RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	ALG14	P38242	237 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	RBG1	P39729	369 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	GIP4	P39732	760 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	TPA1	P40032	644 aa	Known RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	GIP2	P40036	548 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	TIR3	P40552	269 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	DOT5	P40553	215 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	FET4	P40988	552 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	ERR3	P42222	437 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	GSM1	P42950	618 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	COS4	P43542	379 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	BUD13	P46947	266 aa	Predicted RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	APS3	P47064	194 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	AVT1	P47082	602 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	RPS12	P48589	143 aa	Known RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	YPT32	P51996	222 aa	Known RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	DIA3	P52290	468 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	ALT1	P52893	592 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	MAL11	P53048	616 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	MRH4	P53166	561 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	FMP48	P53233	369 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	GPD1	Q00055	391 aa	Known RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	MAK3	Q03503	176 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	NSE5	Q03718	556 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	ENT5	Q03769	411 aa	Known RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	BCH1	Q05029	724 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	CDC123	Q05791	360 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	DBP9	Q06218	594 aa	Known RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	DIB1	Q06819	143 aa	Predicted RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	PEX27	Q08580	376 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	FEX2	Q08991	375 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	TY1A-GR1	Q12085	440 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	RBD2	Q12270	262 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	RPN6	Q12377	434 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	PFK27	Q12471	397 aa	Predicted RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	YPL119C-A	Q3E751	87 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	MHF1	Q3E835	90 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	YHR213W-A	Q8TGT4	77 aa		4.89	□□□□□ -1.63
PAL1	YDR348C	TY1A-OL	Q92392	440 aa	Known RBP	4.89	□□□□□ -1.63
PAL1	YDR348C	THP2	O13539	261 aa	Known RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
PAL1	YDR348C	ARG3	P05150	338 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	STE3	P06783	470 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	HTS1	P07263	546 aa	Known RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	YGL041W-A	P0C5N3	154 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	DSF1	P0CX08	502 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	YNR073C	P0CX09	502 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	PUP3	P25451	205 aa	Known RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	RIM1	P32445	135 aa	Known RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	ATG19	P35193	415 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	FMP23	P38231	175 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	YHR131C	P38835	850 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	MLH1	P38920	769 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	EXO1	P39875	702 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	RPT2	P40327	437 aa	Known RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	NEO1	P40527	1151 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	MRPS18	P42847	217 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	BST1	P43571	1029 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	YFR018C	P43599	363 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	ZAP1	P47043	880 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	NAS6	P50086	228 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	RRT6	P53117	311 aa	Predicted RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	YPR003C	P53394	754 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	FYV6	P53913	173 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	LSM3	P57743	89 aa	Known RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	NUP49	Q02199	472 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	RPL6A	Q02326	176 aa	Known RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	SCS7	Q03529	384 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	YDR249C	Q03787	373 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	PPN1	Q04119	674 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	ECM38	Q05902	660 aa	Predicted RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	NBA1	Q08229	501 aa	Known RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	YOR289W	Q12012	251 aa	Predicted RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	SLF1	Q12034	447 aa	Known RBP	4.88	□□□□□ -1.63
PAL1	YDR348C	REC8	Q12188	680 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	ATG34	Q12292	412 aa		4.88	□□□□□ -1.63
PAL1	YDR348C	TIM9	O74700	87 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	COX11	P19516	300 aa	Known RBP	4.87	□□□□□ -1.63
PAL1	YDR348C	ATP12	P22135	325 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	OCA4	P25366	362 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	YCL068C	P25593	260 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	PHO91	P27514	894 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	FUN30	P31380	1131 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	RNP1	P32385	249 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	UTR4	P32626	227 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	BEM3	P32873	1128 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	MRP4	P32902	394 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	ZRT3	P34240	503 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	YKL100C	P34248	587 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	MRPL17	P36528	281 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	CST26	P38226	397 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	KEL1	P38853	1164 aa	Known RBP	4.87	□□□□□ -1.63
PAL1	YDR348C	DUN1	P39009	513 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	ESL1	P40456	1118 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	LSB3	P43603	459 aa	Known RBP	4.87	□□□□□ -1.63
PAL1	YDR348C	CNN1	P43618	361 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	YJR154W	P47181	346 aa		4.87	□□□□□ -1.63
PAL1	YDR348C	YGL039W	P53183	348 aa	Known RBP	4.87	□□□□□ -1.63
PAL1	YDR348C	YGR053C	P53234	283 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms