RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	COR1	P07256	457 aa		4.26	□□□□□ -1.73
UBS1	YBR165W	MRE11	P32829	692 aa		4.26	□□□□□ -1.73
UBS1	YBR165W	MBB1	P39534	108 aa		4.26	□□□□□ -1.73
UBS1	YBR165W	TMA108	P40462	946 aa		4.26	□□□□□ -1.73
UBS1	YBR165W	VPS75	P53853	264 aa		4.26	□□□□□ -1.73
UBS1	YBR165W	SLG1	P54867	378 aa		4.26	□□□□□ -1.73
UBS1	YBR165W	YER078W-A	Q3E7A2	54 aa		4.26	□□□□□ -1.73
UBS1	YBR165W	GAL80	P04387	435 aa		4.25	□□□□□ -1.73
UBS1	YBR165W	REV1	P12689	985 aa		4.25	□□□□□ -1.73
UBS1	YBR165W	FUN19	P28003	413 aa	Predicted RBP	4.25	□□□□□ -1.73
UBS1	YBR165W	YME1	P32795	747 aa		4.25	□□□□□ -1.73
UBS1	YBR165W	SWH1	P35845	1188 aa		4.25	□□□□□ -1.73
UBS1	YBR165W	REG2	P38232	338 aa		4.25	□□□□□ -1.73
UBS1	YBR165W	MKT1	P40850	830 aa	Known RBP	4.25	□□□□□ -1.73
UBS1	YBR165W	RKM5	Q12367	367 aa		4.25	□□□□□ -1.73
UBS1	YBR165W	BUB3	P26449	341 aa		4.24	□□□□□ -1.73
UBS1	YBR165W	ERP2	P39704	215 aa		4.24	□□□□□ -1.73
UBS1	YBR165W	FAU1	P40099	211 aa		4.24	□□□□□ -1.73
UBS1	YBR165W	MET28	P40573	187 aa		4.24	□□□□□ -1.73
UBS1	YBR165W	IMH1	Q06704	911 aa	Known RBP	4.24	□□□□□ -1.73
UBS1	YBR165W	MES1	P00958	751 aa	Known RBP	4.23	□□□□□ -1.73
UBS1	YBR165W	NOP1	P15646	327 aa	Known RBP	4.23	□□□□□ -1.73
UBS1	YBR165W	IMP2'	P32351	346 aa		4.23	□□□□□ -1.73
UBS1	YBR165W	ATP11	P32453	318 aa		4.23	□□□□□ -1.73
UBS1	YBR165W	GCD10	P41814	478 aa		4.23	□□□□□ -1.73
UBS1	YBR165W	URB2	P47108	1174 aa		4.23	□□□□□ -1.73
UBS1	YBR165W	ARK1	P53974	638 aa		4.23	□□□□□ -1.73
UBS1	YBR165W	MFB1	Q04922	465 aa		4.23	□□□□□ -1.73
UBS1	YBR165W	GCN4	P03069	281 aa		4.22	□□□□□ -1.73
UBS1	YBR165W	HIP1	P06775	603 aa		4.22	□□□□□ -1.73
UBS1	YBR165W	PEP3	P27801	918 aa		4.22	□□□□□ -1.73
UBS1	YBR165W	SHE10	P53075	577 aa		4.22	□□□□□ -1.73
UBS1	YBR165W	ARE2	P53629	642 aa	Known RBP	4.22	□□□□□ -1.73
UBS1	YBR165W	SEC39	Q12745	709 aa		4.22	□□□□□ -1.73
UBS1	YBR165W	RRP12	Q12754	1228 aa	Known RBP	4.22	□□□□□ -1.73
UBS1	YBR165W	YDL007C-A	Q2V2Q0	85 aa		4.22	□□□□□ -1.73
UBS1	YBR165W	RAV1	P47104	1357 aa		4.22	□□□□□ -1.73
UBS1	YBR165W	SPT15	P13393	240 aa	Known RBP	4.21	□□□□□ -1.74
UBS1	YBR165W	CPR1	P14832	162 aa	Known RBP	4.21	□□□□□ -1.74
UBS1	YBR165W	YMR147W	P40218	223 aa	Known RBP	4.21	□□□□□ -1.74
UBS1	YBR165W	RRT5	P43607	289 aa		4.21	□□□□□ -1.74
UBS1	YBR165W	PET130	P47065	347 aa		4.21	□□□□□ -1.74
UBS1	YBR165W	CAF40	P53829	373 aa		4.21	□□□□□ -1.74
UBS1	YBR165W	RPL31B	P0C2H9	113 aa	Known RBP	4.2	□□□□□ -1.74
UBS1	YBR165W	GFD2	P25370	566 aa	Known RBP	4.2	□□□□□ -1.74
UBS1	YBR165W	NDI1	P32340	513 aa		4.2	□□□□□ -1.74
UBS1	YBR165W	MRP4	P32902	394 aa		4.2	□□□□□ -1.74
UBS1	YBR165W	SRO77	P38163	1010 aa		4.2	□□□□□ -1.74
UBS1	YBR165W	YBR225W	P38321	900 aa		4.2	□□□□□ -1.74
UBS1	YBR165W	KEL1	P38853	1164 aa	Known RBP	4.2	□□□□□ -1.74
UBS1	YBR165W	SYG1	P40528	902 aa		4.2	□□□□□ -1.74
UBS1	YBR165W	OGG1	P53397	376 aa	Predicted RBP	4.2	□□□□□ -1.74
UBS1	YBR165W	PIR3	Q03180	325 aa		4.2	□□□□□ -1.74
UBS1	YBR165W	HEL2	Q05580	639 aa	Known RBP	4.2	□□□□□ -1.74
UBS1	YBR165W	FOB1	O13329	566 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	MET8	P15807	274 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	HEM15	P16622	393 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	OCA4	P25366	362 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	LDB16	P25587	256 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	FRE2	P36033	711 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	RFS1	P38234	210 aa	Known RBP	4.19	□□□□□ -1.74
UBS1	YBR165W	YEL057C	P39983	233 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	ART5	P53244	586 aa	Known RBP	4.19	□□□□□ -1.74
UBS1	YBR165W	CAF130	P53280	1122 aa	Predicted RBP	4.19	□□□□□ -1.74
UBS1	YBR165W	BTN2	P53286	410 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	TAP42	Q04372	366 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	RRN11	Q04712	507 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	ERV2	Q12284	196 aa		4.19	□□□□□ -1.74
UBS1	YBR165W	CRM1	P30822	1084 aa	Known RBP	4.18	□□□□□ -1.74
UBS1	YBR165W	RSM22	P36056	628 aa		4.18	□□□□□ -1.74
UBS1	YBR165W	AVT4	P50944	713 aa		4.18	□□□□□ -1.74
UBS1	YBR165W	TWF1	P53250	332 aa		4.18	□□□□□ -1.74
UBS1	YBR165W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
UBS1	YBR165W	YOR387C	Q08910	206 aa		4.18	□□□□□ -1.74
UBS1	YBR165W	CHS1	P08004	1131 aa		4.17	□□□□□ -1.74
UBS1	YBR165W	GLC7	P32598	312 aa	Known RBP	4.17	□□□□□ -1.74
UBS1	YBR165W	SEC66	P33754	206 aa		4.17	□□□□□ -1.74
UBS1	YBR165W	RMD8	P43620	662 aa		4.17	□□□□□ -1.74
UBS1	YBR165W	PDS5	Q04264	1277 aa		4.17	□□□□□ -1.74
UBS1	YBR165W	YBL059W	P34224	193 aa		4.16	□□□□□ -1.74
UBS1	YBR165W	MRPL4	P36517	319 aa		4.16	□□□□□ -1.74
UBS1	YBR165W	POP1	P41812	875 aa		4.16	□□□□□ -1.74
UBS1	YBR165W	OCA1	P50946	238 aa	Predicted RBP	4.16	□□□□□ -1.74
UBS1	YBR165W	YGL108C	P53139	140 aa		4.16	□□□□□ -1.74
UBS1	YBR165W	ELP3	Q02908	557 aa	Known RBP	4.16	□□□□□ -1.74
UBS1	YBR165W	ODC1	Q03028	310 aa		4.16	□□□□□ -1.74
UBS1	YBR165W	SOV1	Q04748	898 aa		4.16	□□□□□ -1.74
UBS1	YBR165W	MRD1	Q06106	887 aa	Known RBP	4.16	□□□□□ -1.74
UBS1	YBR165W	RRD2	Q12461	358 aa		4.16	□□□□□ -1.74
UBS1	YBR165W	SUP35	P05453	685 aa	Known RBP	4.15	□□□□□ -1.75
UBS1	YBR165W	LEU4	P06208	619 aa	Known RBP	4.15	□□□□□ -1.75
UBS1	YBR165W	NAM9	P27929	486 aa		4.15	□□□□□ -1.75
UBS1	YBR165W	YIM1	P28625	365 aa		4.15	□□□□□ -1.75
UBS1	YBR165W	DEG1	P31115	442 aa	Known RBP	4.15	□□□□□ -1.75
UBS1	YBR165W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
UBS1	YBR165W	CST26	P38226	397 aa		4.15	□□□□□ -1.75
UBS1	YBR165W	DOT5	P40553	215 aa		4.15	□□□□□ -1.75
UBS1	YBR165W	YDR239C	Q03780	787 aa		4.15	□□□□□ -1.75
UBS1	YBR165W	PBA1	Q05778	276 aa		4.15	□□□□□ -1.75
UBS1	YBR165W	ESA1	Q08649	445 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms