RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 FGRP09769 529 aa18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 PURAQ00577 322 aaKnown RBP18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 IMMTQ16891 758 aaKnown RBP18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 BRDTQ58F21 947 aaPredicted RBP18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 IL27Q8NEV9 243 aa18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 ASB2Q96Q27 587 aa18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 MTG1Q9BT17 334 aaPredicted RBP18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 PDHBP11177 359 aa18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 PCP11498 1178 aaKnown RBP18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 MRPS5P82675 430 aaKnown RBP18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 TTLL4Q14679 1199 aa18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 NBPF20Q3BBV1 942 aa18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 CLEC4DQ8WXI8 215 aa18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 COPS5Q92905 334 aa18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 RNF41Q9H4P4 317 aaPredicted RBP18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 TCP11L1Q9NUJ3 509 aa18.19■□□□□ 0.5
SNRNP48-203ENST00000634363 RBM47A0AV96 593 aaKnown RBP18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 RPS6P62753 249 aaKnown RBP18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 PPP2R5BQ15173 497 aa18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 USH1GQ495M9 461 aa18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 MFSD6Q6ZSS7 791 aa18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 VWCEQ96DN2 955 aa18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 ZKSCAN3Q9BRR0 538 aa18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 ESYT1Q9BSJ8 1104 aa18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 PCDHA11Q9Y5I1 949 aa18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 LAMA4Q16363 1823 aa18.18■□□□□ 0.5
SNRNP48-203ENST00000634363 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 TXNP10599 105 aaKnown RBP18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 ZNF543Q08ER8 600 aa18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 RETREG2Q8NC44 543 aa18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 ADAMTS19Q8TE59 1207 aa18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 SCFD2Q8WU76 684 aa18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 TTC14Q96N46 770 aa18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 FTOQ9C0B1 505 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 TSPYL2Q9H2G4 693 aaPredicted RBP18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 CERS4Q9HA82 394 aa18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
SNRNP48-203ENST00000634363 RFXAPO00287 272 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 NKRFO15226 690 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 PFKMP08237 780 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 GOLGA8HP0CJ92 632 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 ACTN1P12814 892 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 SKIV2LQ15477 1246 aaKnown RBP18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 TMEM67Q5HYA8 995 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 TBC1D10CQ8IV04 446 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 UBA5Q9GZZ9 404 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 CPVLQ9H3G5 476 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 PNMA2Q9UL42 364 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 NOD1Q9Y239 953 aa18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 TCF20Q9UGU0 1960 aaKnown RBP18.16■□□□□ 0.5
SNRNP48-203ENST00000634363 B4DLN1 442 aa18.15■□□□□ 0.5
SNRNP48-203ENST00000634363 KPNA6O60684 536 aa18.15■□□□□ 0.5
SNRNP48-203ENST00000634363 CA3P07451 260 aa18.15■□□□□ 0.5
SNRNP48-203ENST00000634363 MRPL12P52815 198 aaKnown RBP18.15■□□□□ 0.5
SNRNP48-203ENST00000634363 PTH1RQ03431 593 aa18.15■□□□□ 0.5
SNRNP48-203ENST00000634363 DNERQ8NFT8 737 aa18.15■□□□□ 0.5
SNRNP48-203ENST00000634363 ANO2Q9NQ90 1003 aa18.15■□□□□ 0.5
SNRNP48-203ENST00000634363 TRIP12Q14669 1992 aaPredicted RBP18.15■□□□□ 0.5
SNRNP48-203ENST00000634363 IQCF3P0C7M6 154 aa18.14■□□□□ 0.49
SNRNP48-203ENST00000634363 COL9A1P20849 921 aa18.14■□□□□ 0.49
SNRNP48-203ENST00000634363 NT5C2P49902 561 aa18.14■□□□□ 0.49
SNRNP48-203ENST00000634363 NFRKBQ6P4R8 1299 aa18.14■□□□□ 0.49
SNRNP48-203ENST00000634363 ESR2Q92731 530 aa18.14■□□□□ 0.49
SNRNP48-203ENST00000634363 UHRF1Q96T88 793 aaPredicted RBP18.14■□□□□ 0.49
SNRNP48-203ENST00000634363 A6NJR5 290 aa18.13■□□□□ 0.49
SNRNP48-203ENST00000634363 SEPT14Q6ZU15 432 aa18.13■□□□□ 0.49
SNRNP48-203ENST00000634363 CHST3Q7LGC8 479 aa18.13■□□□□ 0.49
SNRNP48-203ENST00000634363 TBC1D5Q92609 795 aa18.13■□□□□ 0.49
SNRNP48-203ENST00000634363 NEDD4P46934 1319 aa18.13■□□□□ 0.49
SNRNP48-203ENST00000634363 SCN10AQ9Y5Y9 1956 aa18.13■□□□□ 0.49
SNRNP48-203ENST00000634363 ARIH2O95376 493 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 SNHG28P0DPA3 235 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 EDNRBP24530 442 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 RFC2P35250 354 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 TFF2Q03403 129 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 BFSP2Q13515 415 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 PTGISQ16647 500 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 LY6KQ17RY6 165 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 AFG1LQ8WV93 481 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 MAP4K1Q92918 833 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 TAAR1Q96RJ0 339 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 KRT23Q9C075 422 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 CNNM2Q9H8M5 875 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 RBM8AQ9Y5S9 174 aaKnown RBP18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 WDR19Q8NEZ3 1342 aa18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 SPTBN5Q9NRC6 3674 aaKnown RBP18.12■□□□□ 0.49
SNRNP48-203ENST00000634363 KIF28PB7ZC32 967 aa18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 PITPNM1O00562 1244 aa18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 GTPBP6O43824 516 aaPredicted RBP18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 DHX16O60231 1041 aaKnown RBP18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 PTPN11Q06124 597 aaPredicted RBP18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 TRDNQ13061 729 aa18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 ARNTL2Q8WYA1 636 aa18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 NECAB3Q96P71 396 aaPredicted RBP18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 SLC9A7Q96T83 725 aa18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 LSG1Q9H089 658 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms