RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W YIL067CP40514 678 aa1.66□□□□□ -2.14
CFT1YDR301W DUG1P43616 481 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W TIS11P47977 285 aa1.66□□□□□ -2.14
CFT1YDR301W GPI8P49018 411 aa1.66□□□□□ -2.14
CFT1YDR301W MRM2P53123 320 aa1.66□□□□□ -2.14
CFT1YDR301W TIM13P53299 105 aa1.66□□□□□ -2.14
CFT1YDR301W FRE4P53746 719 aa1.66□□□□□ -2.14
CFT1YDR301W SWS2P53937 143 aa1.66□□□□□ -2.14
CFT1YDR301W LSM3P57743 89 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W SSL1Q04673 461 aaPredicted RBP1.66□□□□□ -2.14
CFT1YDR301W GTB1Q04924 702 aa1.66□□□□□ -2.14
CFT1YDR301W ATG38Q05789 226 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W YEH2Q07950 538 aa1.66□□□□□ -2.14
CFT1YDR301W IRC13Q08630 104 aa1.66□□□□□ -2.14
CFT1YDR301W ATG29Q12092 213 aa1.66□□□□□ -2.14
CFT1YDR301W YOL107WQ12239 342 aa1.66□□□□□ -2.14
CFT1YDR301W TAF3Q12297 353 aa1.66□□□□□ -2.14
CFT1YDR301W YDR061WQ12298 539 aa1.66□□□□□ -2.14
CFT1YDR301W PST1Q12355 444 aa1.66□□□□□ -2.14
CFT1YDR301W JLP1Q12358 412 aa1.66□□□□□ -2.14
CFT1YDR301W YKL018C-AQ3E7A7 99 aa1.66□□□□□ -2.14
CFT1YDR301W ERG20P08524 352 aaKnown RBP1.65□□□□□ -2.14
CFT1YDR301W BEM1P29366 551 aa1.65□□□□□ -2.14
CFT1YDR301W NTH1P32356 751 aa1.65□□□□□ -2.14
CFT1YDR301W TFC1P32367 649 aa1.65□□□□□ -2.14
CFT1YDR301W SPR1P32603 445 aa1.65□□□□□ -2.14
CFT1YDR301W STE5P32917 917 aa1.65□□□□□ -2.14
CFT1YDR301W PRP18P33411 251 aaPredicted RBP1.65□□□□□ -2.14
CFT1YDR301W PEX6P33760 1030 aa1.65□□□□□ -2.14
CFT1YDR301W LST4P34239 828 aa1.65□□□□□ -2.14
CFT1YDR301W EMC3P36039 253 aa1.65□□□□□ -2.14
CFT1YDR301W SRX1P36077 127 aa1.65□□□□□ -2.14
CFT1YDR301W AHP1P38013 176 aaKnown RBP1.65□□□□□ -2.14
CFT1YDR301W NUP85P46673 744 aa1.65□□□□□ -2.14
CFT1YDR301W TY4A-JP47023 414 aa1.65□□□□□ -2.14
CFT1YDR301W BIT61P47041 543 aa1.65□□□□□ -2.14
CFT1YDR301W MPS3P47069 682 aa1.65□□□□□ -2.14
CFT1YDR301W SUT1P53032 299 aaKnown RBP1.65□□□□□ -2.14
CFT1YDR301W CUS2P53830 285 aaPredicted RBP1.65□□□□□ -2.14
CFT1YDR301W ELP4Q02884 456 aaKnown RBP1.65□□□□□ -2.14
CFT1YDR301W RNY1Q02933 434 aaKnown RBP1.65□□□□□ -2.14
CFT1YDR301W HFD1Q04458 532 aa1.65□□□□□ -2.14
CFT1YDR301W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.65□□□□□ -2.14not detected
CFT1YDR301W GYP1Q08484 637 aa1.65□□□□□ -2.14
CFT1YDR301W MHT1Q12525 324 aa1.65□□□□□ -2.14
CFT1YDR301W CBP2P03874 630 aaPredicted RBP1.65□□□□□ -2.15
CFT1YDR301W SEC14P24280 304 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W BUB2P26448 306 aaPredicted RBP1.65□□□□□ -2.15
CFT1YDR301W BUB3P26449 341 aa1.65□□□□□ -2.15
CFT1YDR301W MVD1P32377 396 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W PDB1P32473 366 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W SRB5P32585 307 aa1.65□□□□□ -2.15
CFT1YDR301W COX13P32799 129 aa1.65□□□□□ -2.15
CFT1YDR301W SPO23P33757 523 aa1.65□□□□□ -2.15
CFT1YDR301W RRN3P36070 627 aa1.65□□□□□ -2.15
CFT1YDR301W ROT2P38138 954 aa1.65□□□□□ -2.15
CFT1YDR301W MUM2P38236 366 aa1.65□□□□□ -2.15
CFT1YDR301W IST2P38250 946 aa1.65□□□□□ -2.15
CFT1YDR301W BMT2P38278 337 aa1.65□□□□□ -2.15
CFT1YDR301W YDR089WP38966 869 aa1.65□□□□□ -2.15
CFT1YDR301W IMA5P40884 581 aa1.65□□□□□ -2.15
CFT1YDR301W GAB1P41733 394 aa1.65□□□□□ -2.15
CFT1YDR301W FET5P43561 622 aa1.65□□□□□ -2.15
CFT1YDR301W AIF1P52923 378 aa1.65□□□□□ -2.15
CFT1YDR301W EFM5P53200 248 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W GOR1P53839 350 aa1.65□□□□□ -2.15
CFT1YDR301W AQR1P53943 586 aa1.65□□□□□ -2.15
CFT1YDR301W UBP2Q01476 1272 aa1.65□□□□□ -2.15
CFT1YDR301W LGE1Q02796 332 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W RPC11Q04307 110 aaPredicted RBP1.65□□□□□ -2.15
CFT1YDR301W GET4Q12125 312 aa1.65□□□□□ -2.15
CFT1YDR301W UBX3Q12229 455 aa1.65□□□□□ -2.15
CFT1YDR301W RPS17AP02407 136 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W RPS17BP14127 136 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W NSP1P14907 823 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W RNQ1P25367 405 aa1.65□□□□□ -2.15
CFT1YDR301W TOA1P32773 286 aa1.65□□□□□ -2.15
CFT1YDR301W BCK2P33306 851 aa1.65□□□□□ -2.15
CFT1YDR301W MTC2P34246 357 aa1.65□□□□□ -2.15
CFT1YDR301W UTH1P36135 365 aa1.65□□□□□ -2.15
CFT1YDR301W YKR078WP36158 585 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W YCR087C-AP37263 153 aa1.65□□□□□ -2.15
CFT1YDR301W RIM11P38615 370 aa1.65□□□□□ -2.15
CFT1YDR301W YHR033WP38690 423 aa1.65□□□□□ -2.15
CFT1YDR301W MED6P38782 295 aa1.65□□□□□ -2.15
CFT1YDR301W RGA1P39083 1007 aa1.65□□□□□ -2.15
CFT1YDR301W AIM22P47051 409 aa1.65□□□□□ -2.15
CFT1YDR301W EMC4P53073 190 aa1.65□□□□□ -2.15
CFT1YDR301W ARC35P53731 342 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W ECM9Q02202 377 aa1.65□□□□□ -2.15
CFT1YDR301W EGD1Q02642 157 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W SRP1Q02821 542 aaKnown RBP1.65□□□□□ -2.15
CFT1YDR301W EMI1Q04406 187 aa1.65□□□□□ -2.15
CFT1YDR301W MFB1Q04922 465 aa1.65□□□□□ -2.15
CFT1YDR301W YLR030WQ07967 263 aa1.65□□□□□ -2.15
CFT1YDR301W UPC2Q12151 913 aa1.65□□□□□ -2.15
CFT1YDR301W TY1A-DR4O74302 440 aa1.64□□□□□ -2.15
CFT1YDR301W TY1A-HP0C2I4 478 aaKnown RBP1.64□□□□□ -2.15
CFT1YDR301W TY1A-AP0CX57 440 aa1.64□□□□□ -2.15
CFT1YDR301W TY1A-PR1P0CX58 440 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 136.1 ms