RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ADAMTS3O15072 1205 aa22.72■■□□□ 1.23
PDLIM2-221ENST00000622702 MYCP01106 439 aaPredicted RBP22.72■■□□□ 1.23
PDLIM2-221ENST00000622702 MCTP2Q6DN12 878 aa22.72■■□□□ 1.23
PDLIM2-221ENST00000622702 USP17L6PQ6QN14 398 aa22.72■■□□□ 1.23
PDLIM2-221ENST00000622702 ANKRD35Q8N283 1001 aa22.72■■□□□ 1.23
PDLIM2-221ENST00000622702 COBLO75128 1261 aa22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 HOXC6P09630 235 aa22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 BAATQ14032 418 aaPredicted RBP22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 CCL14Q16627 93 aa22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 UBE2SQ16763 222 aa22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 SLC30A10Q6XR72 485 aa22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 NPLOC4Q8TAT6 608 aa22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 OXER1Q8TDS5 423 aa22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 SYTL5Q8TDW5 730 aaPredicted RBP22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 TRIB2Q92519 343 aa22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 FOXP1Q9H334 677 aaPredicted RBP22.71■■□□□ 1.23
PDLIM2-221ENST00000622702 BRCA2P51587 3418 aa22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 BTBD18B2RXH4 712 aa22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 INHAP05111 366 aa22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 HOXA13P31271 388 aaPredicted RBP22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 UBXN2AP68543 259 aa22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 AP3B2Q13367 1082 aa22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 TRMT44Q8IYL2 757 aaKnown RBP22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 TNFRSF25Q93038 417 aa22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 CIZ1Q9ULV3 898 aaPredicted RBP22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 PCDHA6Q9UN73 950 aa22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 PCDHA8Q9Y5H6 950 aa22.7■■□□□ 1.22
PDLIM2-221ENST00000622702 DNAJC25-GNG10A0A024R161 153 aa22.69■■□□□ 1.22
PDLIM2-221ENST00000622702 FOSP01100 380 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-221ENST00000622702 HMGCRP04035 888 aa22.69■■□□□ 1.22
PDLIM2-221ENST00000622702 PGK2P07205 417 aa22.69■■□□□ 1.22
PDLIM2-221ENST00000622702 U2AF2P26368 475 aaKnown RBP eCLIP22.69■■□□□ 1.22
PDLIM2-221ENST00000622702 NR5A1Q13285 461 aa22.69■■□□□ 1.22
PDLIM2-221ENST00000622702 SLC5A4Q9NY91 659 aa22.69■■□□□ 1.22
PDLIM2-221ENST00000622702 TRIM32Q13049 653 aa22.68■■□□□ 1.22
PDLIM2-221ENST00000622702 PKP1Q13835 747 aa22.68■■□□□ 1.22
PDLIM2-221ENST00000622702 MTFR1Q15390 333 aa22.68■■□□□ 1.22
PDLIM2-221ENST00000622702 RASGRP4Q8TDF6 673 aa22.68■■□□□ 1.22
PDLIM2-221ENST00000622702 TMEM260Q9NX78 707 aa22.68■■□□□ 1.22
PDLIM2-221ENST00000622702 COL20A1Q9P218 1284 aa22.68■■□□□ 1.22
PDLIM2-221ENST00000622702 KIF28PB7ZC32 967 aa22.67■■□□□ 1.22
PDLIM2-221ENST00000622702 BRD1O95696 1058 aa22.67■■□□□ 1.22
PDLIM2-221ENST00000622702 NUCB2P80303 420 aa22.67■■□□□ 1.22
PDLIM2-221ENST00000622702 JAKMIP3Q5VZ66 844 aa22.67■■□□□ 1.22
PDLIM2-221ENST00000622702 MCTP1Q6DN14 999 aa22.67■■□□□ 1.22
PDLIM2-221ENST00000622702 KRT25Q7Z3Z0 450 aa22.67■■□□□ 1.22
PDLIM2-221ENST00000622702 FAM133AQ8N9E0 248 aa22.67■■□□□ 1.22
PDLIM2-221ENST00000622702 FLRT1Q9NZU1 646 aa22.67■■□□□ 1.22
PDLIM2-221ENST00000622702 PLXNA1Q9UIW2 1896 aa22.67■■□□□ 1.22
PDLIM2-221ENST00000622702 SPDYE3A6NKU9 549 aa22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 POTEB2H3BUK9 544 aa22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 ZSCAN22P10073 491 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 FCHSD1Q86WN1 690 aa22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 NOSTRINQ8IVI9 506 aa22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 CCL5P13501 91 aa22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 GNL2Q13823 731 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 ZNF792Q3KQV3 632 aa22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 MAML3Q96JK9 1138 aa22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 ANO3Q9BYT9 981 aa22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 ZDHHC9Q9Y397 364 aa22.66■■□□□ 1.22
PDLIM2-221ENST00000622702 FRMPD4Q14CM0 1322 aa22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 CCDC194A0A1B0GVG4 234 aa22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 SOX10P56693 466 aa22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 RESTQ13127 1097 aa22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 BRAPQ7Z569 592 aa22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 DNERQ8NFT8 737 aa22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 TAAR1Q96RJ0 339 aa22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 TMEM106CQ9BVX2 250 aa22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 UNC93B1Q9H1C4 597 aa22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 ZSCAN16Q9H4T2 348 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-221ENST00000622702 LCTP09848 1927 aa22.64■■□□□ 1.22
PDLIM2-221ENST00000622702 RPTORQ8N122 1335 aa22.64■■□□□ 1.22
PDLIM2-221ENST00000622702 PRKAR2AP13861 404 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 CNTN2Q02246 1040 aa22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 NONOQ15233 471 aaKnown RBP eCLIP22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 EARS2Q5JPH6 523 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 MFSD14CQ5VZR4 134 aa22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 OLFML2BQ68BL8 750 aa22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 FERMT3Q86UX7 667 aa22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 PGBD1Q96JS3 809 aa22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 RMDN3Q96TC7 470 aa22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 RNF208Q9H0X6 261 aa22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 EHMT1Q9H9B1 1298 aa22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 CHMP5Q9NZZ3 219 aa22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 ADD3Q9UEY8 706 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 DIS3Q9Y2L1 958 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-221ENST00000622702 F13A1P00488 732 aa22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 CYP2C19P33261 490 aa22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 SREBF1P36956 1147 aa22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 CACNB2Q08289 660 aaPredicted RBP22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 MAP3K21Q5TCX8 1036 aa22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 PIK3AP1Q6ZUJ8 805 aa22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 NSUN6Q8TEA1 469 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 CRYGNQ8WXF5 182 aa22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 FGD4Q96M96 766 aa22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 PURBQ96QR8 312 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 PXMP2Q9NR77 195 aa22.63■■□□□ 1.21
PDLIM2-221ENST00000622702 LOC102724159A0A0B4J2E5 919 aa22.62■■□□□ 1.21
PDLIM2-221ENST00000622702 SOWAHBA6NEL2 793 aa22.62■■□□□ 1.21
PDLIM2-221ENST00000622702 PWP2Q15269 919 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms