RNA–Protein interactions for RNA: YDR169C

STB3, Transcript of Ribosomal RNA processing element (RRPE)-binding protein, yeast

Gene STB3, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STB3	YDR169C	LSM5	P40089	93 aa	Known RBP	4.58	□□□□□ -1.68
STB3	YDR169C	GUF1	P46943	645 aa		4.58	□□□□□ -1.68
STB3	YDR169C	SMC3	P47037	1230 aa		4.58	□□□□□ -1.68
STB3	YDR169C	NPA3	P47122	385 aa		4.58	□□□□□ -1.68
STB3	YDR169C	YOR387C	Q08910	206 aa		4.58	□□□□□ -1.68
STB3	YDR169C	RDL1	Q12305	139 aa	Known RBP	4.58	□□□□□ -1.68
STB3	YDR169C	FRE7	Q12333	620 aa		4.58	□□□□□ -1.68
STB3	YDR169C	PDX1	P16451	410 aa		4.57	□□□□□ -1.68
STB3	YDR169C	ERG3	P32353	365 aa		4.57	□□□□□ -1.68
STB3	YDR169C	SIP1	P32578	815 aa		4.57	□□□□□ -1.68
STB3	YDR169C	FHL1	P39521	936 aa		4.57	□□□□□ -1.68
STB3	YDR169C	CIR1	P42940	261 aa		4.57	□□□□□ -1.68
STB3	YDR169C	TOS3	P43637	560 aa		4.57	□□□□□ -1.68
STB3	YDR169C	DUO1	P53168	247 aa	Known RBP	4.57	□□□□□ -1.68
STB3	YDR169C	ATP23	P53722	227 aa		4.57	□□□□□ -1.68
STB3	YDR169C	BSC5	P53755	489 aa		4.57	□□□□□ -1.68
STB3	YDR169C	HEL2	Q05580	639 aa	Known RBP	4.57	□□□□□ -1.68
STB3	YDR169C	RAD34	Q06665	692 aa		4.57	□□□□□ -1.68
STB3	YDR169C	PRS5	Q12265	496 aa	Known RBP	4.57	□□□□□ -1.68
STB3	YDR169C	COX17	Q12287	69 aa		4.57	□□□□□ -1.68
STB3	YDR169C	GIS3	Q12418	502 aa		4.57	□□□□□ -1.68
STB3	YDR169C	YLR111W	Q12528	110 aa		4.57	□□□□□ -1.68
STB3	YDR169C	COX1	P00401	534 aa		4.56	□□□□□ -1.68
STB3	YDR169C	CDC42	P19073	191 aa		4.56	□□□□□ -1.68
STB3	YDR169C	FPR1	P20081	114 aa	Known RBP	4.56	□□□□□ -1.68
STB3	YDR169C	BMH1	P29311	267 aa	Known RBP	4.56	□□□□□ -1.68
STB3	YDR169C	DBF4	P32325	704 aa		4.56	□□□□□ -1.68
STB3	YDR169C	EFB1	P32471	206 aa	Known RBP	4.56	□□□□□ -1.68
STB3	YDR169C	KDX1	P36005	433 aa		4.56	□□□□□ -1.68
STB3	YDR169C	RPF2	P36160	344 aa	Known RBP	4.56	□□□□□ -1.68
STB3	YDR169C	PCF11	P39081	626 aa	Predicted RBP	4.56	□□□□□ -1.68
STB3	YDR169C	DSE1	P40077	573 aa		4.56	□□□□□ -1.68
STB3	YDR169C	YJR061W	P40355	935 aa		4.56	□□□□□ -1.68
STB3	YDR169C	SHQ1	P40486	507 aa	Predicted RBP	4.56	□□□□□ -1.68
STB3	YDR169C	YJR054W	P47114	497 aa		4.56	□□□□□ -1.68
STB3	YDR169C	BTN2	P53286	410 aa		4.56	□□□□□ -1.68
STB3	YDR169C	AAT1	Q01802	451 aa		4.56	□□□□□ -1.68
STB3	YDR169C	MZM1	Q03429	123 aa	Predicted RBP	4.56	□□□□□ -1.68
STB3	YDR169C	RIM13	Q03792	727 aa		4.56	□□□□□ -1.68
STB3	YDR169C	YDR286C	Q05530	114 aa		4.56	□□□□□ -1.68
STB3	YDR169C	TLG2	Q08144	397 aa		4.56	□□□□□ -1.68
STB3	YDR169C	DDC1	Q08949	612 aa		4.56	□□□□□ -1.68
STB3	YDR169C	NBP2	Q12163	236 aa		4.56	□□□□□ -1.68
STB3	YDR169C	GCN1	P33892	2672 aa	Known RBP	4.56	□□□□□ -1.68
STB3	YDR169C	KES1	P35844	434 aa	Known RBP	4.56	□□□□□ -1.68
STB3	YDR169C	APD1	P38281	316 aa		4.56	□□□□□ -1.68
STB3	YDR169C	CDC1	P40986	491 aa		4.56	□□□□□ -1.68
STB3	YDR169C	SIP4	P46954	829 aa		4.56	□□□□□ -1.68
STB3	YDR169C	VEL1	P53058	206 aa		4.56	□□□□□ -1.68
STB3	YDR169C	TOF2	Q02208	771 aa		4.56	□□□□□ -1.68
STB3	YDR169C	SMA1	Q02651	245 aa		4.56	□□□□□ -1.68
STB3	YDR169C	VAM6	Q07468	1049 aa		4.56	□□□□□ -1.68
STB3	YDR169C	YOL075C	Q08234	1294 aa		4.56	□□□□□ -1.68
STB3	YDR169C	SKM1	Q12469	655 aa		4.56	□□□□□ -1.68
STB3	YDR169C	MSF1	P08425	469 aa		4.55	□□□□□ -1.68
STB3	YDR169C	SUI3	P09064	285 aa	Known RBP	4.55	□□□□□ -1.68
STB3	YDR169C	ILS1	P09436	1072 aa	Known RBP	4.55	□□□□□ -1.68
STB3	YDR169C	APN1	P22936	367 aa		4.55	□□□□□ -1.68
STB3	YDR169C	ROX1	P25042	368 aa		4.55	□□□□□ -1.68
STB3	YDR169C	LRE1	P25579	583 aa	Known RBP	4.55	□□□□□ -1.68
STB3	YDR169C	UTH1	P36135	365 aa		4.55	□□□□□ -1.68
STB3	YDR169C	ATG12	P38316	186 aa		4.55	□□□□□ -1.68
STB3	YDR169C	VBA2	P38358	474 aa	Known RBP	4.55	□□□□□ -1.68
STB3	YDR169C	LTP1	P40347	161 aa		4.55	□□□□□ -1.68
STB3	YDR169C	JEM1	P40358	645 aa		4.55	□□□□□ -1.68
STB3	YDR169C	ARF3	P40994	183 aa	RIP-Chip data	4.55	□□□□□ -1.68	not detected
STB3	YDR169C	ASG7	P46993	209 aa		4.55	□□□□□ -1.68
STB3	YDR169C	CPR7	P47103	393 aa		4.55	□□□□□ -1.68
STB3	YDR169C	BPL1	P48445	690 aa	Predicted RBP	4.55	□□□□□ -1.68
STB3	YDR169C	ATP22	P50273	684 aa	Predicted RBP	4.55	□□□□□ -1.68
STB3	YDR169C	YSA1	Q01976	231 aa		4.55	□□□□□ -1.68
STB3	YDR169C	MTG1	Q03151	367 aa	Predicted RBP	4.55	□□□□□ -1.68
STB3	YDR169C	YML122C	Q03207	126 aa		4.55	□□□□□ -1.68
STB3	YDR169C	GTB1	Q04924	702 aa		4.55	□□□□□ -1.68
STB3	YDR169C	RLP24	Q07915	199 aa	Known RBP	4.55	□□□□□ -1.68
STB3	YDR169C	YPL191C	Q08930	360 aa		4.55	□□□□□ -1.68
STB3	YDR169C	PRP8	P33334	2413 aa	Known RBP	4.54	□□□□□ -1.68
STB3	YDR169C	GCN4	P03069	281 aa		4.54	□□□□□ -1.68
STB3	YDR169C	BI2	P03873	423 aa		4.54	□□□□□ -1.68
STB3	YDR169C	MDM10	P18409	493 aa		4.54	□□□□□ -1.68
STB3	YDR169C	KRR1	P25586	316 aa	Predicted RBP	4.54	□□□□□ -1.68
STB3	YDR169C	CSE1	P33307	960 aa		4.54	□□□□□ -1.68
STB3	YDR169C	SRX1	P36077	127 aa		4.54	□□□□□ -1.68
STB3	YDR169C	IMD2	P38697	523 aa	Known RBP	4.54	□□□□□ -1.68
STB3	YDR169C	WSC4	P38739	605 aa		4.54	□□□□□ -1.68
STB3	YDR169C	PSD1	P39006	500 aa		4.54	□□□□□ -1.68
STB3	YDR169C	HEM14	P40012	539 aa		4.54	□□□□□ -1.68
STB3	YDR169C	OSW5	P40219	148 aa		4.54	□□□□□ -1.68
STB3	YDR169C	UBP7	P40453	1071 aa		4.54	□□□□□ -1.68
STB3	YDR169C	UFE1	P41834	346 aa		4.54	□□□□□ -1.68
STB3	YDR169C	IMD3	P50095	523 aa	Known RBP	4.54	□□□□□ -1.68
STB3	YDR169C	VPS75	P53853	264 aa		4.54	□□□□□ -1.68
STB3	YDR169C	YAT1	P80235	687 aa		4.54	□□□□□ -1.68
STB3	YDR169C	RPA49	Q01080	415 aa	Predicted RBP	4.54	□□□□□ -1.68
STB3	YDR169C	PIR3	Q03180	325 aa		4.54	□□□□□ -1.68
STB3	YDR169C	YDR131C	Q03899	556 aa		4.54	□□□□□ -1.68
STB3	YDR169C	PPM1	Q04081	328 aa		4.54	□□□□□ -1.68
STB3	YDR169C	CIR2	Q08822	631 aa		4.54	□□□□□ -1.68
STB3	YDR169C	POL2	P21951	2222 aa	Known RBP	4.54	□□□□□ -1.68
STB3	YDR169C	MAK32	P23060	363 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms