RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 ZNF296Q8WUU4 475 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 SOCS4Q8WXH5 440 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 USP6NLQ92738 828 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 CUL5Q93034 780 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 ERO1AQ96HE7 468 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 C8orf76Q96K31 380 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 TRIM47Q96LD4 638 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 MMP19Q99542 508 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 CYP39A1Q9NYL5 469 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 CASP8AP2Q9UKL3 1982 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 SMCHD1A6NHR9 2005 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 SMCO2A6NFE2 343 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 GCOM1H8Y6P7 765 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 HSP90AA1P07900 732 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 HOXC6P09630 235 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 POLR2MP0CAP2 368 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 HSPA8P11142 646 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 PDIA4P13667 645 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 PDCP20941 246 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 MRPL12P52815 198 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 RPS6P62753 249 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 CAP1Q01518 475 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 KCTD2Q14681 263 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 KRT40Q6A162 431 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 MCTP2Q6DN12 878 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 FAM133AQ8N9E0 248 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 BICD2Q8TD16 824 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 SYTL5Q8TDW5 730 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 PSTPIP2Q9H939 334 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 CWC22Q9HCG8 908 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 GJB4Q9NTQ9 266 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 GJD2Q9UKL4 321 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 PCDHA4Q9UN74 947 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 IVNS1ABPQ9Y6Y0 642 aa11.3□□□□□ -0.6
SOX2-OT-249ENST00000628810 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 TNPO2O14787 897 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 FOXN1O15353 648 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 CFBP00751 764 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 HSPA1AP0DMV8 641 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 HSPA1BP0DMV9 641 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 ADORA2AP29274 412 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 DDIT3P35638 169 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 PSMC4P43686 418 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 NLRP5P59047 1200 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 AP3B2Q13367 1082 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 BAATQ14032 418 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 TRIM29Q14134 588 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 KIF22Q14807 665 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 CCAR1Q8IX12 1150 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 BLIDQ8IZY5 108 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 REXO1Q8N1G1 1221 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 ANKRD35Q8N283 1001 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 CD99L2Q8TCZ2 262 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 TBC1D5Q92609 795 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 ARHGAP39Q9C0H5 1083 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 COL20A1Q9P218 1284 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 KCNJ14Q9UNX9 436 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 ASTN1O14525 1302 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 RPTORQ8N122 1335 aa11.29□□□□□ -0.6
SOX2-OT-249ENST00000628810 ADAMTS3O15072 1205 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 SLC34A2O95436 690 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 IGHA2P01877 340 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 SYT1P21579 422 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 KRT2P35908 639 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 CTCFP49711 727 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 MAP2K5Q13163 448 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 ARHGEF6Q15052 776 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 UBE2SQ16763 222 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 ZNF792Q3KQV3 632 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 WDR78Q5VTH9 848 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 LARP1BQ659C4 914 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 DNERQ8NFT8 737 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 FGD4Q96M96 766 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 APBA2Q99767 749 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 NUDT12Q9BQG2 462 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 FOXP1Q9H334 677 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 BRMS1Q9HCU9 246 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 TSKSQ9UJT2 592 aa11.28□□□□□ -0.6
SOX2-OT-249ENST00000628810 PLXNA1Q9UIW2 1896 aa11.27□□□□□ -0.6
SOX2-OT-249ENST00000628810 COBLO75128 1261 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 FOSP01100 380 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 XRCC5P13010 732 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 EDNRBP24530 442 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 U2AF2P26368 475 aaKnown RBP eCLIP11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 HOXA13P31271 388 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 RGS2P41220 211 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 PRMT2P55345 433 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 IRF5Q13568 498 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms