RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 GJB4Q9NTQ9 266 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 FOXD4L1Q9NU39 408 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 CNPY2Q9Y2B0 182 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 MYCP01106 439 aaPredicted RBP17.44■□□□□ 0.38
PAX6-268ENST00000640287 GJB2P29033 226 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 PDE4DQ08499 809 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 TRIM32Q13049 653 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 CUL4AQ13619 759 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 JAKMIP3Q5VZ66 844 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 FAM177A1Q8N128 213 aaPredicted RBP17.44■□□□□ 0.38
PAX6-268ENST00000640287 MSL3Q8N5Y2 521 aaKnown RBP17.44■□□□□ 0.38
PAX6-268ENST00000640287 SHISA4Q96DD7 197 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 C8orf76Q96K31 380 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 EHMT1Q9H9B1 1298 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 PXMP2Q9NR77 195 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 PCDHA4Q9UN74 947 aa17.44■□□□□ 0.38
PAX6-268ENST00000640287 DDX49Q9Y6V7 483 aaKnown RBP17.44■□□□□ 0.38
PAX6-268ENST00000640287 PLXNA1Q9UIW2 1896 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 CENPFP49454 3210 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
PAX6-268ENST00000640287 GALNT17Q6IS24 598 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 MAMDC4Q6UXC1 1216 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 TEX2Q8IWB9 1127 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 PGBD1Q96JS3 809 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 BRMS1Q9HCU9 246 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 TMEM260Q9NX78 707 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.43■□□□□ 0.38
PAX6-268ENST00000640287 ASTN1O14525 1302 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 SYNGAP1Q96PV0 1343 aa17.43■□□□□ 0.38
PAX6-268ENST00000640287 MYCLP12524 364 aaPredicted RBP17.42■□□□□ 0.38
PAX6-268ENST00000640287 AP3B2Q13367 1082 aa17.42■□□□□ 0.38
PAX6-268ENST00000640287 BECN1Q14457 450 aa17.42■□□□□ 0.38
PAX6-268ENST00000640287 BLIDQ8IZY5 108 aa17.42■□□□□ 0.38
PAX6-268ENST00000640287 RASGRP4Q8TDF6 673 aa17.42■□□□□ 0.38
PAX6-268ENST00000640287 PHF20Q9BVI0 1012 aa17.42■□□□□ 0.38
PAX6-268ENST00000640287 ZHX1Q9UKY1 873 aaPredicted RBP17.42■□□□□ 0.38
PAX6-268ENST00000640287 PCDHA6Q9UN73 950 aa17.42■□□□□ 0.38
PAX6-268ENST00000640287 PCDHA8Q9Y5H6 950 aa17.42■□□□□ 0.38
PAX6-268ENST00000640287 LOC102724159A0A0B4J2E5 919 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 FOSP01100 380 aaPredicted RBP17.41■□□□□ 0.38
PAX6-268ENST00000640287 CNGA1P29973 690 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 CACNB2Q08289 660 aaPredicted RBP17.41■□□□□ 0.38
PAX6-268ENST00000640287 PGM5Q15124 567 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 PWP2Q15269 919 aaKnown RBP17.41■□□□□ 0.38
PAX6-268ENST00000640287 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
PAX6-268ENST00000640287 PRAMEF19Q5SWL8 479 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 KRT40Q6A162 431 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 EEPD1Q7L9B9 569 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 IWS1Q96ST2 819 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 PDCD2LQ9BRP1 358 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 ANO3Q9BYT9 981 aa17.41■□□□□ 0.38
PAX6-268ENST00000640287 LCTP09848 1927 aa17.4■□□□□ 0.38
PAX6-268ENST00000640287 NR3C2P08235 984 aa17.4■□□□□ 0.38
PAX6-268ENST00000640287 CCND2P30279 289 aa17.4■□□□□ 0.38
PAX6-268ENST00000640287 KRT2P35908 639 aa17.4■□□□□ 0.38
PAX6-268ENST00000640287 CLK2P49760 499 aaKnown RBP17.4■□□□□ 0.38
PAX6-268ENST00000640287 STXBP2Q15833 593 aa17.4■□□□□ 0.38
PAX6-268ENST00000640287 MCTP2Q6DN12 878 aa17.4■□□□□ 0.38
PAX6-268ENST00000640287 FBXO16Q8IX29 292 aaPredicted RBP17.4■□□□□ 0.38
PAX6-268ENST00000640287 DAGLBQ8NCG7 672 aa17.4■□□□□ 0.38
PAX6-268ENST00000640287 INTS4Q96HW7 963 aaKnown RBP17.4■□□□□ 0.38
PAX6-268ENST00000640287 H3BQV1 296 aa17.39■□□□□ 0.37
PAX6-268ENST00000640287 ADAMTS3O15072 1205 aa17.39■□□□□ 0.37
PAX6-268ENST00000640287 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
PAX6-268ENST00000640287 MMP1P03956 469 aa17.39■□□□□ 0.37
PAX6-268ENST00000640287 GNL2Q13823 731 aaKnown RBP17.39■□□□□ 0.37
PAX6-268ENST00000640287 IFFO2Q5TF58 517 aa17.39■□□□□ 0.37
PAX6-268ENST00000640287 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
PAX6-268ENST00000640287 IL31RAQ8NI17 732 aa17.39■□□□□ 0.37
PAX6-268ENST00000640287 ARMC5Q96C12 935 aa17.39■□□□□ 0.37
PAX6-268ENST00000640287 ABHD16BQ9H3Z7 469 aa17.39■□□□□ 0.37
PAX6-268ENST00000640287 HMX1Q9NP08 348 aaPredicted RBP17.39■□□□□ 0.37
PAX6-268ENST00000640287 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
PAX6-268ENST00000640287 CCDC194A0A1B0GVG4 234 aa17.38■□□□□ 0.37
PAX6-268ENST00000640287 EDNRBP24530 442 aa17.38■□□□□ 0.37
PAX6-268ENST00000640287 ACVR2BQ13705 512 aa17.38■□□□□ 0.37
PAX6-268ENST00000640287 TNS4Q8IZW8 715 aa17.38■□□□□ 0.37
PAX6-268ENST00000640287 MORC4Q8TE76 937 aa17.38■□□□□ 0.37
PAX6-268ENST00000640287 ZNF333Q96JL9 665 aa17.38■□□□□ 0.37
PAX6-268ENST00000640287 NRBP1Q9UHY1 535 aa17.38■□□□□ 0.37
PAX6-268ENST00000640287 FRMPD4Q14CM0 1322 aa17.38■□□□□ 0.37
PAX6-268ENST00000640287 EIF3JO75822 258 aaKnown RBP17.37■□□□□ 0.37
PAX6-268ENST00000640287 IGHA2P01877 340 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 CYBAP13498 195 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 CCND3P30281 292 aaPredicted RBP17.37■□□□□ 0.37
PAX6-268ENST00000640287 MTFR1Q15390 333 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 NPY5RQ15761 445 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 MAP3K21Q5TCX8 1036 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 LARP1BQ659C4 914 aaKnown RBP17.37■□□□□ 0.37
PAX6-268ENST00000640287 VSIG10LQ86VR7 867 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 DIS3L2Q8IYB7 885 aaKnown RBP17.37■□□□□ 0.37
PAX6-268ENST00000640287 FBXO18Q8NFZ0 1043 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 ZFP91Q96JP5 570 aaPredicted RBP17.37■□□□□ 0.37
PAX6-268ENST00000640287 RNF208Q9H0X6 261 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 UNC93B1Q9H1C4 597 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 VTA1Q9NP79 307 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 CCL5P13501 91 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 ZNF76P36508 570 aa17.37■□□□□ 0.37
PAX6-268ENST00000640287 ANP32AP39687 249 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms