RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	FSH1	P38777	243 aa	Known RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	PPE1	P38796	400 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	KEL1	P38853	1164 aa	Known RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	YHR218W	P38899	603 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	MTW1	P39731	289 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	SOK1	P40317	901 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	PFD1	P46988	109 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	SRB7	P47822	140 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	FOL2	P51601	243 aa	Known RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	CLD1	P53264	445 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	YNL018C	P53976	612 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	YPL107W	Q02873	248 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	SNU56	Q03782	492 aa	Known RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	SEG1	Q04279	960 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	ENT2	Q05785	613 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	IRC3	Q06683	689 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	YPR022C	Q12139	1133 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	YGK3	Q12222	375 aa	Predicted RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	RPN6	Q12377	434 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	RPL4A	P10664	362 aa	Known RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	KIN3	P22209	435 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	CHA1	P25379	360 aa	Known RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	SGF29	P25554	259 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	SHP1	P34223	423 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	ZRT3	P34240	503 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	MRPL17	P36528	281 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	YBL028C	P38202	106 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	SAP30	P38429	201 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	YHR182W	P38870	785 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	IPT1	P38954	527 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	YER034W	P40022	185 aa	Known RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	YER186C	P40101	306 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	FIS1	P40515	155 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	ALR2	P43553	858 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	RPL4B	P49626	362 aa	Known RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	PUS2	P53167	370 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	YGR026W	P53217	278 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	PEX13	P80667	386 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	PRP38	Q00723	242 aa	Predicted RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	RMI1	Q02685	241 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	YEH1	Q07804	573 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	FEX1	Q08913	375 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	FEX2	Q08991	375 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	SNU23	Q12368	194 aa	Predicted RBP	4.2	□□□□□ -1.74
UPC2	YDR213W	NSI1	Q12457	570 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	MHF1	Q3E835	90 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	MOT1	P32333	1867 aa		4.2	□□□□□ -1.74
UPC2	YDR213W	UBR2	Q07963	1872 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	SAM1	P10659	382 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
UPC2	YDR213W	CSM1	P25651	190 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	CDC5	P32562	705 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	SRP68	P38687	599 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	YEL025C	P39991	1188 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	FMP52	P40008	231 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	YFR018C	P43599	363 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	ASN1	P49089	572 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	MND1	P53102	219 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	MPS1	P54199	764 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	SLD5	Q03406	294 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	CDC123	Q05791	360 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	YHC1	Q05900	231 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	ARR2	Q06597	130 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	SHS1	Q07657	551 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	TPO1	Q07824	586 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	SLD7	Q08457	257 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	PCL8	Q08966	492 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	WTM2	Q12206	467 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	FLP1	P03870	423 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	AAC1	P04710	309 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	RPS3	P05750	240 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	SGV1	P23293	657 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	KIN82	P25341	720 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	HCM1	P25364	564 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	BUB2	P26448	306 aa	Predicted RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	BEM1	P29366	551 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	SPT14	P32363	452 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	YKU70	P32807	602 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	ATP3	P38077	311 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	XDJ1	P39102	459 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	RSP5	P39940	809 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	MNN5	P46982	586 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	PPT1	P53043	513 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	MRH4	P53166	561 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	SLI1	P53304	468 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	MTD1	Q02046	320 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	RRP17	Q04031	235 aa	Predicted RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	BNA7	Q04066	261 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	YLR257W	Q06146	321 aa	Known RBP	4.19	□□□□□ -1.74
UPC2	YDR213W	ENV7	Q12003	364 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	YOR022C	Q12204	715 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	YPR1	Q12458	312 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	YDR461C-A	Q2V2P7	80 aa		4.19	□□□□□ -1.74
UPC2	YDR213W	TUB2	P02557	457 aa	Known RBP	4.18	□□□□□ -1.74
UPC2	YDR213W	MRP2	P10663	115 aa	Predicted RBP	4.18	□□□□□ -1.74
UPC2	YDR213W	PUP3	P25451	205 aa	Known RBP	4.18	□□□□□ -1.74
UPC2	YDR213W	MLF3	P32047	452 aa		4.18	□□□□□ -1.74
UPC2	YDR213W	TEF4	P36008	412 aa	Known RBP	4.18	□□□□□ -1.74
UPC2	YDR213W	VPS51	P36116	164 aa		4.18	□□□□□ -1.74
UPC2	YDR213W	RRP4	P38792	359 aa	Known RBP	4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms