 aa2.33□□□□□ -2.04
SDC1YDR469W PRO3P32263 286 aaKnown RBP2.33□□□□□ -2.04
SDC1YDR469W SSE2P32590 693 aaKnown RBP2.33□□□□□ -2.04
SDC1YDR469W MRE11P32829 692 aa2.33□□□□□ -2.04
SDC1YDR469W NIP100P33420 868 aa2.33□□□□□ -2.04
SDC1YDR469W YBR144CP34215 104 aa2.33□□□□□ -2.04
SDC1YDR469W OCT1P35999 772 aa2.33□□□□□ -2.04
SDC1YDR469W AVT5P38176 459 aa2.33□□□□□ -2.04
SDC1YDR469W NTC20P38302 140 aaPredicted RBP2.33□□□□□ -2.04
SDC1YDR469W YHR131CP38835 850 aa2.33□□□□□ -2.04
SDC1YDR469W VPS45P38932 577 aa2.33□□□□□ -2.04
SDC1YDR469W MKT1P40850 830 aaKnown RBP2.33□□□□□ -2.04
SDC1YDR469W SEC27P41811 889 aaKnown RBP2.33□□□□□ -2.04
SDC1YDR469W PTR3P43606 678 aa2.33□□□□□ -2.04
SDC1YDR469W ALK1P43633 760 aaKnown RBP2.33□□□□□ -2.04
SDC1YDR469W YJL132WP47014 750 aa2.33□□□□□ -2.04
SDC1YDR469W SMC3P47037 1230 aa2.33□□□□□ -2.04
SDC1YDR469W MLC1P53141 149 aa2.33□□□□□ -2.04
SDC1YDR469W EAF7P53911 425 aaKnown RBP2.33□□□□□ -2.04
SDC1YDR469W INA17Q02888 182 aa2.33□□□□□ -2.04
SDC1YDR469W ACL4Q03771 387 aa2.33□□□□□ -2.04
SDC1YDR469W CAC2Q04199 468 aa2.33□□□□□ -2.04
SDC1YDR469W YMR130WQ04223 302 aa2.33□□□□□ -2.04
SDC1YDR469W RRP45Q05636 305 aaKnown RBP2.33□□□□□ -2.04
SDC1YDR469W ECI1Q05871 280 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms