RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W KAP95Q06142 861 aaKnown RBP2.14□□□□□ -2.07
UBP1YDL122W ENT4Q07872 247 aa2.14□□□□□ -2.07
UBP1YDL122W VHS3Q08438 674 aa2.14□□□□□ -2.07
UBP1YDL122W PEX11Q12462 236 aa2.14□□□□□ -2.07
UBP1YDL122W FUM1P08417 488 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W CMP2P14747 604 aa2.13□□□□□ -2.07
UBP1YDL122W MET8P15807 274 aa2.13□□□□□ -2.07
UBP1YDL122W APL1P27351 700 aa2.13□□□□□ -2.07
UBP1YDL122W MSP1P28737 362 aa2.13□□□□□ -2.07
UBP1YDL122W IML3P38265 245 aa2.13□□□□□ -2.07
UBP1YDL122W AIM3P38266 947 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W IFA38P38286 347 aa2.13□□□□□ -2.07
UBP1YDL122W YLF2P38746 405 aa2.13□□□□□ -2.07
UBP1YDL122W APE4P38821 490 aa2.13□□□□□ -2.07
UBP1YDL122W MAD2P40958 196 aa2.13□□□□□ -2.07
UBP1YDL122W CUP9P41817 306 aa2.13□□□□□ -2.07
UBP1YDL122W IRC6P43615 237 aa2.13□□□□□ -2.07
UBP1YDL122W STU2P46675 888 aa2.13□□□□□ -2.07
UBP1YDL122W SPT20P50875 604 aa2.13□□□□□ -2.07
UBP1YDL122W LCL3P53153 274 aa2.13□□□□□ -2.07
UBP1YDL122W YAP1802P53309 568 aa2.13□□□□□ -2.07
UBP1YDL122W YPS7Q06325 596 aa2.13□□□□□ -2.07
UBP1YDL122W IWR1Q07532 353 aaPredicted RBP2.13□□□□□ -2.07
UBP1YDL122W RLP24Q07915 199 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W YLR040CQ07988 224 aa2.13□□□□□ -2.07
UBP1YDL122W TRM8Q12009 286 aa2.13□□□□□ -2.07
UBP1YDL122W BAG7Q12128 409 aa2.13□□□□□ -2.07
UBP1YDL122W DBP10Q12389 995 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W VPS5Q92331 675 aa2.13□□□□□ -2.07
UBP1YDL122W HSP82P02829 709 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W TUB1P09733 447 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W KIN2P13186 1147 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W MRPL8P22353 238 aa2.13□□□□□ -2.07
UBP1YDL122W TEF4P36008 412 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W LRP1P38801 184 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W TRM9P49957 279 aa2.13□□□□□ -2.07
UBP1YDL122W YGR250CP53316 781 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W TIM10P87108 93 aa2.13□□□□□ -2.07
UBP1YDL122W INA17Q02888 182 aa2.13□□□□□ -2.07
UBP1YDL122W TAF11Q04226 346 aa2.13□□□□□ -2.07
UBP1YDL122W TRI1Q05024 226 aa2.13□□□□□ -2.07
UBP1YDL122W DIS3Q08162 1001 aaKnown RBP2.13□□□□□ -2.07
UBP1YDL122W IRC13Q08630 104 aa2.13□□□□□ -2.07
UBP1YDL122W BUD7Q08754 746 aa2.13□□□□□ -2.07
UBP1YDL122W NCE102Q12207 173 aaRIP-Chip data2.13□□□□□ -2.07not detected
UBP1YDL122W CAR1P00812 333 aaKnown RBP2.12□□□□□ -2.07
UBP1YDL122W SPO16P17122 198 aa2.12□□□□□ -2.07
UBP1YDL122W YCK1P23291 538 aa2.12□□□□□ -2.07
UBP1YDL122W PMT2P31382 759 aa2.12□□□□□ -2.07
UBP1YDL122W AIM26P32858 118 aa2.12□□□□□ -2.07
UBP1YDL122W UGP1P32861 499 aaKnown RBP2.12□□□□□ -2.07
UBP1YDL122W UBC6P33296 250 aaPredicted RBP2.12□□□□□ -2.07
UBP1YDL122W CNS1P33313 385 aa2.12□□□□□ -2.07
UBP1YDL122W YBR138CP38277 524 aa2.12□□□□□ -2.07
UBP1YDL122W LYS1P38998 373 aaRIP-Chip data2.12□□□□□ -2.07not detected
UBP1YDL122W YMR144WP40214 342 aaKnown RBP2.12□□□□□ -2.07
UBP1YDL122W XBP1P40489 647 aa2.12□□□□□ -2.07
UBP1YDL122W PRM2P40534 656 aa2.12□□□□□ -2.07
UBP1YDL122W AMA1P50082 593 aa2.12□□□□□ -2.07
UBP1YDL122W MND1P53102 219 aa2.12□□□□□ -2.07
UBP1YDL122W ARE2P53629 642 aaKnown RBP2.12□□□□□ -2.07
UBP1YDL122W YNR071CP53757 342 aa2.12□□□□□ -2.07
UBP1YDL122W YDR209CQ03480 137 aa2.12□□□□□ -2.07
UBP1YDL122W SNO4Q04902 237 aa2.12□□□□□ -2.07
UBP1YDL122W TAF9Q05027 157 aa2.12□□□□□ -2.07
UBP1YDL122W GRX8Q05926 109 aa2.12□□□□□ -2.07
UBP1YDL122W STP4Q07351 490 aa2.12□□□□□ -2.07
UBP1YDL122W CDC45Q08032 650 aa2.12□□□□□ -2.07
UBP1YDL122W ABP140Q08641 628 aaKnown RBP2.12□□□□□ -2.07
UBP1YDL122W HSP33Q08914 237 aaKnown RBP2.12□□□□□ -2.07
UBP1YDL122W HSP32Q08992 237 aa2.12□□□□□ -2.07
UBP1YDL122W HOS1Q12214 470 aa2.12□□□□□ -2.07
UBP1YDL122W YOR032W-AQ8TGS1 66 aa2.12□□□□□ -2.07
UBP1YDL122W PMA2P19657 947 aa2.12□□□□□ -2.07
UBP1YDL122W YIH1P25637 258 aa2.12□□□□□ -2.07
UBP1YDL122W SRB5P32585 307 aa2.12□□□□□ -2.07
UBP1YDL122W MTR2P34232 184 aaKnown RBP2.12□□□□□ -2.07
UBP1YDL122W PHO11P35842 467 aa2.12□□□□□ -2.07
UBP1YDL122W PHO12P38693 467 aa2.12□□□□□ -2.07
UBP1YDL122W PZF1P39933 429 aa2.12□□□□□ -2.07
UBP1YDL122W ZRG8P40021 1076 aa2.12□□□□□ -2.07
UBP1YDL122W GDS1P41913 522 aa2.12□□□□□ -2.07
UBP1YDL122W YJL107CP42947 387 aa2.12□□□□□ -2.07
UBP1YDL122W COX18P53239 316 aa2.12□□□□□ -2.07
UBP1YDL122W ZRT2Q12436 422 aa2.12□□□□□ -2.07
UBP1YDL122W NBL1Q3E7Y6 73 aa2.12□□□□□ -2.07
UBP1YDL122W PNO1Q99216 274 aaKnown RBP2.12□□□□□ -2.07
UBP1YDL122W RPS13P05756 151 aaKnown RBP2.11□□□□□ -2.07
UBP1YDL122W UBA1P22515 1024 aaKnown RBP2.11□□□□□ -2.07
UBP1YDL122W CWH43P25618 953 aa2.11□□□□□ -2.07
UBP1YDL122W DBF4P32325 704 aa2.11□□□□□ -2.07
UBP1YDL122W BYE1P36106 594 aa2.11□□□□□ -2.07
UBP1YDL122W SET3P36124 751 aa2.11□□□□□ -2.07
UBP1YDL122W UBA4P38820 440 aa2.11□□□□□ -2.07
UBP1YDL122W CTF8P38877 133 aa2.11□□□□□ -2.07
UBP1YDL122W PRM9P39551 298 aa2.11□□□□□ -2.07
UBP1YDL122W TPA1P40032 644 aaKnown RBP2.11□□□□□ -2.07
UBP1YDL122W ARF3P40994 183 aaRIP-Chip data2.11□□□□□ -2.07not detected
UBP1YDL122W PXA1P41909 870 aa2.11□□□□□ -2.07
UBP1YDL122W CIR1P42940 261 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms